Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq17656 104 2e-17 >seq17656 Length=11375 Score = 104 bits (114), Expect = 2e-17 Identities = 152/213 (71%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 142570 GCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATGATGTTCCAA 142629 ||||||||||| || || | |||| ||||| || || |||||||||||| | | ||| Sbjct 1022 GCGTGGAACCCCGCCGATCTGAACGAGATGGCGCTGCCACCGTGTCACATGTTCTGCCAG 963 Query 142630 TTCCACGTCGACTCGAAGAAGCGTCTGTCATGCCAGCTGTATCAGCGTTCGGCAGACTGG 142689 ||| |||| | || | || | || || |||||| |||| ||||| || || ||| | Sbjct 962 TTCTACGTGGCG--GACGGAGAG-CTCTCCTGCCAGATGTACCAGCGCTCAGCCGACATG 906 Query 142690 TTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCACACAGCTCATTGCTCGC 142749 |||||||| |||||||||||||| |||||||| ||||| | ||| | || | Sbjct 905 GGACTCGGCGTGCCGTTCAACATTGCAAGCTACGCGCTGCTCACGCGGCTAGTGGCACAA 846 Query 142750 GAATGCGGTCTGGAACTCGGAGACTTCGTCCAC 142782 | ||| ||| ||| || || ||| ||||| Sbjct 845 GTGGCCGGGCTGAAACCAGGTGAATTCATCCAC 813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500376996864080