Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F000686205.3_202014-12- 01] 1,616 sequences; 73,680,304 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq859 244 1e-58 seq1495 224 1e-52 seq1029 197 2e-44 seq926 176 6e-38 seq1140 161 1e-33 seq1062 143 3e-28 seq824 123 3e-22 seq1068 116 5e-20 seq863 109 7e-18 seq114 104 3e-16 seq1490 95.1 1e-13 seq1025 89.7 6e-12 seq885 86.0 8e-11 seq568 86.0 8e-11 >seq859 Length=70301 Score = 244 bits (270), Expect = 1e-58 Identities = 340/465 (73%), Gaps = 10/465 (2%) Strand=Plus/Minus Query 1573779 CCGTGGATCGAAAAGTATCGCCCTATGGTGCTCGACGACATTGTCGGCAACGAGCACGCC 1573838 |||||| | || ||||| || || ||||| | ||| | || |||||| || | Sbjct 12055 CCGTGGGTGGAGAAGTACCGGCCGCGCGTGCTGGCGGACGTGGTGGGCAACCGCGACACG 11996 Query 1573839 GTCGCCTATCT-CAGAGCGCTGGCTGCCGACGG-CGACATGCCCAACCTCTTGCTGGCGG 1573896 || || ||| ||| || |||| || | ||| | ||||| | ||||| | ||| ||| Sbjct 11995 GTGGCGAGTCTGCAG-GCCATGGC-GCAGGCGGGCAACATGACGAACCTGATCCTGTCGG 11938 Query 1573897 GTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGGCG 1573956 | ||||| ||||||||||||||||||||||| |||||||||||| | || |||||| Sbjct 11937 GCCCGCCGGGCACGGGCAAGACCACGAGCATTTTGTGTCTGGCGCGCGAGCTGCTGGGCG 11878 Query 1573957 CGGCCGCC-GACG-AGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGT 1574014 || || || | |||| ||||| || ||||||||||||||||| |||||| ||||| Sbjct 11877 --GCAGCATGAAGCAGGCGGTGCTGGAGCTCAACGCGTCGGACGACCGCGGCATCGACAC 11820 Query 1574015 CGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGAC-CTGCCGCCCGGACGCC 1574073 ||||||| | |||||| ||| ||| | | ||| ||||| || || |||| Sbjct 11819 GGTGCGCAGTAAGATCAAGATGTTCGCGCAGCAGAAGGT-GACGCTGCCCCCGGGCCGCC 11761 Query 1574074 ACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGC 1574133 ||||| | | ||||| ||||||||||||| | | ||||| |||||||||||||| |||| Sbjct 11760 ACAAGATCGTGATCCTGGACGAGGCCGACTCCATGACGTCCGCGGCCCAGCAGGCGCTGC 11701 Query 1574134 GGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGT 1574193 | ||||||||| | | | ||| |||||||| || ||||| ||||||| ||| Sbjct 11700 GCCGCACCATGGAGATCTTCTCGGCCACCACGCGCTTCGCGCTGGCCTGCAACAACTCGA 11641 Query 1574194 CGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCT 1574238 | | | |||| || || |||| || ||||||||||| ||||||| Sbjct 11640 CCAAGATCATTGAACCCATCCAGAGCCGCTGCGCCATCCTGCGCT 11596 >seq1495 Length=139450 Score = 224 bits (248), Expect = 1e-52 Identities = 310/431 (72%), Gaps = 2/431 (0%) Strand=Plus/Plus Query 18060 CATGAGCACATTCGGCAAGGTATTTAGGGTCACCACCTTTGGCGAGTCGCACGGGGCGGG 18119 ||||||||| |||||| | || | || || ||||| |||||||||||| | ||| Sbjct 71452 CATGAGCACCTTCGGCCGCTTCTTCCGCGTGACGACCTTCGGCGAGTCGCACTGCAAGGG 71511 Query 18120 CGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCA 18179 ||| ||||||||| | |||||||||||||||| || | ||| |||||||||||||||| Sbjct 71512 CGTAGGCTGCATCGTGGACGGCGTGCCGCCGTCGCTGGCGCTGACCGAGGCCGACATCCA 71571 Query 18180 GCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCC 18239 ||| ||| | || ||||| || |||||| || || | ||||||||| ||||| Sbjct 71572 GCCGCAGCTCACGCGCCGCCGCCCCGGCCAGAGCAAGCTCACGACGCCGCGCGACGAGAA 71631 Query 18240 CGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGG 18299 || || | |||| | ||||||||||| ||||| ||||||||| ||||||| | Sbjct 71632 GGACACGGTGACCATCATGAGCGGCACGGAGAAGGGCCTGACGCTCGGCACGCCCGTGGC 71691 Query 18300 CCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCC 18359 ||||| ||| ||||| || || ||| ||||| || ||| | ||||||| Sbjct 71692 GCTCTTCGTGCCCAACGAGAACGTCCGTCCCAAGGACTACAAGGAGATGGACCAGGTGCC 71751 Query 18360 GCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCA-TCAAGGCGTCGTCGG 18418 || ||| |||||||||||||| ||| | |||||||||| | | | | | | Sbjct 71752 