Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cinnamomi_20[genbank_20GCA_5F001314505.1_202015-10- 14] 6,270 sequences; 53,969,337 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq498 334 8e-87 seq5612 136 4e-27 seq447 136 4e-27 seq51 118 1e-21 >seq498 Length=26695 Score = 334 bits (370), Expect = 8e-87 Identities = 553/778 (71%), Gaps = 20/778 (3%) Strand=Plus/Plus Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTACGA 53253 |||||||| || |||| |||||| | |||| | || || | | ||||||||||| Sbjct 3802 ATGCGCGTGGCGCTGGGCATCCACAAGGCCGACATCCAGGCCGCGCTG-GAGACGTACGA 3860 Query 53254 CTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAA 53313 | ||| || |||| ||| |||||||| ||||| || ||||| ||||| || ||| Sbjct 3861 GCTCATGTCGCAGAAGTTCTTCACGCACGCGACGCCGACGCTGTTTAACGCCGGAACGCC 3920 Query 53314 TCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCAT 53373 | || ||| |||| ||||||||| |||| ||| |||| ||||| ||||| || || Sbjct 3921 GCGTCCGCAGCTGTCCTCCTGCTTCCTATTGGCCATGCAGGACGACTCCATCGAGGGTAT 3980 Query 53374 CTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCA 53433 ||| || ||||||||| |||| ||| ||||||||||||| |||| |||||||| ||| Sbjct 3981 CTATGACACGCTCAAGCAGTGCGCCTGCATCTCCAAGTGGGCGGGGGGTATCGGCATCAG 4040 Query 53434 C-TGCTCGAACGTCCGTGCGAACGGCA-CACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491 | ||| | ||| | || || | | || | || || ||| || |||||| | || | Sbjct 4041 CATGCAC-AACATTCGCGCCACCAACAGCTACATTCGAGGC-ACCAACGGCTCCTCCAAC 4098 Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551 || ||| | || ||||| ||||| |||||| |||||||||||||||| ||||||| || Sbjct 4099 GGCATCATCCCCATGCTGCGCGTGTTCAACGACACGGCCCGGTACGTGGACCAGGGCGGC 4158 Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611 || ||||||||||| |||||||||||||||||||| |||||||||||| | | ||| Sbjct 4159 GGCAAGCGCAAGGGCAGCTTCGCCATCTACCTCGAGCCCTGGCACGCCGACGTGTTCGAG 4218 Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTG---CCGTGACCTGTT- 53667 || || || ||||| ||| || || | | ||| ||| | | ||| |||||||| Sbjct 4219 TTCCTGGACCTGCGCAAGAACCACGG---CAACGAGCTGCACCGTGCCCGCGACCTGTTC 4275 Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTA 53727 ||| || |||||| | || ||||| |||||| | |||||| ||| ||||| Sbjct 4276 TAC-GCGCTGTGGGTGCCCGACCTGTTCATGAAGCGCGTGGAGGCCAACGGCAAGTGGAG 4334 Query 53728 CCTGATGTGCCCGAACGAGTGCCCCGGCCTCCA-GGGTGTCTACGGTGAGGAGTTTAACG 53786 || | ||||| |||||| |||||| ||| | | ||| || || || |||||| | | Sbjct 4335 TTTGTTCTGCCCCAACGAGGCCCCCGGGCTCTACGAGTG-CTGGGGGGACGAGTTTGA-G 4392 Query 53787 AG-ATGTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGA 53844 || | || | ||||| || | |||||||| | |||| |||| |||| | Sbjct 4393 AGCCTCTACGACAAGTACG-AGCGCGAGGGCCGCGCCCGCAAGACCATCAACGCGCAGCA 4451 Query 53845 GGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAA 53904 | | ||| || ||||| | ||| | |||||||| ||| | |||| |||||| Sbjct 4452 