Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cinnamomi_20[genbank_20GCA_5F001314505.1_202015-10- 14] 6,270 sequences; 53,969,337 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq498 610 7e-170 seq374 224 1e-53 seq5612 221 1e-52 seq304 87.8 2e-12 >seq498 Length=26695 Score = 610 bits (676), Expect = 7e-170 Identities = 1194/1738 (69%), Gaps = 76/1738 (4%) Strand=Plus/Plus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCG----AGACATA 19173 ||||| || ||| | |||||||| | |||| ||| || ||||| |||| || Sbjct 3802 ATGCGCGTGGCGCTGGGCATCCACAAGGCCGACATCC----AGGCCGCGCTGGAGACGTA 3857 Query 19174 CGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTAC 19233 ||| || ||| ||||||||||||||||||||||||||||| || || |||||||| || Sbjct 3858 CGAGCTCATGTCGCAGAAGTTCTTCACGCACGCGACGCCGACGCTGTTTAACGCCGGAAC 3917 Query 19234 GAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGG 19293 | |||||| |||| ||| |||||| |||| ||| |||| ||| ||| ||||| Sbjct 3918 GCCGCGTCCGCAGCTGTCCTCCTGCTTCCTATTGGCCATGCAGGACGACTCCATCGAGGG 3977 Query 19294 CATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGAT 19353 ||||| || ||||||||| ||||||| ||||||||||||| | ||||||||||| || Sbjct 3978 TATCTATGACACGCTCAAGCAGTGCGCCTGCATCTCCAAGTGGGCGGGGGGTATCGGCAT 4037 Query 19354 CCAC-TGCTCGAATATCCGGTCGAGT----GGTACACGAATCAATGGGACGAACGGAGTA 19408 | | ||| | || || || | | | |||| || | || || ||||| Sbjct 4038 CAGCATGCAC-AACATTCGCGCCACCAACAGCTACAT---TCGA-GGCACCAACGGCTCC 4092 Query 19409 GCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAG 19468 || |||| ||| |||| ||||| ||||| |||||| |||||||| ||||||| ||||| Sbjct 4093 TCCAACGGCATCATCCCCATGCTGCGCGTGTTCAACGACACGGCCCGGTACGTGGACCAG 4152 Query 19469 GGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTC 19528 || |||||||| ||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct 4153 GGCGGCGGCAAGCGCAAGGGCAGCTTCGCCATCTACCTCGAGCCCTGGCACGCCGACGTG 4212 Query 19529 ATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGT---CGCGAC 19585 | || ||||| || |||||| |||||| || ||||| ||| | || |||||| Sbjct 4213 TTCGAGTTCCTGGACCTGCGCAAGAACCACGGCAACGAGC---TGCACCGTGCCCGCGAC 4269 Query 19586 CTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAA 19645 || ||| || ||||| | || ||||| |||||| || || ||| ||| | Sbjct 4270 CTGTTCTACGCGCTGTGGGTGCCCGACCTGTTCATGAAGCGCGTGGAGGCCAACGGCAAG 4329 Query 19646 TGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTC 19705 ||| || | ||||| |||| ||| || || ||| || || || | ||| Sbjct 4330 TGGAGTTTGTTCTGCCCCAACGAGGCCCCCGGGCTCTACGAGTGCTGGGGGGACGAGTTT 4389 Query 19706 AATGAGT-TGTACCGGACTTACGTAGCCC-AGGGCCGGTTCAAGAAGGTGGTCCGGGCCC 19763 | ||| | ||| | |||| ||| | ||||||| | ||| || || | Sbjct 4390 GA-GAGCCTCTACGACAAGTACG-AGCGCGAGGGCCGCGCCCGCAAGACCATCAACGCGC 4447 Query 19764 GGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCT 19823 | | | ||| | | |||| | ||| ||||||| ||| || | |||| || Sbjct 4448 AGCAGCTGTGGTTCGCCATCCTGGACGCGCAGATCGAGACGGGCGTGCCCTTCATGCTCT 4507 Query 19824 ACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCA 19883 |||||||||| || ||| |||||| || ||| ||||| ||||| | ||| || || Sbjct 4508 ACAAGGACGCGGCCAACCGCAAGTCCAACCAGCAGAACCTCGGCACCATCCGCTCCAGCA 4567 Query 19884 ACCTGTGTACTGAAATCATGGAGGTTTCCAAG---CCGGACGAGACTGCCGTGTGTAATC 19940 ||||||| || | |||||| | || | || |||||| |||||||| || | Sbjct 