Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq17300 100 3e-16 >seq17300 Length=26109 Score = 100 bits (110), Expect = 3e-16 Identities = 128/173 (74%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 5346 GATGAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTCTTGGCCGA--AGTTG 5403 ||| ||||||||||||||||| || ||| ||| ||| |||| | |||||| |||| Sbjct 14818 GATCAGCTGCGCCACGCGGTCTCCGCGCTTCACGGGGAA-GTCT-TCGGCCGAGTGGTTG 14875 Query 5404 AAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCCCGCTCCCACATCC 5463 || || | ||| |||| ||| || ||| |||| | ||| | |||||||| ||| || Sbjct 14876 AACAGGATCACGCCCACGTTGCCGCGGTAGTCAGCGTCGATCACGCCCGCGCCCGTGTCA 14935 Query 5464 ACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTAGCAGCC 5516 | ||| || || | ||||| ||||| | |||||||| || |||||||||| Sbjct 14936 ATGAACTTCTTAAGTGCGAGGCCGGAGCGAGGCGCCACACGCGCGTAGCAGCC 14988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447701861297880