Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cinnamomi_20[genbank_20GCA_5F001314505.1_202015-10- 14] 6,270 sequences; 53,969,337 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq54 98.7 2e-15 >seq54 Length=76991 Score = 98.7 bits (108), Expect = 2e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||||| || || || |||||||| |||| ||||| || ||| | |||| Sbjct 56879 AAGACGCTGACCGGCAAGACGATCACGCTGGACGTGGAGCCGTCGGACTCGATCGACAAC 56938 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||||| || |||||||| || || || || ||| ||| || | || |||||| Sbjct 56939 GTGAAGCAGAAAATTCAAGACAAGGAGGGCATCCCGCCTGACCAGCAGCGTCTGATCTTC 56998 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| | || || || | || || ||| |||||| ||||||| ||||| Sbjct 56999 GCTGGCAAGCAGCTTGAGGACGGCCGCACGCTGAGCGACTACAACATCCAGAAGGAGTCG 57058 Query 206365 ACTCTTCACCTTGT 206378 ||||||||||| || Sbjct 57059 ACTCTTCACCTGGT 57072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181725859164670