Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq18936 113 5e-20 >seq18936 Length=24579 Score = 113 bits (124), Expect = 5e-20 Identities = 131/175 (75%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || ||||| || ||||| | |||| ||| ||||| |||||||| ||||| ||||| Sbjct 20725 ATGTACGTGTCGATCAGCAGCGAATACACTTCCGAGTGGATGTTCTCGATGGCGATCTGG 20666 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCC--GCCA 16589 || || |||||||| ||||| |||| | || || || | || |||| |||| Sbjct 20665 AAGCCGTAGAAGCAGCGAGCTTCCGGCACCTGCACCTCGTTGCTGAA--GTTCATTGCCA 20608 Query 16590 GGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAAT 16644 ||||||| |||||||| |||||||| |||||||| ||||||| | |||||| || Sbjct 20607 GGTTCTCGTTCACGATGCCGTCACTGGCAGCAAAGAACGCCAGCACGTGCTTGAT 20553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511289531781560