GCTGTGGTTCGCCATCCTGGACGCGCAGATCGAGACGGGCGTGCCCTTCATGCTCTACAA 4511 Query 53905 GGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGCAAC 53962 ||| ||| |||| ||| ||||||| ||||| ||||| |||| || |||||| Sbjct 4512 GGACGCGGCCAACCGCAAGTCCAACCAGCAGAACCTCGGCACCATCCGCTCCAGCAAC 4569 Score = 205 bits (226), Expect = 1e-47 Identities = 553/830 (67%), Gaps = 57/830 (7%) Strand=Plus/Plus Query 55127 GTTGTGACTCGGAACCTGAACCGGGTCATCGACAAGAATTACTACCCGACTGAAGCGGCG 55186 || ||||| || ||||| ||| |||||||||| || ||||| || | | |||| Sbjct 4699 GTGGTGACCCGCAACCTCAACAAGGTCATCGACGTTAACTACTATCCCGTGGCCGAGGCG 4758 Query 55187 CGCAAGTCCAACCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATC 55246 |||||||||||| | || ||||| ||||||| |||||| || |||||| | || ||| | Sbjct 4759 CGCAAGTCCAACATGCGCCACCGCCCCATCGGCATCGGCGTCCAGGGCCTCGCGGACGCC 4818 Query 55247 TTCATGATGCTCGGATTGCCC-TTCGACTCGGAACCTGCTCGAGAAATTAACCAGGACAT 55305 ||||| | | | | | | | ||||| || | || || || | ||| || |||| Sbjct 4819 TTCATCCTCAT-GAACTACGCGTTCGAGAGCGAGCAGGCCCGCGAGCTCAACAAGAACAT 4877 Query 55306 CTTC-AGTCGCATCTACTTTGCAGCGCTCGAGGAGTCG-TGTCATCTGGCTATGAGCGAG 55363 |||| || || ||||||| || || ||||| ||| || || | | |||| | Sbjct 4878 CTTCGAGACG-ATCTACTACGCCGCCGTCGAGACGTCCATGGAGATTGCCAAGGAGCTCG 4936 Query 55364 GGGACCTACGAGACGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTA 55423 | ||||||||||||||| | ||||| || |||||| | |||||||||| | Sbjct 4937 GCC-CCTACGAGACGTTCCAGGGCTCGCCGGCCAGCAAGGGGATCTTCCAGTTCGACATG 4995 Query 55424 TGGGGCAAGTCTGACCCCAT------GTTT---GA-------------CAAGTTGAAGCA 55461 |||||| ||| ||||| | || | || |||| ||| Sbjct 4996 TGGGGC--GTC--ACCCCGTCCTCGGGTCTCTGGAACTGGGCGGCGCTCAAGGAGAACGT 5051 Query 55462 TGACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTC 55521 | || ||| || || |||||||| ||||| ||||| || ||||| || || || Sbjct 5052 GGTCAAACAC------GGTCTTCGCAACTCGCTGCTGGTGGCCCCCATGCCCACGGCTTC 5105 Query 55522 GACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCT 55581 ||||| |||||| | |||||||||||| | ||||||| |||||| ||||||| ||| Sbjct 5106 CACGGCCCAGATCCTAGGCAACAACGAGTCCATCGAGCCCTACACGTCCAACATGTACAA 5165 Query 55582 GCGCCGGACCCTAGCAGGTGAGTTTGTCATGATC---AACAAGCACCTCGTCAAGGACCT 55638 ||||| || || ||||||| ||| |||| |||||| |||| | ||||| || Sbjct 5166 CCGCCGTGTGCTGGCCGGTGAGT---TCACGATCGTGAACAAGTACCTGATGAAGGAGCT 5222 Query 55639 GCAGAAGATCAACAAGTGGA-ACCCGCAGATC-AAGACGGATATTGTGCGGAACGGGGGG 55696 || | || |||| ||||| | | | | ||| || || |||| || Sbjct 5223 CATTGAGCTGGGCATCTGGACACCCGACGTGCGCAATCAGATCCTGAACG--ACGGCGGC 5280 Query 55697 TCCGTCCAGAATCTGGAG---ATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGG 55753 ||||| ||||| || || || || | ||||||||| ||| |||||||||| Sbjct 5281 TCCGTGCAGAAGGTGAAGGCCATCCCCGATCACGTCAAGGAGAAGTACAAGACGGTGTGG 5340 Query 55754 GAGATTCCACAGAAG--AGT-CTGATTGACATGAGTGCTGATCGTGGTGCGTACATCGAC 55810 ||||| |||||| ||| ||| ||| || || || || ||||| ||||| | Sbjct 5341 