4568 ACCTGTGCTGCGAGGTGATGGAG---TACACGTCCCCCGACGAGGTGGCCGTGTGCAACC 4624 Query 19941 TGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGT 20000 |||| ||| || ||||| | ||||| | | | | ||||||| ||| | | Sbjct 4625 TGGCCTCCGTGGCGCTGCCCAAGTTCGTGGACGACGGCGTGTTCGACTACCAGAAACTCT 4684 Query 20001 ACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACC 20060 ||||||| ||| ||| || || || || || || |||||||| |||| || | Sbjct 4685 ACGAGGTCACCAAGGTGGTGACCCGCAACCTCAACAAGGTCATCGACGTTAACTACTATC 4744 Query 20061 CGACCGAGGC---GGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCC 20117 | || ||| |||||||||||| || ||||||||||| || |||| |||||||||| Sbjct 4745 C---CGTGGCCGAGGCGCGCAAGTCCAACATGCGCCACCGCCCCATCGGCATCGGCGTCC 4801 Query 20118 AGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGA---CGATCCCAAGGCGC 20174 ||||||| || |||| ||||| | | | | | ||||| ||| | |||| | Sbjct 4802 AGGGCCTCGCGGACGCCTTCATCCTCATGAACTACGCGTTCGAGAGCGAGC---AGGCCC 4858 Query 20175 GCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGC- 20233 |||||||||||||| |||||||||| | | ||| |||| ||| || || ||| | Sbjct 4859 GCGAGCTCAACAAGAACATCTTCGAGACGATCTACTACGCCGCCGTC---GAGACGTCCA 4915 Query 20234 --GAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGG 20291 || | ||||| ||| |||||| |||||||||||| |||| ||||| || | ||| Sbjct 4916 TGGAGATTGCCAAGGAGCTCGGCCCCTACGAGACGTTCCAGGGCTCGCCGGCCAGCAAGG 4975 Query 20292 GTATCCTCCAGCCGGACATGTGGGGCGTCA--CTGAGAATGAGT-TTTGGAGC------G 20342 | ||| ||||| |||||||||||||||| | | | || | |||| | | Sbjct 4976 GGATCTTCCAGTTCGACATGTGGGGCGTCACCCCGTCCTCGGGTCTCTGGAACTGGGCGG 5035 Query 20343 CCCTCAAGGTTGAGATCAAG---ACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCA 20399 | |||||| |||| | | | ||||| |||||||||||| |||| || || |||| Sbjct 5036 CGCTCAAG---GAGAACGTGGTCAAACACGGTCTTCGCAACTCGCTGCTGGTGGCCCCCA 5092 Query 20400 TGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGA 20459 |||| || || || || ||||||||| | || ||||||||| | ||||||| |||||| Sbjct 5093 TGCCCACGGCTTCCACGGCCCAGATCCTAGGCAACAACGAGTCCATCGAGCCCTACACGT 5152 Query 20460 CCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGG 20519 ||||||| ||| || ||| ||||||||||||||| || || |||||| ||||| Sbjct 5153 CCAACATGTACAACCGCCGTGTGCTGGCCGGTGAGTTCACGATCGTGAACAAGTACCTGA 5212 Query 20520 TCCGCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAAT--TGTCCG 20577 | || | || | | || ||| | ||| | | ||| | || || || Sbjct 5213 TGAAGGAGCTCATTGAGCTGGGCATCTGGACACCCGACGTGCGCAATCAGATCCTGAACG 5272 Query 20578 AGCCGGCGGGAGCGTCC---AGGCATTGGATATCCCCCAGAACCTCAAGGACATTTACAG 20634 | |||||| ||| | ||| || |||||| | || ||||||| | |||| Sbjct 5273 A--CGGCGGCTCCGTGCAGAAGGTGAAGGCCATCCCCGATCACGTCAAGGAGAAGTACAA 5330 Query 20635 GACCGTATGGGAAATCCCACAGAAGAGCA-TCATCGACATGGCGGCCGATCGCGGCGCCT 20693 ||| || ||||| ||| |||||| ||| | | ||| || ||||||| ||||| |||| Sbjct 5331 GACGGTGTGGGAGATCAAGCAGAAG-GCAGTACTGGACTTGTCGGCCGACCGCGGTGCCT 5389 Query 20694 ACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGA 20753 |||| |||| ||||||||||| || ||| | | |||| | | ||||| | Sbjct 5390 ACATTTGCCAGAGTCAGTCGCTCAACATCCACATCGCCGACCCGACCATCAGCAAGCTCA 5449 Query 20754 GCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCG 20811 || ||||| | |||| |||| | |||||||||||||| ||||||||||| |||| Sbjct 5450 