Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F000686205.3_202014-12- 01] 1,616 sequences; 73,680,304 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1029 127 2e-24 >seq1029 Length=318196 Score = 127 bits (140), Expect = 2e-24 Identities = 190/267 (71%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 |||||||||||| ||| || || |||||||||| ||| || ||| |||| || |||||| Sbjct 189387 CCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCAGGCGTGAGGCCGCGCTTC 189328 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| |||| || || || |||||||||||||| |||||||| |||||| Sbjct 189327 TTGAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCCACGGTTGCGAAC 189268 Query 126185 GCAAAGAGACGCTCAGCAAAGGAGCGCGACT-TTGTGTCAAACCACTTCATCGCCCACTG 126243 | | | ||||| | | || || ||| | ||| ||||||| | |||||| || Sbjct 189267 GTCAGCACGCGCTCCGGGTACGA-CGACACTCGCGGGTCGCACCACTTGAGCGCCCAGTG 189209 Query 126244 CGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCTGA 126303 ||| || |||| | |||||| | || | ||| || | || | | ||| || | Sbjct 189208 CGCTTTCTTCTTCACACACGGAATCGTATCGATGGCACGCAGCAGGTGGTCCTTCTCCGT 189149 Query 126304 TGGATCTTTGATGTACTTATCTATGAG 126330 | ||| ||||||||| | || ||||| Sbjct 189148 CGCATCCTTGATGTACGTGTCAATGAG 189122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597341533457280