Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F000686205.3_202014-12- 01] 1,616 sequences; 73,680,304 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1029 100 3e-16 >seq1029 Length=318196 Score = 100 bits (110), Expect = 3e-16 Identities = 193/282 (68%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 || || ||| ||| | ||||| || ||| || || || || ||||||| ||||| Sbjct 189405 GCGAAGTCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCA 189346 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||| |||| || |||||||| | ||| | || | |||||| || || ||||||||||| Sbjct 189345 GGCGTGAGGCCGCGCTTCTTGAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATG 189286 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACT-TTGTGTCAAA 117452 |||||||| || |||| | | |||||| | | | || ||| ||| | ||| | Sbjct 189285 CCCTCCACGGTTGCGAACGTCAGCACGCGCTCCGGGTACGA-CGACACTCGCGGGTCGCA 189227 Query 117453 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 117512 ||| || | ||||| | ||| ||||||| | ||| || | || | |||||| | Sbjct 189226 CCACTTGAGCGCCCAGTGCGCTTTCTTCTTCACACACGGAATCGTATCGATGGCACGCAG 189167 Query 117513 TAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAAT 117554 | || | ||| || | ||||||| ||||| ||||||| Sbjct 189166 CAGGTGGTCCTTCTCCGTCGCATCCTTGATGTACGTGTCAAT 189125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589968882387840