Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq14049 96.9 8e-15 seq14048 96.9 8e-15 >seq14049 Length=3113 Score = 96.9 bits (106), Expect = 8e-15 Identities = 170/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 ||||||||||||| ||||| |||| || ||| || || ||| ||| | | Sbjct 1550 GCGTCCTTGTAGAGCATGAACGGCACGCCCGTCTCAATCTGCGCGTCCAGGATGGCGAAC 1491 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || || | ||||| || | || | | || | ||| || || ||||| |||| || Sbjct 1490 CACAGCTGCTGGGCGTTGATCGTCTTGCGGGCACGTCCCTCCTTCTCGTACTTCTCGTAC 1431 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 || |||||| |||| || | | || ||| | |||||||| |||||||| || Sbjct 1430 AGCGTTTCGAACTCCTCACCCCAGCACTTGTAGAGATCAGGAGCTTCGTTCGGACAGAAC 1371 Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346 | |||||| || |||| || |||||| | ||||||||| ||||||| ||| | ||| Sbjct 1370 AAACTCCACTTGCCATTGGCCTCGACGCGCTTCATGAACAGGTCGGGCACCCACAGGGCG 1311 Query 173347 TAGAACAA 173354 |||||||| Sbjct 1310 TAGAACAA 1303 >seq14048 Length=3126 Score = 96.9 bits (106), Expect = 8e-15 Identities = 170/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166 ||||||||||||| ||||| |||| || ||| || || ||| ||| | | Sbjct 1550 GCGTCCTTGTAGAGCATGAACGGCACGCCCGTCTCAATCTGCGCGTCCAGGATGGCGAAC 1491 Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226 || || | ||||| || | || | | || | ||| || || ||||| |||| || Sbjct 1490 CACAGCTGCTGGGCGTTGATCGTCTTGCGGGCACGTCCCTCCTTCTCGTACTTCTCGTAC 1431 Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 173286 || |||||| |||| || | | || ||| | |||||||| |||||||| || Sbjct 1430 AGCGTTTCGAACTCCTCACCCCAGCACTTGTAGAGATCAGGAGCTTCGTTCGGACAGAAC 1371 Query 173287 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 173346 | |||||| || |||| || |||||| | ||||||||| ||||||| ||| | ||| Sbjct 1370 AAACTCCACTTGCCATTGGCCTCGACGCGCTTCATGAACAGGTCGGGCACCCACAGGGCG 1311 Query 173347 TAGAACAA 173354 |||||||| Sbjct 1310 TAGAACAA 1303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181525029770893