Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cinnamomi_20[genbank_20GCA_5F001314505.1_202015-10- 14] 6,270 sequences; 53,969,337 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq374 336 3e-86 seq5612 313 4e-79 seq84 232 1e-54 seq498 230 3e-54 seq748 163 4e-34 seq461 159 5e-33 seq21 159 5e-33 seq904 113 6e-19 seq403 113 6e-19 seq1134 98.7 1e-14 >seq374 Length=32324 Score = 336 bits (372), Expect = 3e-86 Identities = 441/599 (74%), Gaps = 14/599 (2%) Strand=Plus/Minus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 |||||| | ||| | ||||||||||| || || |||||||| |||| | || Sbjct 2220 GAGCCGTTCCTGGCGGCGAACCCGAACCGGTTCGTGCTGTTCCCGATCCAGGAGCACGAC 2161 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 | ||| | |||||| || |||||||||||||| || ||||| ||||||||| | ||||| Sbjct 2160 GTGTGGCAGATGTAC-AAGAAGGCCGAGGCCTCGTTCTGGACGGCCGAGGAGCTGGACCT 2102 Query 1455836 CGGCGC-CGAC---ACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCA 1455891 || || |||| | || |||||| | |||| ||| ||||||| ||||||| Sbjct 2101 -GGTGCACGACCTCAAGG---ACTGGGCGAACCTGACGGACAACGAGCGGTTCTTCATCA 2046 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||||| || || || || ||| || ||||| || || ||| ||||||||||||| Sbjct 2045 AGCACGTGCTGGCGTTCTT-CGCTGCGAGCGACGGTATTGTGAACGAGAACCTGGCCATG 1987 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||| | || || || || |||| ||||| || | || ||||| |||||||||||| Sbjct 1986 AACTTCAGCAATGAAGTGCAGGTGCCGGAGGCTCGCTGCTTCTACGGCTTCCAGATCGCC 1927 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 ||||| ||||||||||| || |||||||| ||||||||||| ||| |||||||| | Sbjct 1926 ATCGAGAACATCCACTCGGAGGTGTACTCGCTGCTGATCGACACGTACATCAAGGACGCC 1867 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 || |||||||||||||| | ||||| ||||| ||| | |||| |||| ||| || || Sbjct 1866 GTGGAGAAGGACCACCTGCTGCGCGCGATCGAGACGATCCCGTGCGTGAAGAAGAAAGCG 1807 Query 1456132 GACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCG 1456191 |||||||| | |||||| | || | | | ||| | | | ||||| || | | Sbjct 1806 CACTGGGCGCTCAAGTGGTGCGAC-CCGCGTGTGTCGTC-GTACCCGGAGCGTCTGCTGG 1749 Query 1456192 GCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCA 1456250 || |||| ||| |||||||| || ||||||||| |||||| ||||||| ||||||| Sbjct 1748 CGTTCGCCGCCGTGGAGGGCATTTTCTTCTCGGGCTCCTTCTGCTCCATCTTCTGGCTCA 1689 Query 1456251 AGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 ||||||||||||||||||| || | | |||| ||||| | ||||| || ||||| Sbjct 1688 AGAAGCGCGGCCTCATGCCTGG-CCTGAGCTTCTCGAACGAGCTGATCAGCCGTGACGA 1631 Score = 167 bits (184), Expect = 3e-35 Identities = 242/331 (73%), Gaps = 12/331 (4%) Strand=Plus/Minus Query 1456448 GGTTTGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCG-AC 1456506 ||| ||||| ||||| || || || | ||| | | ||| || ||||||| | || | Sbjct 1629 GGTATGCACACGGACTTCGCGTGCCTCATGTACTCCAAGCTGGTGAACAAGCTGCCGGAG 1570 