TCGCCCCGGCCACGCCGACTACACGTACCAGATGAAGTACGGCACGCGCGCCAGCAGC-G 71810 Query 18419 GCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCG 18478 |||| |||||| | || ||||||||| || ||||| ||||| || || || |||| Sbjct 71811 GCGGCGGCCGGGCCAGCGCGCGCGAGACCATCGGCCGCGTGGCCGCTGGGGCCGTGGCCG 71870 Query 18479 AGAAATGGCTC 18489 |||| |||||| Sbjct 71871 AGAAGTGGCTC 71881 Score = 129 bits (142), Expect = 7e-24 Identities = 110/136 (81%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 19064 GGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTGCTTTGACAAGAT 19123 ||| ||||||||| ||||||| ||||| || || |||||||||||||| |||||||| Sbjct 72316 GGTCACGTGCGTGATCCGCAACGCGCCGGTGGGTCTGGGCGAGCCGTGCTTCGACAAGAT 72375 Query 19124 CGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGATTCGAGATTGG 19183 |||| | | | |||||||||||| |||| ||||||||||||||||| |||||||| || Sbjct 72376 GCAGGCGGTGTTGGCCCACGCCATGATGTCTATCCCGGCCACCAAGGGCTTCGAGATCGG 72435 Query 19184 CAGCGGGTTTGCGGGT 19199 ||||| ||||| Sbjct 72436 TTCGGGGTTCTCGGGT 72451 >seq1029 Length=318196 Score = 197 bits (218), Expect = 2e-44 Identities = 224/298 (75%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||||||||||||||||||||| ||||| ||| | |||| | || || Sbjct 189105 GAGTGGATGTTCTCGATGGCGATCTGGAAACCGTAGAAGCAGCGGGCCTCCGGTACCTGC 189046 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || || |||| ||||||||||||| |||||||||||||||||| ||||| Sbjct 189045 ACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGAAG 188986 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || ||||| ||||||||||| ||| ||||||| ||| | || | |||||| Sbjct 188985 AAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAGGTTCGCCCAGTCCTTC 188926 Query 869813 GTGTCG-GCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871 |||| || | ||||||| ||||||||| ||||||| ||||||||| || || ||||| Sbjct 188925 AGGTCGTGCAC-CAGGTCCAGCTCCTCGGCCGTCCAGAACGAGGCCTCCGCTTTCTTGTA 188867 Query 869872 CATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCG 869929 ||||| ||| || | || | |||| ||||| || || || ||||| ||||| ||| Sbjct 188866 CATCTGCCACACGTCGTGCTCCTGGATCGGGAACAGCACGAACCGGTTCGGGTTCTCG 188809 Score = 152 bits (168), Expect = 6e-31 Identities = 208/283 (73%), Gaps = 13/283 (5%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| || ||||||| ||||| ||| ||||| ||| |||||||||||||| Sbjct 189387 CCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCAGGCGTGAGGCCGCGCTTC 189328 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||| | |||||| ||||||||| ||||||||||| |||| || || Sbjct 189327 TTGAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCCACGGTTGCGAA- 189269 Query 869300 CCGATGAGC---CGCTCGGCAAAGGTGTCGA-GGCCCTC-CTTGTTGATCCACTTCATCG 869354 || | ||| ||||| | ||| ||| | | ||| | || | |||||| | || Sbjct 189268 -CG-TCAGCACGCGCTCCG----GGT-ACGACGACACTCGCGGGTCGCACCACTTGAGCG 189216 Query 869355 CCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCT 869414 |||||| || || ||| |||| |||| | ||| |||||||| || | |||||||||| Sbjct 189215 CCCAGTGCGCTTTCTTCTTCACACACGGAATCGTATCGATGGCACGCAGCAGGTGGTCCT 189156 Query 869415 TTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATA 869457 | || | || ||||||| || ||||| || || |||||||| Sbjct 189155 TCTCCGTCGCATCCTTGATGTACGTGTCAATGAGCAGCGAATA 189113 Score = 96.9 bits (106), Expect = 4e-14 Identities = 141/197 (72%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| |||||||| || ||||||||||| ||||||||||| | | |||||||||||| Sbjct 189582 AGCAGACGGTCGGCCACGAACTCGATGTATTGGCACATGAGCGCCGAGTTCATGCCGATC 189523 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 | |||| || ||||| || | ||| ||||| | ||||||| || | ||| | | Sbjct 189522 GACTCCACAGGGAGCGAGTCACGCACGAACTCGTGCTCGATCGTCACCCCGTCGCGCACG 189463 Query 868931 