GAGATCAAGCAGAAGGCAGTACTG---GACTTGTCGGCCGACCGCGGTGCCTACATTTGC 5397 Query 55811 CAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATG 55870 ||| ||||| || |||||| ||| | | || | | |||| | | |||||| Sbjct 5398 CAGAGTCAGTCGCTCAACATCCACATCGCCGACCCGACCATCAGCAAGCTCACGTCGATG 5457 Query 55871 CACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTATGTACTATCTGCG 55920 ||||| |||| ||||||||||| |||||||| || |||||||| |||| Sbjct 5458 CACTTCTACGCCTGGAAGAAGGGGCTCAAGACCGGCATGTACTACATGCG 5507 >seq5612 Length=1235 Score = 136 bits (150), Expect = 4e-27 Identities = 541/826 (65%), Gaps = 29/826 (4%) Strand=Plus/Plus Query 74456 CTTTGAATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTT 74515 ||| || || || || || ||||| ||||| ||||||||||| || | || |||||| | Sbjct 283 CTTGGAGTACTCGCCCACGCGCTTCTCAAAGAAGTTGGTCTTGCCCTGCAGCGAGATCAT 342 Query 74516 CTCCATCCAGTCGAAAGGGTTCTTTGCACCGTAAATA--GGCTTCTCCCCAAACTGTGC- 74572 |||||||||||||| |||||||| | ||| || || | ||| | || | Sbjct 343 GTCCATCCAGTCGAACGGGTTCTTGACGTTGTAGATCTTGGACACGCCC---AGTGAGTA 399 Query 74573 CATGAGGCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGAT 74632 || ||||| || ||||| || | |||||||| ||| ||| | |||||| || Sbjct 400 CAGCAGGCGGTCGGCCACGAACTCGATGTACTGGCACATGAGCGCCGAGTTCATGCCAAT 459 Query 74633 GAGTTTGCAC-GGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGA 74691 ||| | ||| ||||| | ||| | ||||| ||| | || | | | | | | Sbjct 460 GAGCTC-CACAGGCAGCGAATCGCACACGAACTCGTGCTCAA--TCACCACCGCGTCGCG 516 Query 74692 CA--ATCTTGTGAATGT--CTTTGGAAGGGCA-CTTTTCCCTCAGGTGAGAGTAAA-GCG 74745 || |||| ||| | | |||| | |||| ||| | || | ||||| | | | Sbjct 517 CACGATCTCGTGCACGCGGCTTTCG---GGCAGCTTGTTGACGAGCTTCGAGTACATGAG 573 Query 74746 TCACGGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAA 74805 |||| | || ||| ||| ||||| |||| ||| || | || ||||| || | Sbjct 574 GCACG-CGAAGTCCGTGTGCATACCTTCGTCTCGGCTGATGAGCTCGTTCGAGAAGCTCA 632 Query 74806 GGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGA 74865 | |||||||| || || |||||||| | ||| ||||||| ||||| || || ||| | Sbjct 633 GACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAACGAGCCCGAGAAAA 692 Query 74866 AGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTG-CA-TCGGAAGT 74923 ||||||| || || || || || | || || | || | ||| | || ||| || Sbjct 693 AGATGCCCTCCACGGCAGCGAACGCCAGCAGACGCTCCGGGTACGACGACACTCGCGGGT 752 Query 74924 CAT-CCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCT 74981 | ||| | | ||||| | ||||| ||||| ||| |||| || ||||| || Sbjct 753 CGCACCACTTGAGCGCCCAGTGCGCTTTCTTCTTGAC-GCACGGGATCGTCTCGATGGCA 811 Query 74982 TGGAAGAGGCTTGCCTTCTCT-TCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTA 75040 | | ||| |||||| ||| | ||||||| | | ||||| | || ||||| Sbjct 812 CGCAGCAGGTGGTTCTTCTCCATCGTG-TCCTTGATGTAGGTATCAATGAGCAGCGAGTA 870 Query 75041 CGTCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTG 75099 | ||| | || || |||| || ||| |||| | ||||||| | || |||| | Sbjct 871 CACCTCGGCGTGGATGTTCTCGATGG-CGATCTGGAAGCCGTAGAAGCAGCGGACCTCGG 929 Query 75100 CAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGG 75159 | ||| || || || || |||||| | | ||||| | ||||||||||| || Sbjct 930 GCACCTGCACTTCGTTGCTGAAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCGCTGG 989 Query 75160 CGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCC 75219 ||||||| || ||||| || ||||| ||| ||||| | ||| || | ||| ||| Sbjct 990 CGGCGAAGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCTGGTTGGCCC 1049 Query 75220 AATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 | ||||| ||||| | || || | ||||||| |||||||||| Sbjct 1050 AGTCCTTGAGGTCGTGCACCTGGTCCAGCTCCTCGGCCGTCCAGAA 1095 >seq447 Length=40481 Score = 136 bits (150), Expect = 4e-27 Identities = 247/359 (69%), Gaps = 2/359 (1%) Strand=Plus/Minus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || || ||||| || || |||||||| || | |||||| | ||| || ||| | Sbjct 24747 CCTGTTCCGATACCGTCACTGCCGTTGACAAGCACCATCGGGATAATTGGAATGTACCAT 24688 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACG-TATTTCAAAACGGAATTGTCAGCCGG 151994 |||||||| | | || ||||| || ||| | || || | ||| |||||| || Sbjct 24687 TCCGGCTCGATCGACTGGCCGTCTTCG-TCAAGATACTTAAGCACGTCGTTGTCAAGTGG 24629 Query 151995 ATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGC 152054 |||| | ||||| ||||| | | ||| ||||| || || || | ||||||||| Sbjct 24628 ATCGTAGATCCGGCGAGTAAGCTGTTCCAAGTTGGTGAAAATATAACGTGCGCTGGCCGC 24569 Query 152055 ATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTT 152114 ||||||||| || || ||||| |||||||| || ||| ||||||| || ||| Sbjct 24568 ATCCTTGCCGCCCATCAAACGCGTACCAAACTGACCGATCGGCGACAGGAGGTGGACGTT 24509 Query 152115 GTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACC 152174 |||| || || |||| ||| |||| || ||||| || |||| |||| || || Sbjct 24508 GTTGCTTCCAACAAAATCCTGGGCCATGTTTACAATACAACCTTGCAAACTCTGCTCGCC 24449 Query 152175 GTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCG 152233 |||||| ||||| | ||||| | || || || |||| ||||||||||| | |||| Sbjct 24448 GTGGTGGTACGCAGAGTGCTCGGAGACATAGCCAGCCAGTTGCGCCACCTTTAGTTCCG 24390 Score = 125 bits (138), Expect = 8e-24 Identities = 242/352 (69%), Gaps = 4/352 (1%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || ||||||||||| || || || | || | |||||| | | |||| ||| | Sbjct 24747 CCTGTTCCGATACCGTCACTGCCGTTGACAAGCACCATCGGGATAATTGGAATGTACCAT 24688 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACG-TACTTGAGCACCGCATTGTCACTCGG 117270 || ||||| | | | | ||||| || || | | ||||| ||||| | |||||| || Sbjct 24687 TCCGGCTCGATCGACTGGCCGTCTTC-GTCAAGATACTTAAGCACGTCGTTGTCAAGTGG 24629 Query 117271 ATCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGC 117330 |||| | || || | || | | | |||||||| ||||| | ||| || || Sbjct 24628 ATCGTAGATCCGGCGAGTAAGCTGTTCCAAGTTGGTGAAAATATAACGTGCGCTGGCCGC 