Query 1456507 CGACGTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGA 1456566 | || | || | |||| | ||| || || | ||||||| | ||||| || |||| Sbjct 1569 AGCCGCGTGCACG-AGATTGTGCGCGACGCGGTGGTGATCGAGCACGAGTTCGTGCGCGA 1511 Query 1456567 GTCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAAT 1456626 ||||| || |||| ||| |||||||||||| | | |||||||||||||||||| || | Sbjct 1510 CTCGCTCCCTGTGGAGCTGATCGGCATGAACTCGGC-GCTCATGTGCCAGTACATCGAGT 1452 Query 1456627 TTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTAC--CG-GACGGC 1456683 | || |||||||| ||| | |||| || || | ||| |||| || || | Sbjct 1451 TC-GTGGCCGACCGTCTGTTGTACTCGCTGGG-TGTGCCAAAGATCTACAACGTGAAG-- 1396 Query 1456684 CAACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCG 1456743 ||||||||| |||||||| ||||||| ||| |||||||||||||||| |||||| Sbjct 1395 -AACCCGTTCGACTGGATGGACATGATCTCTCTCCAGGGCAAGACCAACTTCTTCGAGAA 1337 Query 1456744 CCGCGT-GGCGAGTACGCCAAGGCCGGCGTC 1456773 ||||| ||||||||| |||||||||||||| Sbjct 1336 GCGCGTGGGCGAGTACTCCAAGGCCGGCGTC 1306 >seq5612 Length=1235 Score = 313 bits (346), Expect = 4e-79 Identities = 439/602 (73%), Gaps = 17/602 (3%) Strand=Plus/Minus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 |||||| | || || ||| ||||||| || || ||||||| |||| | || Sbjct 1187 GAGCCGTTCCTAGTCGCGAACTCGAACCGGTTCGTGCTGTTCCTGATCCAGGAGCACGAC 1128 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 | ||| | || ||| || ||| |||||||||| || ||||| ||||||||| | |||| Sbjct 1127 GTGTGGCAGAT-TAC-AAGAAGACCGAGGCCTCGTTCTGGACGGCCGAGGAGCTGGACCA 1070 Query 1455836 CGGCGC-CGAC---ACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCA 1455891 || || |||| | || |||||| | || ||| ||||||| ||||||| Sbjct 1069 -GGTGCACGACCTCAAGG---ACTGGGCCAACCAGACGGACAACGAGCGGTTCTTCATCA 1014 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||||| || ||||| || |||||||||||| ||||||||| ||||||||||||| Sbjct 1013 AGCACGTGCTGGCCTTCTT-CGCCGCCAGCGACGGCATCGTGAACGAGAACCTGGCCATG 955 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||| | || || || || |||| |||| || | || ||||| |||||||||||| Sbjct 954 AACTTCAGCAACGAAGTGCAGGTGCCCGAGGTCCGCTGCTTCTACGGCTTCCAGATCGCC 895 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 ||||| ||||||||| | || |||||||| || || || |||||| |||||||| || Sbjct 894 ATCGAGAACATCCACGCCGAGGTGTACTCGCTGCTCATTGATACCTACATCAAGGACACG 835 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 | |||||| ||||||| | || |||||||| ||| | |||| || | ||| || || Sbjct 834 ATGGAGAAGAACCACCTGCTGCGTGCCATCGAGACGATCCCGTGCGTCAAGAAGAAAGCG 775 Query 1456132 GACTGGGCGATGAAGTGGATCAACAAG-GAGGGCCTCGACACTTTGCCGAGCGGCTCGTC 1456190 |||||||| | |||||| | || | ||| | ||| | | | ||||| || | Sbjct 774 CACTGGGCGCTCAAGTGGTGCGACCCGCGAGTG--TCGTC-GTACCCGGAGCGTCTGCTG 718 Query 1456191 GGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTC 1456249 | || || | ||| ||||||||||||||||||||| |||||| ||||||| |||||| Sbjct 717 GCGTTCGCTGCCGTGGAGGGCATCTTTTTCTCGGGCTCGTTCTGCTCCATCTTCTGGCTC 658 Query 1456250 AAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 |||||||||||||||||||| |||| | |||| ||||| | ||||| || ||||| Sbjct 657 AAGAAGCGCGGCCTCATGCCTGGTC-TGAGCTTCTCGAACGAGCTCATCAGCCGAGACGA 599 Query 1456310 AG 1456311 || Sbjct 598 AG 597 Score = 187 bits (206), Expect = 4e-41 Identities = 246/331 (74%), Gaps = 10/331 (3%) Strand=Plus/Minus Query 1456447 AGGTTTGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCG-TCGA 1456505 |||| ||||| ||||| || || || | ||| ||| |||||||||||||| | ||| Sbjct 598 AGGTATGCACACGGACTTCGCGTGCCTCATGTACTCGAAGCTCGTCAACAAGCTGCCCGA 539 Query 1456506 CCGACGTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCG 1456565 | || | || | ||||| | ||| || || | ||| ||| | ||||| || ||| Sbjct 538 AAGCCGCGTGCACG-AGATCGTGCGCGACGCGGTGGTGATTGAGCACGAGTTCGTGTGCG 480 Query 1456566 AGTCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAA 1456625 | |||||||| |||| |||||| ||||||||| | ||||||||||||||||||| | | Sbjct 479 ATTCGCTGCCTGTGGAGCTCATTGGCATGAAC-TCGGCGCTCATGTGCCAGTACATCG-A 422 Query 1456626 TTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGC-- 1456683 || || |||||||||||||| | || ||| | | ||| |||| ||| | Sbjct 421 GTTCGTGGCCGACCGCCTGCTGTACTCACTGGGC-GTGTCCAAGATCTAC--AACGTCAA 365 Query 1456684 CAACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCG 1456743 ||||||||| |||||||| |||||||||| |||||||||||||||| || ||| Sbjct 364 GAACCCGTTCGACTGGATGGACATGATCTCGCTGCAGGGCAAGACCAACTTCTTTGAGAA 305 Query 1456744 CCGCGT-GGCGAGTACGCCAAGGCCGGCGTC 1456773 ||||| ||||||||| |||||||||||||| Sbjct 304 GCGCGTGGGCGAGTACTCCAAGGCCGGCGTC 274 >seq84 Length=67297 Score = 232 bits (256), Expect = 1e-54 Identities = 333/463 (72%), Gaps = 6/463 (1%) Strand=Plus/Minus Query 332874 AGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGG 332933 ||||||||||||| || |||||||| | || |||||||| | | | ||| ||||||||| Sbjct 15480 AGCGCAGGATGGCGCAGCGGCTCTGGATGGGCTCGATGATCTTGGTCGAGTTGTTGCAGG 15421 Query 332934 CCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGG 332993 |||| || || ||||| || | | |||||||| || || ||||| |||| Sbjct 15420 CCAGCGCGAAGCGCGTGGTGGCCGAGAAGATCTCCATGGTGCGGCGCAGCGCCTGCTGGG 15361 Query 332994 CCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCA 333053 |||| | ||| | ||||||||||||| ||||| | |||||||||||| || | |||| Sbjct 15360 CCGCGGCCGTCATCGAGTCGGCCTCGTCCAGGATCACGATCTTGTGGCGGCCCGGGGGCA 15301 Query 333054 GATCAACCCTTTTCGAGGCGTGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGCT 333113 | ||| | | | ||| ||||| | ||||||| ||| | |||||| | Sbjct 15300 GCGTCACCTTCTGCTGCGCGAACATCTTGATCTTGCTGCGCACCGTGTCGATGCCGCGGT 15241 Query 333114 CGTCCGACGCGTTGAGTTCGAGCACGGCCT-CGTCG-GCGGCCGCACCCAAGAGGACGCG 333171 |||||||||||||||| || ||||| |||| | || || | ||| ||| || |||| Sbjct 