CGTCGATGCACTTCTACGCCTGGAAGAAGGGGCTCAAGACCGGCATGTACTACATGCG 5507 Score = 572 bits (634), Expect = 2e-158 Identities = 1179/1726 (68%), Gaps = 52/1726 (3%) Strand=Plus/Minus Query 78193 CGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGAC 78252 |||| ||||||||||| |||||||| ||||||||||| |||| | |||||| || Sbjct 5507 CGCATGTAGTACATGCCGGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATCGACGTG 5448 Query 78253 AGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTAC 78312 |||||| | |||||| | ||| ||||||||||||||| |||| ||||| Sbjct 5447 AGCTTGCTGATGGTCGGGTCGGCGATGTGGATGTTGAGCGACTGACTCTGGCAAATGTAG 5388 Query 78313 GCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGG 78372 |||||||||||||||| || ||| | || | ||| ||| |||||||| | ||| | Sbjct 5387 GCACCGCGGTCGGCCGACAAGTCCAGTACTGCCTTCTGCTTGATCTCCCACACCGTCTTG 5328 Query 78373 TAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTT---GTACGCTCCCACCGGCTCGC 78429 || | |||| | | || ||||| || | | | | ||| || ||| | | Sbjct 5327 TACTTCTCCTTGACGTGATCGGGGATGGCCTTCACCTTCTGCACGGAGCCGCCGTCGTTC 5268 Query 78430 ACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAA---GATCCCGGACC 78486 | || | ||| | | || ||||| || | || || | ||| | | Sbjct 5267 AGGATCTGATTGCGCACGTCGGGTGTCCAGA---TGCCCAGCTCAATGAGCTCCTTCATC 5211 Query 78487 AGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTC 78546 |||| | ||| | || |||||| |||||||| ||||| ||| ||||||| | Sbjct 5210 AGGTACTTGTTCACGATCGTGAACTCACCGGCCAGCACACGGCGGTTGTACATGTTGGAC 5151 Query 78547 GTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATG 78606 ||||| ||||||| | ||||||||| || | ||||||||| || || || || |||||| Sbjct 5150 GTGTAGGGCTCGATGGACTCGTTGTTGCCTAGGATCTGGGCCGTGGAAGCCGTGGGCATG 5091 Query 78607 GGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGA---CCTTTAG---- 78659 || || ||||| || || || |||||||| || |||| | || |||| || Sbjct 5090 GGGGCCACCAGCAGCGAGTTGCGAAGACCGTGT---TTGACCACGTTCTCCTTGAGCGCC 5034 Query 78660 GCC--GTCCCAAAATTCATTCGCCGCGATC---CCCCACATGTCCGGTTGAAGGATACCC 78714 ||| || ||| | | | || | | ||||||||||| || | ||| ||| Sbjct 5033 GCCCAGTTCCAGAGACCCGAGGACGGGGTGACGCCCCACATGTCGAACTGGAAGATCCCC 4974 Query 78715 TCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCAT 78774 | | |||||||| |||| |||||||||||| | || ||||||||| | || ||| Sbjct 4973 TTGCTGGCCGGCGAGCCCTGGAACGTCTCGTAGGGGCCGAGCTCCTTGGCAATCTC-CAT 4915 Query 78775 G-AC-TCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCG 78832 | || || | | ||| |||| ||| | | |||||||||| ||||||||||||||| | Sbjct 4914 GGACGTCTCG-ACGGCGGCGTAGTAGATCGTCTCGAAGATGTTCTTGTTGAGCTCGCGGG 4856 Query 78833 CCTTGGTCTCG-TCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACG 78891 ||| | || | ||||||| | | | |||||| | || || |||||||||||| Sbjct 4855 CCT-GCTCGCTCTCGAACGCGTAGTTCATGAGGATGAAGGCGTCCGCGAGGCCCTGGACG 4797 Query 78892 CCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTC---GGGTAA 78948 ||||| |||| || ||||||||||||||| ||| || |||||||| | || || Sbjct 4796 CCGATGCCGATGGGGCGGTGGCGCATGTTGGACTTGCG---CGCCTCGGCCACGGGATAG 4740 Query 78949 AAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAAT 79008 |||| |||||||| ||| ||||| || || || ||| || |||||||| | | Sbjct 4739 TAGTTAACGTCGATGACCTTGTTGAGGTTGCGGGTCACCACCTTGGTGACCTCGTAGAGT 4680 Query 79009 TTGGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTT 79067 || | | || || | | || | | ||| | || || || || |||||||| Sbjct 4679 TTCTGGTAGTCGAACACGCCGTCGTCC-ACGAACTTGGGCAGCGCCACGGAGGCCAGGTT 4621 Query 79068 GCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGA 79127 |||||||||| |||||| ||| | ||| || | || ||||| || || Sbjct 4620 GCACACGGCCACCTCGTCGGGGGACGTGTACTCCATCACCTCGCAGCACAGGTTGCTGGA 4561 Query 79128 CTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACAT 79187 ||||||||||| ||||| ||||||| ||| ||| |||||||||||| ||| Sbjct 4560 GCGGATGGTGCCGAGGTTCTGCTGGTTGGACTTGCGGTTGGCCGCGTCCTTGTAGAGCAT 4501 Query 79188 GTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCG 79247 | | ||| || ||||| | ||| | || | | || ||| | | | | || Sbjct 4500 GAAGGGCACGCCCGTCTCGATCTGCGCGTCCAGGATGGCGAACCACAGCTGCTGCGCGTT 4441 Query 79248 GACAACCTTCTTGTACCGACCCTGTGCGA-CGTACGTCCGGTACAA-CTCGTTGAAAGCC 79305 || ||| | || |||| ||| ||||| | ||| | ||| | || | Sbjct 4440 GATGGTCTTGCGGGCGCGGCCCTC-GCGCTCGTACTTGTCGTAGAGGCTC-TCAAACTCG 4383 Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 ||||| || ||| || || ||| ||||| ||||| | || ||| | || Sbjct 4382 TCCCCCCAGCACTCGTAGAGCCCGGGGGCCTCGTTGGGGCAGAACAAACTCCACTTGCCG 4323 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | ||| || || |||||| ||||| || | |||||| || ||| ||||||||| Sbjct 4322 TTGGCCTCCACGCGCTTCATGAACAGGTCGGGCACCCACAGCGCGTAGAACAGGTCGCGG 4263 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 ||| | ||||| ||| |||||| ||||| || || || || | | ||||||| Sbjct 4262 GCACGGTGCAGCTCGTTGCCGTGGTTCTTGCGCAGGTCCAGGAACTCGAACACGTCGGCG 4203 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||| ||||| || ||||||||||| ||||||||||||||||||||||||| ||| Sbjct 4202 TGCCAGGGCTCGAGGTAGATGGCGAAGCTGCCCTTGCGCTTGCCGCCGCCCTGGTCCACG 4143 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTC 79605 ||||||||||||| |||||| || || |||||||| | |||||||| || | |||||| Sbjct 4142 TACCGGGCCGTGTCGTTGAACACGCGCAGCATGGGGATGATGCCGTTGGAGGAGCCGTTG 4083 Query 79606 GTCCCGTTGATTCGTGTACC----GCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGC 79660 || || | || | ||| | | | || |||||||| | ||| | ||| ||||| | Sbjct 4082 GTGCC-TCGAAT---GTAGCTGTTGGTGGCGCGAATGTT-GTGCATGCTGATGCCGATAC 4028 Query 79661 CCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCG 79720 |||| | ||||||||||||| ||||||| ||||||||| || ||||| |||||||| | Sbjct 4027 CCCCCGCCCACTTGGAGATGCAGGCGCACTGCTTGAGCGTGTCATAGATACCCTCGATGG 3968 Query 79721 AGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGT 79780 ||||||||| ||| || | ||||||||| |||| ||| || ||| ||||||| Sbjct 3967 AGTCGTCCTGCATGGCCAATAGGAAGCAGGAGGACAGCTGCGGACGCGGCGTTCCGGCGT 3908 Query 79781 TGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCT 79840 | || || |||||||||||||||||||||||||| || ||| || |||||||||||| Sbjct 3907 TAAACAGCGTCGGCGTCGCGTGCGTGAAGAACTTCTGCGACATGAGCTCGTACGTCTCCA 3848 Query 79841 TGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886 || | ||| |||| | ||||||||| | ||| |||||||| Sbjct 3847 GCGCGGCCTGGATGTCGGCCTTGTGGATGCCCAGCGCCACGCGCAT 3802 >seq374 Length=32324 Score = 224 bits (248), Expect = 1e-53 Identities = 555/828 (67%), Gaps = 27/828 (3%) Strand=Plus/Minus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGCTC 59672 || |||||| | | ||||||| | ||||| | ||||| ||||| |||| || || Sbjct 2130 