Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq19255 111 6e-19 >seq19255 Length=18641 Score = 111 bits (122), Expect = 6e-19 Identities = 199/286 (70%), Gaps = 10/286 (3%) Strand=Plus/Minus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 ||||| | || || ||||| ||||||||||| | ||||| |||||||| ||||| || Sbjct 6825 GCAGTGGTGACGGTGCCCGCGTATTTCAATGACTCGCAACGCCAAGCAACAAAAGACGCT 6766 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || ||||||||||| ||||| || || ||||| || ||||| || || ||||| | Sbjct 6765 GGCGCCATTGCTGGTTTGAATGTGCTGCGTATTATCAACGAACCCACTGCCGCTGCAATT 6706 Query 451442 GCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTT 451501 || || || | ||| ||| | | | ||| | ||| | || | |||||| | Sbjct 6705 GCCTACGG-TTTGGA----CAAGA-AGGGTGGAGAGCACAATGTGTTGATCTTTGATCTC 6652 Query 451502 GGTGGAGGAACTCATGATACTTCT--GTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559 |||||||||| ||| || ||| | || | |||||||| || | || || || | Sbjct 6651 GGTGGAGGAA--CATTCGACGTCTCGCTTCTCACTATTGAAGACGGTATTTTCGAGGTGA 6594 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 |||| || ||||| || ||||| || |||||||| |||| || Sbjct 6593 AGGCGACGGCAGGTGACACGCATCTGGGCGGTGAAGACTTTGACAA 6548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975223943747564