Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq18936 98.7 1e-15 >seq18936 Length=24579 Score = 98.7 bits (108), Expect = 1e-15 Identities = 128/175 (73%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || ||||| ||||| || || |||| ||| ||||| |||||||| ||||| ||||| Sbjct 20725 ATGTACGTGTCGATCAGCAGCGAATACACTTCCGAGTGGATGTTCTCGATGGCGATCTGG 20666 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC--GCTA 17351 || ||||| ||||| || ||||||| | || || || | ||| |||| || | Sbjct 20665 AAGCCGTAGAAGCAGCGAGCTTCCGGCACCTGCACCTCGTTGCTGAA--GTTCATTGCCA 20608 Query 17352 GATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAAT 17406 | || ||||||||||||||||| || || || || ||||||| | ||||| || Sbjct 20607 GGTTCTCGTTCACGATGCCGTCACTGGCAGCAAAGAACGCCAGCACGTGCTTGAT 20553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517419234772440