15240 CGTCCGACGCGTTGAGCTCCAGCACCGCCTGCTTCATGCTGGCGC--CCAGCAGCTCGCG 15183 Query 333172 CGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGGCGGACCCGCCAGCAAGAGGTT 333231 |||||||||| |||||||||||||||||||||||| ||||| |||| ||| | ||||| Sbjct 15182 CGCCAGGCACAGGATGCTCGTGGTCTTGCCCGTGCCCGGCGGGCCCGACAGGATCAGGTT 15123 Query 333232 GGGCATGTTG-CCGTCGGCGGCCAGCGCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCGA 333290 | ||||||| ||| | || |||| |||| || || || | || |||||| | Sbjct 15122 CGTCATGTTGCCCGCCTGC-GCCATGGCCTGCAGACTCGCCACCGTGTCGCGGTTGCCCA 15064 Query 333291 CAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGATCCATGG 333333 | | |||| | ||||| || |||||||| || | ||| || Sbjct 15063 CCACGTCGGCCAGCACGCGCGGCCGGTACTTCTCCACCCACGG 15021 >seq498 Length=26695 Score = 230 bits (254), Expect = 3e-54 Identities = 235/305 (77%), Gaps = 4/305 (1%) Strand=Plus/Plus Query 259883 ACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCC 259942 || |||||| |||||||||| |||| ||||| |||||||| ||||| ||||| ||| Sbjct 3853 ACGTACGAGCTCATGTCGCAGAAGTTCTTCACGCACGCGACGCCGACGCTGTTTAACGCC 3912 Query 259943 GGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATC 260002 || |||||||| |||||| || || ||||| || |||| |||| ||| ||| || ||| Sbjct 3913 GGAACGCCGCGTCCGCAGCTGTCCTCCTGCTTCCTATTGGCCATGCAGGACGACTCCATC 3972 Query 260003 GAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATC 260062 ||||| |||||||||||||||||||||||||| |||||||||| ||| || || ||| Sbjct 3973 GAGGGTATCTATGACACGCTCAAGCAGTGCGCCTGCATCTCCAAGTGGGCGGGGGGTATC 4032 Query 260063 GGTTTTGCCGCA--CACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCC 260120 || | | ||| ||||| | |||||| | | |||| | |||||||||||| Sbjct 4033 GGCAT--CAGCATGCACAACATTCGCGCCACCAACAGCTACATTCGAGGCACCAACGGCT 4090 Query 260121 AGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACC 260180 ||||||||| | | |||||||| ||||| || ||||||||||| || ||||| |||| Sbjct 4091 CCTCCAACGGCATCATCCCCATGCTGCGCGTGTTCAACGACACGGCCCGGTACGTGGACC 4150 Query 260181 AGTGC 260185 || || Sbjct 4151 AGGGC 4155 Score = 154 bits (170), Expect = 2e-31 Identities = 339/511 (66%), Gaps = 16/511 (3%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 ||||||||||||||||||||| ||| ||| |||||| || || |||||||||||| | Sbjct 4153 GGCGGCGGCAAGCGCAAGGGCAGCTTCGCCATCTACCTCGAGCCCTGGCACGCCGACGTG 4212 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || | | |||||||| ||||||||||||| | | | | ||| | || ||| Sbjct 4213 TTCGAGTTCCTGGACCTGCGCAAGAACCACGGCA----ACGAGCTGCACC--GTGCCCGC 4266 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 || || || |||| |||||| | ||||||||| ||| ||| ||| | || | || Sbjct 4267 GACCTGTTCTACGCGCTGTGGGTGCCCGACCTGTTCATGAAGCGCGTGGAGGCCAACGGC 4326 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 | ||| | || ||||| |||||| ||||| || |||| |||| || | | Sbjct 4327 