Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cinnamomi_20[genbank_20GCA_5F001314505.1_202015-10- 14] 6,270 sequences; 53,969,337 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq507 113 4e-20 >seq507 Length=29800 Score = 113 bits (124), Expect = 4e-20 Identities = 134/180 (74%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 5340 CTCGCAGATGAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTCTTGGCCGAA 5399 |||| ||||||||||||||||||||| || ||| |||| |||| ||| ||||| Sbjct 14858 CTCGAGGATGAGCTGCGCCACGCGGTCCCCGCGCTGCACGGGGAAGTCCTC--GGCCGCG 14801 Query 5400 --GTTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCCCGCTCCC 5457 |||||| || | ||| |||| ||| || ||| |||| | ||| | |||||||| ||| Sbjct 14800 TGGTTGAACAGGATCACGCCCACGTTGCCGCGGTAGTCGGCGTCGATCACGCCCGCGCCC 14741 Query 5458 ACATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTAGCAGCCG 5517 || | ||| || || | ||| || || || | |||||||||||| ||||||||||| Sbjct 14740 GTGTCGATGAACTTCTTGAGCGCCAGGCCAGAGCGCGGCGCCACGCGCGCGTAGCAGCCG 14681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447776102797200