TCGTTCTGGACGGCCGAGGAGCTGGACCTGGTGCACGACCTCAAGGACTGGGCGAACCTG 2071 Query 59673 AATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGA 59732 | || |||||| | ||||||||| || ||||| |||||||| ||||| || || Sbjct 2070 ACGGACAACGAGCGGTTCTTCATCAAGCACGTGCTGGCGTTCTTCGCTGCGAGCGACGGT 2011 Query 59733 ATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCCCGG 59792 ||||||| || || | | ||||||||| ||| || || ||| | | ||||| || Sbjct 2010 ATTGTGAACGAGAACCTGGCCATGAACTTCAGCAATGAAGTGCAGGTGCCGGAGGCTCGC 1951 Query 59793 TCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCAT 59851 | ||||||| | ||| ||| || |||| |||||||| ||| ||||||||| | Sbjct 1950 TGCTTCTACGGCTTCCAGATCGC-CATCGAGAACATCCACTCGGAGGTGTACTCGCTGCT 1892 Query 59852 GATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAGAC 59911 |||||| | || ||||||| | | ||||||| ||| | || || || ||||| Sbjct 1891 GATCGACACGTACATCAAGGACGCCGTGGAGAAGGACCACCTGCTGCGCGCGATCGAGAC 1832 Query 59912 G-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTG---GAG 59967 | |||| || || || | ||||| | ||||| | ||||| || | || | | | Sbjct 1831 GATCCCGTGC-GTGAAGAAGAAAGCGCACTGGGCGCTCAAGTGG-TGCGACCCGCGTGTG 1774 Query 59968 -CATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGC 60026 | || | | | ||||| | || || || |||||| || || |||||||| ||| Sbjct 1773 TCGTCGTACCCGGAGCGTCTGCTGGCGTTCGCCGCCGTGGAGGGCATTTTCTTCTCGGGC 1714 Query 60027 TCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCC 60086 || ||||| | || ||||||||||| ||||| ||||||||||| |||||||| ||||| Sbjct 1713 TCCTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGCCTGAGCTTCTCG 1654 Query 60087 AACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGC-TCTATTC 60145 ||||||||||| ||| |||||||| | || ||| || || ||| | | | || || Sbjct 1653 AACGAGCTGATCAGCCGTGACGAGGGTATGCACACGGACTTCGC-GTGCCTCATGTACTC 1595 Query 60146 ACACCTATTGGAAAAATGCCCTTCCAAGGATA------TTCACAAGATTGT--TCAGTGG 60197 | || || | || || || ||| | | ||| ||||||| | | Sbjct 1594 CAAGCTGGTGAACAA----GCTGCC--GGAGAGCCGCGTGCACGAGATTGTGCGCGACGC 1541 Query 60198 GCTTGTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATG 60257 | | |||| | ||| ||||||| | || |||| || | || || || ||| Sbjct 1540 GGTGGTGA--TCGAGCACGAGTTCGTGCGCGACTCGCTCCCTGTGGAGCTGATCGGCATG 1483 Query 60258 GACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTT 60317 || | | ||| |||||||| |||| || || ||||| || || | | | Sbjct 1482 AACTCGGCGCTCATGTGCCAGTACATCGAGTTCGTGGCCGACCGTCTGTTGTACTCGCTG 1423 Query 60318 GGAGAAGGACCAATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTG 60377 || | | || ||| |||||| ||||| |||||||||||||| | ||||| | Sbjct 1422 GGTGTGCCAAAGATCTACAACGTGAAGAACCCGTTCGACTGGATGGACATGATCTCTCTC 1363 Query 60378 GAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTATTCAAAG 60425 | || |||||||||||||| |||||||| || || || || || ||| Sbjct 1362 CAGGGCAAGACCAACTTCTTCGAGAAGCGCGTGGGCGAGTACTCCAAG 1315 >seq5612 Length=1235 Score = 221 bits (244), Expect = 1e-52 Identities = 557/826 (67%), Gaps = 23/826 (3%) Strand=Plus/Minus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGCTC 59672 || |||||| | | ||||||| | |||| | ||||| ||||| |||| ||| | Sbjct 1098 TCGTTCTGGACGGCCGAGGAGCTGGACCAGGTGCACGACCTCAAGGACTGGGCCAACCAG 1039 Query 59673 AATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGA 59732 | || |||||| | ||||||||| || |||||||||||||| || || || || Sbjct 