Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq18510 122 7e-23 >seq18510 Length=33167 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | || || | || | ||| || || || || |||||||| ||| Sbjct 31718 ATGCCACCACGCAGACGCAGCACCAGGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCG 31659 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || || || || || || || |||||| |||| |||||||| ||||| || Sbjct 31658 CTCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGC 31599 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| |||||| || || | | |||| | ||| | || || Sbjct 31598 GGAATGCCTTCCTTGTCCTGAATCTTCTGCTTCACATTGTCAATAGAGTCCGAGGGCTCC 31539 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| | ||| | ||| ||||| ||||| || || || || |||||||| Sbjct 31538 ACGTCGAGGGTGATCGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCAT 31489 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | || || | || | ||| || || || || |||||||| |||||| Sbjct 31943 CCACCACGCAGACGCAGCACCAGGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCGCTC 31884 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || || || || || || || |||||| |||| |||||||| ||||| || ||| Sbjct 31883 AGCGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGCGGA 31824 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 |||||||| ||||| |||||| || || | | |||| | ||| | || || ||| Sbjct 31823 ATGCCTTCCTTGTCCTGAATCTTCTGCTTCACATTGTCAATAGAGTCCGAGGGCTCCACG 31764 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | ||| | || ||||| ||||| || || || || ||||||||| Sbjct 31763 TCGAGGGTGATTGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCATG 31716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420034383461196