Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq18510 95.1 1e-14 >seq18510 Length=33167 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||| || || ||||| || | || ||||| || || ||| |||| |||| | Sbjct 31486 AAGATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACGATCACCCTCGACGTGGAGCCC 31545 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || || | | | | || || || |||||| || || |||||| | || || Sbjct 31546 TCGGACTCTATTGACAATGTGAAGCAGAAGATTCAGGACAAGGAAGGCATTCCGCCTGAC 31605 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||| | || || | || || || ||||||||||||| | || || |||||| Sbjct 31606 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACGCTGAGCGACTAC 31665 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| || |||||||| ||||||||| ||||| || | |||| || || Sbjct 31666 AACATCCAGAAGGAGTCGACGTTGCACCTGGTGCTGCGTCTGCGTGGTGG 31715 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | || ||||| || || ||| |||| |||| | Sbjct 31717 ATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACAATCACCCTCGACGTGGAGCCCTCG 31776 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || || || |||||| || || |||||| | || || ||| Sbjct 31777 GACTCTATTGACAATGTGAAGCAGAAGATTCAGGACAAGGAAGGCATTCCGCCTGACCAG 31836 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || ||||||||||||| | || || ||||||||| Sbjct 31837 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACGCTGAGCGACTACAAC 31896 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAA 107785 || || |||||||| ||||||||| ||||| || | |||| || || || Sbjct 31897 ATCCAGAAGGAGTCGACGTTGCACCTGGTGCTGCGTCTGCGTGGTGGCAA 31946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398781844012237