Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq5240 86.0 7e-12 >seq5240 Length=4344 Score = 86.0 bits (94), Expect = 7e-12 Identities = 117/160 (73%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 159625 GGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTA-GCAAAACC 159683 |||| |||||| || | || || || || | || || ||||| | ||| |||| || Sbjct 3439 GGTGCTCAGGTCTACATGGACGGCGCTAACATGAACGCTCAGGTTGCTCTTTGCAA--CC 3496 Query 159684 ATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCAC 159742 || | ||| ||||| ||||| |||||||| ||| | || ||||||||||| || || | Sbjct 3497 CTGGGGATATTGGTGCCGATGTGTGTCATCTGAACCTGCACAAGACATTCTGCATCCCGC 3556 Query 159743 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGC 159782 | || ||||| || ||||| || ||| | || ||||| || Sbjct 3557 ACGGTGGTGGCGGCCCTGGTGTTGGTTCCATCGGTGTGGC 3596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587907619948880