AAGTGGAGTTTGTTCTGCCCCAACGAGGCCCCCGGGCTCTACGAGTGCTGGGGGGACGAG 4386 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCC 262084 ||||| |||||| || | || |||| || | Sbjct 4387 TTTGAGAGCCTCTACGACAAGTACGAGCGCGAGGGCCGCGCCCGCAAGACCATC---AAC 4443 Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144 || | ||| | |||| ||||| | | || || |||||||| ||| ||||| |||| Sbjct 4444 GCGCAGCAGCTGTGGTTCGCCATCCTGGACGCGCAGATCGAGACGGGCGTGCCCTTCATG 4503 Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAG 262202 ||||||||||||| | ||||| | ||||||||||||||| ||||||| || Sbjct 4504 CTCTACAAGGACGCGGCCAACCGCAAGTCCAACCAGCAGAACCTCGGCACCATCCGCTCC 4563 Query 262203 AGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCA 262262 || |||||||||| |||| | | ||| |||| ||| ||||| ||||||| Sbjct 4564 AG--CAACCTGTGCTGCGAGGTGATGGAGTACACGTCCCCCGACGAGGTGGCCGTGTGCA 4621 Query 262263 ACCTCTCGAGCGTGGCCCTGCCCAAGTTTGT 262293 |||| | |||||| ||||||||||| || Sbjct 4622 ACCTGGCCTCCGTGGCGCTGCCCAAGTTCGT 4652 Score = 145 bits (160), Expect = 1e-28 Identities = 337/502 (67%), Gaps = 22/502 (4%) Strand=Plus/Plus Query 262915 CATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATC 262974 || || || ||||||||| |||| ||||| | |||||||||||| | ||| | |||||| Sbjct 5059 CACGGTCTTCGCAACTCGCTGCTGGTGGCCCCCATGCCCACGGCTTCCACGGCCCAGATC 5118 Query 262975 CTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTC 263034 || ||||||| |||| | ||||| | |||| |||||| |||| ||||| ||||| Sbjct 5119 CTAGGCAACAACGAGTCCATCGAGCCCTACACGTCCAACATGTACAACCGCCGTGTGCTG 5178 Query 263035 TCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTG 263094 | || || || || | || ||| ||||| | ||| | | | || ||| | Sbjct 5179 GCCGGTGAGTTCACGATCGTGAACAAGTACCTGATGAAGGAGCTCATTGAGCTGGGCATC 5238 Query 263095 TGGACGCCCGACTTTCGCGACCGGCTCATTGCGGCACAG-GGCTCGGTGCAGGGCTTTGA 263153 ||||| |||||| | ||| | | | || || || | ||||| |||||| Sbjct 5239 TGGACACCCGACGTGCGCAATCAGATC-CTGAACGACGGCGGCTCCGTGCAG-------- 5289 Query 263154 CGACGAGGAGGTGCCGCCCGATC---TCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCC 263210 | | | ||| ||||||| |||||| | |||||| ||||||||| | Sbjct 5290 -AAGGTGAAGGCCATCCCCGATCACGTCAAGGAGAAGTACAAGACGGTGTGGGAGAT--- 5345 Query 263211 CAACCGGGTGAC---CATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCA 263267 ||| | | | | | || || |||||||||||| |||| | |||||| || Sbjct 5346 CAAGCAGAAGGCAGTACTGGACTTGTCGGCCGACCGCGGTGCCTACATTTGCCAGAGTCA 5405 Query 263268 GTCGCTCAACCTGTACCTCGCCGACCCGA-CGGCCGAGAGCATCACGTCGATGCACGCCT 263326 |||||||||| | || |||||||||||| | | | ||| |||||||||||||| || Sbjct 5406 GTCGCTCAACATCCACATCGCCGACCCGACCATCAGCAAGC-TCACGTCGATGCACTTCT 5464 Query 263327 ATGCGTGGCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCA 263386 | || ||| || |||||||| ||||||||||| ||||| || || ||| Sbjct 5465 ACGCCTGGAAGAAGGGGCTCAAGACCGGCATGTACTACATGCGCGGACGCCCGAAAGCCG 5524 Query 263387 ACGCCATTCAATTCACCGTCGA 