Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20cryptogea_20[genbank_20GCA_5F000468175.2_202016-07- 21] 19,533 sequences; 63,839,274 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq18936 87.8 2e-12 >seq18936 Length=24579 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/165 (72%), Gaps = 1/165 (1%) Strand=Plus/Minus Query 4813 CTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAA 4872 ||||| | || ||||| || || || ||||| ||| || || || || || || || | Sbjct 20729 CTTGA-TGTACGTGTCGATCAGCAGCGAATACACTTCCGAGTGGATGTTCTCGATGGCGA 20671 Query 4873 TCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTA 4932 |||| || ||||| ||||| | |||||| | || || || ||||| | || | | Sbjct 20670 TCTGGAAGCCGTAGAAGCAGCGAGCTTCCGGCACCTGCACCTCGTTGCTGAAGTTCATTG 20611 Query 4933 CTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCA 4977 | | ||| ||||| || || ||||||||||| ||||| ||||||| Sbjct 20610 CCAGGTTCTCGTTCACGATGCCGTCACTGGCAGCAAAGAACGCCA 20566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426947937239489