Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq14049 87.8 6e-12 seq14048 87.8 6e-12 >seq14049 Length=3113 Score = 87.8 bits (96), Expect = 6e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 254972 GGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGC 255031 || || || || ||| || | ||||| ||| || ||||||||| || || || || || Sbjct 1132 GGGATCATCCCCATGCTCAGAGTGTTTAACGACACGGCTCGCTATGTGGACCAGGGAGGA 1191 Query 255032 GGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGAC 255082 ||||||||| ||| ||||| |||| ||| ||||||||||||| |||||| Sbjct 1192 GGCAAACGCAAGGGATCGTTCGCCATTTACTTGGAGCCGTGGCATGCCGAC 1242 >seq14048 Length=3126 Score = 87.8 bits (96), Expect = 6e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 254972 GGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGC 255031 || || || || ||| || | ||||| ||| || ||||||||| || || || || || Sbjct 1132 GGGATCATCCCCATGCTCAGAGTGTTTAACGACACGGCTCGCTATGTGGACCAGGGAGGA 1191 Query 255032 GGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGAC 255082 ||||||||| ||| ||||| |||| ||| ||||||||||||| |||||| Sbjct 1192 GGCAAACGCAAGGGATCGTTCGCCATTTACTTGGAGCCGTGGCATGCCGAC 1242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587938492609185