Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq14262 93.3 6e-14 >seq14262 Length=69546 Score = 93.3 bits (102), Expect = 6e-14 Identities = 168/233 (72%), Gaps = 31/233 (13%) Strand=Plus/Minus Query 142750 ATGAAAACGGTCAAA-----ATTCAGTAAAATGGA---CA-AGACCGTCGG-TGT-AGCT 142798 ||||||||||||||| || ||| ||||||| || |||||||||| | | | | Sbjct 63780 ATGAAAACGGTCAAAGGTATATCCAG--AAATGGAGTGCAGAGACCGTCGGCTATGATCA 63723 Query 142799 AAAGGGTAACCTTTAGTGATAT---CGCTATCGACTGGGTCATCAATCGGTCACCCTTAT 142855 | | | || | || ||| || ||||| |||||||||||| | ||| || | Sbjct 63722 ATACGTTA---TGTATTGACATGGTCGCTAACGACTGGGTCATTTGTGGGT-----TTCT 63671 Query 142856 TTTAAGGGAGGCTCAATGTACAGTC-AGGCCACCATAAGGATCCTTTATAACCAGGGATA 142914 ||| | | || || ||||||||||| | ||| |||||| || | |||| | | || Sbjct 63670 TTTCAAGAAG-CTTAATGTACAGTCTATCCCAGCATAAGT---CTAT-TAACAATAGGTA 63616 Query 142915 CGAGTGGTGCTC-ATGTGATCGAGCGAATTGAAAATTGAAACTCGGGAAGCAT 142966 | |||| ||||| |||||||||| |||||||||||||||| ||||||||||| Sbjct 63615 CAAGTGCTGCTCTATGTGATCGAATGAATTGAAAATTGAAATTCGGGAAGCAT 63563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704410367399760