263408 ||||||| | ||||| || || Sbjct 5525 ACGCCATCAAGTTCACTGTGGA 5546 Score = 98.7 bits (108), Expect = 1e-14 Identities = 147/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 262407 AGGCGATGGCGCGCAACCTCAATCGTGTGATTGACATTAATCACTACCCGGTGCCCGAGG 262466 ||| | || | ||||||||||| || || ||| |||| |||| || ||| |||||| Sbjct 4697 AGGTGGTGACCCGCAACCTCAACAAGGTCATCGACGTTAACTACTATCCCGTGGCCGAGG 4756 Query 262467 CCCGCCACTCGAATCTGCGCCATCGACCGATGGGCGTCGGCGTGCAGGGCCTCGCCGACG 262526 | ||| | || || ||||||| || || || ||| ||||||| ||||||||||| |||| Sbjct 4757 CGCGCAAGTCCAACATGCGCCACCGCCCCATCGGCATCGGCGTCCAGGGCCTCGCGGACG 4816 Query 262527 TGTTTGCCCTGATGGACCTGCCGTGGGAGAGC--GCCGGCGCACGACGTCTCAACCGCGC 262584 || ||| ||| || ||| |||||| || ||| | ||| |||||| Sbjct 4817 CCTTCATCCTCATGAACTACGCGTTCGAGAGCGAGCAGGCCCGCGA--GCTCAACAAGAA 4874 Query 262585 CATCTTTGAGACGGTCTACCATGCGGC 262611 |||||| |||||| ||||| | || || Sbjct 4875 CATCTTCGAGACGATCTACTACGCCGC 4901 >seq748 Length=18724 Score = 163 bits (180), Expect = 4e-34 Identities = 347/513 (68%), Gaps = 9/513 (2%) Strand=Plus/Plus Query 2133368 GACGCCTGCCAAGATGGCGCGCATGGCCGACGCCACGAGGACCATGCTGGTCTGCCTGGG 2133427 |||||| |||||| || || ||||| | ||| || ||| |||| | ||| | || Sbjct 5384 GACGCC-GCCAAGCTGCAGCAGATGGCGGCGGCCGTGACGACGCTGCTCGAGTGCATCGG 5442 Query 2133428 CGAGGATGTGACGCGCGAGGGCCTCCTGGACACACCCATGCGCGTGGCCAAGGCCATGGT 2133487 |||||| | ||||||||| || ||| | || ||||||||| |||||||||| || | Sbjct 5443 CGAGGACCCGCAGCGCGAGGGGCTGCTGAAGACGCCCATGCGCATGGCCAAGGCGCTGCT 5502 Query 2133488 GGAGCGCACGCGCGGCCATCGCATGACCCTGGCCGACGCCGTCGGCGGCGCCCTCTTTGA 2133547 | | ||| ||| | || || ||||||||||| | || ||| | || || Sbjct 5503 GTACAACACCAAGGGCTACGGCCAGAGCCTGGCCGACGTGCTGAACGAGGCCGTGTTCGA 5562 Query 2133548 CGAGGCGTCGGACGAGATGGTGACGGTGCGCGATATTGACTTTTTCTCCATGTGCGAGCA 2133607 |||| ||||||||||| | |||||||| || ||| | | ||||||||||||||| Sbjct 5563 GGAGGACCACGACGAGATGGTCATCGTGCGCGACATCGACCTGTACTCCATGTGCGAGCA 5622 Query 2133608 CCACCTGCTGCCCTTTATCGGCAAGGCCCACGTGGGCTACCTGCCCGCGGGCAAGATCAT 2133667 |||| || |||| || | ||||||| ||| | |||||| | ||| |||||| | | Sbjct 5623 CCACATGGTGCCGTTCACGGGCAAGGTGCACATCGGCTACATCCCCAACGGCAAGGTGCT 5682 Query 2133668 CGGTCTGAGCAAGATCCCGCGCATCGTCGACATGTTTTCCGACCGCTTCCAAGTACAGGA 2133727 || || |||||| | | | || ||| | || || |||| | || || ||||| Sbjct 5683 GGGGCTCAGCAAGCTGGCCAGAGTCAGCGAGGTCTTCTCGCGCCGCCTGCAGGTGCAGGA 5742 Query 2133728 GGCACTCACGCGCCAGATCGCCGAG---AGCGTGAGCCAGGTTA-CGGGCGCGCGCGGCG 2133783 | ||||| ||||||||| | | | || || || | || || | | |||| Sbjct 5743 GCGGCTCACCAAGCAGATCGCCAACGCCATCATGGGC---GTCATCGAGCCCAAG-GGCG 5798 Query 2133784 TCGGCGTCGTCCTCGAGGGCCTGCACATGTGCGTGTGTATGCGCGGCGTGCGCAAAACGG 2133843 | | ||| ||| |||||| | |||||||||| || ||||||||||| || | | Sbjct 5799 TGGCCGTGGTCATCGAGGCCACGCACATGTGCATGGTCATGCGCGGCGTCGAGAAGAGCG 5858 Query 