Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq17656 116 3e-21 >seq17656 Length=11375 Score = 116 bits (128), Expect = 3e-21 Identities = 184/264 (70%), Gaps = 0/264 (0%) Strand=Plus/Plus Query 118468 AGTGGCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCA 118527 || ||||||| ||| |||| || ||||| || || ||||| || ||||||||||| Sbjct 769 AGAGGCTCAACGTGGTTCAGGTAAACATGCGCGTCACCAATCACGTGGATGAATTCACCT 828 Query 118528 GGTGTAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTA 118587 ||| | ||||| | || || || | | || | || |||||| || | || Sbjct 829 GGTTTCAGCCCGGCCACTTGTGCCACTAGCCGCGTGAGCAGCGCGTAGCTTGCAATGTTG 888 Query 118588 AAAGGAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCG 118647 || || || || || |||||||| ||||| | |||||||| ||||| |||||||| ||| Sbjct 889 AACGGCACGCCGAGTCCCATGTCGGCTGAGCGCTGGTACATCTGGCAGGAGAGCTCTCCG 948 Query 118648 TTTGCAACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCATGGAACTCAGTTGG 118707 | || || || ||||| | | |||||||| || ||||| |||| |||| | | Sbjct 949 TCCGCCACGTAGAACTGGCAGAACATGTGACACGGTGGCAGCGCCATCTCGTTCAGATCG 1008 Query 118708 GCAGGATTCCAGGCTGTTAAAACA 118731 || || ||||| || | |||||| Sbjct 1009 GCGGGGTTCCACGCAGACAAAACA 1032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414378130300612