1038 ACGGACAACGAGCGGTTCTTCATCAAGCACGTGCTGGCCTTCTTCGCCGCCAGCGACGGC 979 Query 59733 ATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCCCGG 59792 || |||| || || | | ||||||||| ||| || || ||| | |||||| ||| Sbjct 978 ATCGTGAACGAGAACCTGGCCATGAACTTCAGCAACGAAGTGCAGGTGCCCGAGGTCCGC 919 Query 59793 TCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCAT 59851 | ||||||| | ||| ||| || |||| |||||| ||||| ||||||||| | Sbjct 918 TGCTTCTACGGCTTCCAGATCGC-CATCGAGAACATCCACGCCGAGGTGTACTCGCTGCT 860 Query 59852 GATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAGAC 59911 || |||| | ||||||| || |||||| ||| | |||||||| ||||| Sbjct 859 CATTGATACCTACATCAAGGACACGATGGAGAAGAACCACCTGCTGCGTGCCATCGAGAC 800 Query 59912 G-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTG-GAGCA 59969 | |||| || || || | ||||| | ||||| | ||||| || | || | ||| Sbjct 799 GATCCCGTGC-GTCAAGAAGAAAGCGCACTGGGCGCTCAAGTGG-TGCGACCCGCGAGTG 742 Query 59970 TCATT-TGCAC--AACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGC 60026 || | | | | | ||||| | || || || |||||| || ||||| ||||| ||| Sbjct 741 TCGTCGTACCCGGAGCGTCTGCTGGCGTTCGCTGCCGTGGAGGGCATCTTTTTCTCGGGC 682 Query 60027 TCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCC 60086 |||||||| | || ||||||||||| ||||| ||||||||||| || ||||| ||||| Sbjct 681 TCGTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGAGCTTCTCG 622 Query 60087 AACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGC-TCTATTC 60145 |||||||| || ||| ||||| || | || ||| || || ||| | | | || || Sbjct 621 AACGAGCTCATCAGCCGAGACGAAGGTATGCACACGGACTTCGC-GTGCCTCATGTACTC 563 Query 60146 ACACCTATTGGA-AAAATGCCCTTCCAAG-GATATTCACAAGAT--TGTTCAGTGGGCTT 60201 | || | | || ||||| ||| | ||| |||| || | | | | Sbjct 562 GAAGCTCGTCAACAAGCTGCCC--GAAAGCCGCGTGCACGAGATCGTGCGCGACGCGGTG 505 Query 60202 GTGAAGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACG 60261 |||| | ||| ||||||| | || |||| || | ||||| || ||| || Sbjct 504 GTGA--TTGAGCACGAGTTCGTGTGCGATTCGCTGCCTGTGGAGCTCATTGGCATGAACT 447 Query 60262 CTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTGGAG 60321 | | ||| |||||||| |||| || || |||||||| || | | || | Sbjct 446 CGGCGCTCATGTGCCAGTACATCGAGTTCGTGGCCGACCGCCTGCTGTACTCACTGGGCG 387 Query 60322 AAGGACCA--ATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGA 60379 | ||| || ||| ||| || ||||| |||||||||||||| | |||||| || | Sbjct 386 --TGTCCAAGATCTACAACGTCAAGAACCCGTTCGACTGGATGGACATGATCTCGCTGCA 329 Query 60380 AGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTATTCAAAG 60425 || ||||||||||||||||||||||| || || || || || ||| Sbjct 328 GGGCAAGACCAACTTCTTTGAGAAGCGCGTGGGCGAGTACTCCAAG 283 >seq304 Length=37236 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 159479 CGCTTCTGGGGGTCGCTCAGGACCTCATAGGCCTCCTGGACTTTCTTGAACTTCTCGGCG 159538 ||||||| ||||| || ||||| |||||| || || |||||||| ||| | | Sbjct 19030 CGCTTCTCCGGGTCCGAGAGCACCTCGTAGGCCACCGTGATGGTCTTGAACAGCTCCGGG 18971 Query 159539 TCACCGCCCTTGTCGGGGTGGTGCTCGCGGGCAAGTTTGCGGTACGCCTTTTTGATGTCG 159598 || ||||||||||| ||||||| || | | || || |||||||| ||||| ||||| ||| Sbjct 18970 TCGCCGCCCTTGTCCGGGTGGTTCTTGAGCGCCAGCTTGCGGTAGGCCTTCTTGATCTCG 18911 Query 159599 G 159599 | Sbjct 18910 G 18910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548481809368800