2133844 GCTCGAACACGGTCACGCGCGTCCTCCTGGGCG 2133876 || | | ||| ||||| || | | ||||||| Sbjct 5859 GCGCCAGCACCGTCACCAGCAGCGTGCTGGGCG 5891 >seq461 Length=28201 Score = 159 bits (176), Expect = 5e-33 Identities = 183/245 (75%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 724896 TCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCA 724955 ||||||||| ||| |||||||||||||| |||||||||||| || || || Sbjct 1351 TCGTACTCGACCTACATCTACAAGGTGCTGCGTCAGGTGCACCCCGAGAC-----GGGCA 1297 Query 724956 TCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC 725015 || | | | | | |||||||||||||||||||| |||||||||| |||| |||||| Sbjct 1296 TCAGCAAGCGCGGC-ATGTCGATCATGAACTCGTTCATCAACGACATCTTCGAGCGCATC 1238 Query 725016 GGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAG 725075 | | | |||||||| ||| |||||| ||||||| ||| | || |||||| Sbjct 1237 GCCTCGGAGGCCGGCAAGCTGTCGCGCTACAACAAGAAGTCGACGCTGTCCAGCCGCGAG 1178 Query 725076 ATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAG 725135 |||||||| ||||||||||| || | | ||||| ||||||| ||||||||| || || Sbjct 1177 ATCCAGACGGCCGTGCGCCTCATGCTCCCTGGCGAGCTGGCCAAGCACGCCGTGTCGGAA 1118 Query 725136 GGCAC 725140 ||||| Sbjct 1117 GGCAC 1113 >seq21 Length=99547 Score = 159 bits (176), Expect = 5e-33 Identities = 200/272 (74%), Gaps = 12/272 (4%) Strand=Plus/Minus Query 724872 GGCCAGCGCAAGAAGAATTATGCCTCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAG 724931 ||| || |||||||| | | ||||||||| ||| |||||||||||||| ||| Sbjct 36182 GGCAAGGGCAAGAAGCGTGTCGAGTCGTACTCGACCTACATCTACAAGGTGCTGCGCCAG 36123 Query 724932 GTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC---ATGTCGATCATGAACTCG 724988 ||||||||| || ||| |||| | |||| | |||||||||||||||||| Sbjct 36122 GTGCACCCCGAGAC---TGG--CATC----AGCAAGCGCGGTATGTCGATCATGAACTCG 36072 Query 724989 TTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAAC 725048 || |||||||||| |||| ||||||| | | |||||||| ||| |||||| |||| Sbjct 36071 TTCATCAACGACATCTTCGAGCGCATCGCCTCGGAGGCCGGCAAGCTGTCGCGCTACAAC 36012 Query 725049 AAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGC 725108 ||| ||| | || |||||||||||||| ||||||||||| || | | || Sbjct 36011 AAGAAGTCGACGCTGTCCAGCCGCGAGATCCAGACGGCCGTGCGCCTCATGCTCCCGGGT 35952 Query 725109 GAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || ||||||| ||||||||| || |||||||| Sbjct 35951 GAGCTGGCCAAGCACGCCGTGTCTGAGGGCAC 35920 >seq904 Length=15537 Score = 113 bits (124), Expect = 6e-19 Identities = 230/337 (68%), Gaps = 5/337 (1%) Strand=Plus/Plus Query 165555 GTCATGCGCGCCTATGTCGAAAAGCCGCGCACGACCGTTGGATGGAAGGGCCTGGCCAGT 165614 |||||||||| ||| |||| ||||| ||||| ||||| || |||||||||||| || Sbjct 7701 GTCATGCGCGTCTACTTCGAGAAGCCCCGCACCACCGTGGGCTGGAAGGGCCTGATCAAC 7760 Query 165615 GACCCCGATCTTGATGGCTCGTGCCGCCTGGCTGATGGCCTTGATACATCGCGCCGCCTG 165674 ||||| || || || ||||| | | | | | ||||| | | |||| || | Sbjct 