Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq17656 91.5 1e-13 >seq17656 Length=11375 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| || || || ||||||| ||| || ||||| ||||| || |||| || | ||| Sbjct 995 ATGGCGCTGCCACCGTGTCACATGTTCTGCCAGTTCTACGTGGCGGACGGAGAGCTCTCC 936 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 ||||| | |||||| | || | || ||||| || || || |||||||||||||| | Sbjct 935 TGCCAGATGTACCAGCGCTCAGCCGACATGGGACTCGGCGTGCCGTTCAACATTGCAAGC 876 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATT 19151 || || || || || |||| || || || | || || ||| | || || || || Sbjct 875 TACGCGCTGCTCACGCGGCTAGTGGCACAAGTGGCCGGGCTGAAACCAGGTGAATTCATC 816 Query 19152 CATACAATGGGGGATGCACATATTTACTTGAATCA 19186 || || || || || ||| ||||| |||| || Sbjct 815 CACGTGATTGGTGACGCGCATGTTTACCTGAACCA 781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399408894701985