24569 Query 117331 ATCCTTGCC-ACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGT 117389 ||||||||| ||| ||| ||||||||| || || || ||||| || ||||| | || Sbjct 24568 ATCCTTGCCGCCCATCAA-ACGCGTACCAAACTGACCGATCGGCGACAGGAGGTGGACGT 24510 Query 117390 TGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCAC 117449 ||||| || ||||| | || |||| ||| ||||| |||||| | ||| ||| | Sbjct 24509 TGTTGCTTCCAACAAAATCCTGGGCCATGTTTACAATACAACCTTGCAAACTCTGCTCGC 24450 Query 117450 CATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTT 117501 | ||||| ||||| | ||||| | || ||||| ||||| || |||||||| Sbjct 24449 CGTGGTGGTACGCAGAGTGCTCGGAGACATAGCCAGCCAGTTGCGCCACCTT 24398 >seq51 Length=78767 Score = 118 bits (130), Expect = 1e-21 Identities = 190/273 (70%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 152028 CGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTG 152087 |||||| || || || | ||| || ||||||||||| || || || ||||| ||||| Sbjct 15196 CGTGAAAATATAACGAGGGCTTGCTGCATCCTTGCCTCCCTGCAAACGAGTTCCGAACTG 15255 Query 152088 TCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 || || || | || || |||||||| | |||||||||| ||| |||| || || Sbjct 15256 GCCGGACGGATACAGCAGCGGAAGGTTGTTAGAACCCACGAAATCCTGCGCCATGTTTAC 15315 Query 152148 AATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207 ||| || |||| | || |||||||| || ||||| || || | ||| || Sbjct 15316 AATTGTAGAGTGCAATGAAGTCTCGCCGTGGTGGTAGGCCGTATGTTCACTGCAGTAACC 15375 Query 152208 CGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCAC 152267 || | |||||||||||||| || ||||||| || ||| ||||| || | | ||| Sbjct 15376 AGCAAGCTGCGCCACCTTCACCTCGCTCGTCAGCTTGCGCTTCAGACAAGCAAATAGCAC 15435 Query 152268 CTTGCGCTGGGATGGTTTCAAACCGTCCACCAC 152300 ||| ||||| || ||| | ||| || ||||| Sbjct 15436 CTTACGCTGTGAGATTTTGAGACCATCGACCAC 15468 Score = 107 bits (118), Expect = 2e-18 Identities = 177/250 (71%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCC-ACCAGCAAGACGCGTACCGAATTG 117363 |||||||| ||||||| |||||| ||||||||||| || |||| ||| || ||||| || Sbjct 15197 GTGAAAATATAACGAGGGCTTGCTGCATCCTTGCCTCCCTGCAA-ACGAGTTCCGAACTG 15255 Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423 || ||| | || || |||||||| | ||||| || | || |||| ||| || Sbjct 15256 GCCGGACGGATACAGCAGCGGAAGGTTGTTAGAACCCACGAAATCCTGCGCCATGTTTAC 15315 Query 117424 AATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTC-CGCCACGTAGC 117482 ||| ||| || | | ||| || ||||| || ||||| || || | || ||| | Sbjct 15316 AATTGTAGAGTGCAATGAAGTCTCGCCGTGGTGGTAGGCCGTATGTTCACTGCA-GTAAC 15374 Query 117483 CCGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCA 117542 | || ||||| |||||||||| || |||||| || ||| || || ||| | | || Sbjct 15375 CAGCAAGCTGCGCCACCTTCACCTCGCTCGTCAGCTTGCGCTTCAGACAAGCAAATAGCA 15434 Query 117543 CCTTGCGCTG 117552 |||| ||||| Sbjct 15435 CCTTACGCTG 15444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547173111946000