7761 GACCCGGACCTGGACGGCTCCTTCAACATCAACAAGGGCCTGCG--CGTGGCGC-GCGAG 7817 Query 165675 CTGCGTGATCTCGTCGTCGACGTCGACCAACCCGTGGCCGTCGAGTTTCTCAGTCCTCTG 165734 |||| | | || ||| | | || |||| | | |||||| || | | | Sbjct 7818 CTGCTGGCCGCCATCAACGAGCTGGGCCTGCCCGCCGGCTGCGAGTTCCTG-GACACCAT 7876 Query 165735 GTGGCCCCCTATT-TGGCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGA 165793 || ||| | | | | ||||| || | ||||||||| |||| |||||||||||||| Sbjct 7877 GTCGCCGCAGTTCATCTCGGACCTCGTGAGCTGGGGCGCCATCGGCGCGCGCACCACCGA 7936 Query 165794 GAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAG 165853 | ||||| ||||||||||| || || | |||| | ||||||| |||||||| ||| | Sbjct 7937 GTGCCAGCTGCACCGCGAGCTGTGCTCCGGGCTGTCCATGCCCATCGGCTTCAAGAACGG 7996 Query 165854 CACCGACGGCAGCGTGGCGACGGCCCTCGATGCCGTG 165890 ||| | |||| | || | |||| | || |||||| Sbjct 7997 CACGGGCGGCGACCTGCAGCTGGCCGTGGACGCCGTG 8033 >seq403 Length=30921 Score = 113 bits (124), Expect = 6e-19 Identities = 197/281 (70%), Gaps = 12/281 (4%) Strand=Plus/Plus Query 1152833 CCGTCGTAGGGCTGCTTGCGCGCGATGATCTCCCACATGACGACGCCAAACGAGTAGACA 1152892 || ||||| || || || || || ||||||||| ||||| | || |||||| | || Sbjct 5086 CCATCGTACGGGCACTCGCCCGTGACGATCTCCCAAATGACAATTCCGAACGAGAACACG 5145 Query 1152893 TCGGCCTTTTCCGAATACTTTTCGCCGCGCAAGATCTCGGGCGCCGTCCACGCCGGCGTG 1152952 |||||||| |||| ||||| | | || ||||| |||||||||| ||||| | ||| Sbjct 5146 TCGGCCTTCTCCGTGTACTTCTGGTTGCCCAAGACCTCGGGCGCCATCCACTGCACCGTC 5205 Query 1152953 CCGCAG---CGGGTCATCGTC-GCA--TTGTCCTGGCGGATGCGGGCAAAGCCAAAGTCG 1153006 |||||| | ||||| ||| ||| | | ||| | || || | || || || Sbjct 5206 CCGCAGTTCCCCGTCATGGTCTGCACGTGGGCCTTC---ACCCGTGCCAGTCCGAAATCC 5262 Query 1153007 GCCACCTTGACGGTGAAATTGTCGTCGACGAGCAGGTTGGACGACTTTTGGAGGTCGCGG 1153066 | || ||||| | |||| || | ||| ||||||||||||| | || || ||||| ||| Sbjct 5263 GACAACTTGATGTTGAAGTTCTTGTCCACGAGCAGGTTGG--GGCTCTT-CAGGTCTCGG 5319 Query 1153067 TGCACGATCGGCCGTTCGCGCCCGTGCAGATAGGCCACGCC 1153107 |||| ||| ||||| ||| |||||| || | || ||| Sbjct 5320 TGCAGGATGGGCCGCTCGAAGTGGTGCAGGTACGACATGCC 5360 >seq1134 Length=11777 Score = 98.7 bits (108), Expect = 1e-14 Identities = 112/147 (76%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 1571188 GGCAGGTGCCCCTGCTGCTGGCGTGGGCCATGACCATCCACAAGTGCCAGGGCATGTCGC 1571247 ||||| |||| ||| ||||||| |||||||| | |||||||||| ||||||| |||| Sbjct 5702 GGCAGCTGCCGCTGGTGCTGGCCTGGGCCATCAGCATCCACAAGAGCCAGGGGCTGTCCT 5761 Query 1571248 TGGACCGGGCCGTCATCTCGATGAG-CG-GCATCTTTGACTGTGGCCAGGCCTACGTGGC 1571305 | ||| ||||| || || | || || |||| || | |||||||| |||||||| Sbjct 5762 TCGACGCCGCCGTG--CTGGACCTGTCGCGCGTCTTCGAGTTCGGCCAGGCGTACGTGGC 5819 Query 1571306 GCTGTCGCGCATCCGCTCGCTCGACGG 1571332 |||||| ||| | |||||||| || || Sbjct 5820 GCTGTCACGCGTACGCTCGCTGGAAGG 5846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177206446975740