ATCTGCCTGGGCACGTCGG----CCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCA 868986 |||| | ||||| ||| ||| ||||||| || ||| | | ||| | ||||| Sbjct 189462 ATCT---CGTGCACG-CGGCTCCCCGGCAGCTTGTTCACCAGCTTGGAGTACATGAGGCA 189407 Query 868987 GGCAAAGTCGCAGTGCA 869003 || ||||| ||||| Sbjct 189406 CGCGAAGTCCGTGTGCA 189390 Score = 96.9 bits (106), Expect = 4e-14 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 || |||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 194125 GCATTGGAGTACTCGCCCACGCGTTTCTCGAAAAAGTTGGTCTTGCCCTGCAGCGAGATC 194066 Query 868751 AACTCCATCCACGGGAACGGGTT 868773 | |||||||| ||||||||| Sbjct 194065 ATGTCCATCCAATCGAACGGGTT 194043 >seq926 Length=67561 Score = 176 bits (194), Expect = 6e-38 Identities = 347/506 (69%), Gaps = 18/506 (4%) Strand=Plus/Minus Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGG-CGGGCCTGGTGCGCAGATAGTACATGC 1627039 || ||| ||||| |||| |||||||||||| ||||| | ||||| |||||||||| Sbjct 32037 CTTGTCCACGGTGAACTTGATGGCGTCGGCTTTCGGGCGTCC-GCGCATGTAGTACATGC 31979 Query 1627040 CGGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGC--GCTCGGGCGT 1627097 |||||||||| || ||| |||||| |||||||||||||| || ||| | || Sbjct 31978 CGGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATCGACGTGA-GCTTGCTGATG-GT 31921 Query 1627098 CGCGTCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGC 1627157 || ||||||| || | |||||||||||| |||||| | || | |||| ||||| Sbjct 31920 CGGGTCGGCGATGTGGATGTTGAGCGACTGACTCTGGCAAATGTACGCACCGCGGTCGGC 31861 Query 1627158 CGCCATGTCGATGGTGACCCGGTTGGGC---ACCTCCCACACGGTCTTGAAGATGGCCTT 1627214 || || ||| | ||| || || | ||||||||| |||||| | | |||| Sbjct 31860 CGACAGGTCCAGC---ACCGCCTTCTGCTTGATCTCCCACACCGTCTTGTACTTCTCCTT 31804 Query 1627215 GAGGTCGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGAG 1627274 || || | ||| | | | | | || |||||| |||||| | | || Sbjct 31803 GACGTGGTCCGGGATCGCCTTGACGTT------CTGCACGGAGCCGCTGTCGTTCAAGAT 31750 Query 1627275 CCTGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGGCG 1627334 | || ||| | ||| |||||||| | |||| || | ||||| ||| | ||||| Sbjct 31749 CTGGTTGCGCACGTCCGGCGTCCAGATGCCGAGCTCGATCAGCTCCTTCATCAGGTACTT 31690 Query 1627335 GTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGAC 1627394 |||||| | || || || || | ||||| ||||| |||| |||||| ||| Sbjct 31689 GTTGACGATCGTGAACTCTCCAGCCAGCACTCGGCGGTTGTACATGTTGGACGTGTACGG 31630 Query 1627395 CTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCAC 1627454 |||| | |||| |||| || |||||||| | ||| | ||||| |||||| | ||||| Sbjct 31629 CTCGATAGACTCGTTGTTTCCAAGGATCTGGGCCGTGGAAGCCGTCGGCATGGGGGCCAC 31570 Query 1627455 GAGGAGCGAGTTGCGCAGGCCGTGCT 1627480 || ||||||||||| || ||||||| Sbjct 31569 CAGCAGCGAGTTGCGGAGTCCGTGCT 31544 Score = 150 bits (166), Expect = 2e-30 Identities = 208/291 (71%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || |||||| ||||| ||||| ||||||||||| || || |||||||| | || ||| || Sbjct 30642 GCCCTGGTCCACGTACCGCGCGGTGTCGTTAAACACCCGCAGCATGGGGATGATGCCATT 30583 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 |||| |||||| ||||| | |||| | || ||| || | |||||| | Sbjct 30582 GGACGAGCCGTTCGTGCCTCGGATGTAGCTGTTGGTGGCTCGGATGTTGTGCATACTGAT 30523 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 ||| || || |||||| | || ||||| || || || || | ||||||||| ||||| Sbjct 30522 GCCAATACCTCCGGCCCATTTAGAGATACAGGCACATTGCTTTAACGTGTCGTAAATGCC 30463 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 || || |||||| | | |||| ||| || ||||| ||||| ||| ||| ||| ||| Sbjct 30462 TTCAATTGAGTCGTCTTGCATGGCCAATAGGAAGCAAGACGACAGTTGTGGGCGCGGCGT 30403 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACAT 1630352 ||||||||| || || || || || || ||||| ||| ||||||| Sbjct 30402 GCCGGCGTTAAAAAGTGTCGGGGTGGCATGCGTGAAAAACATTTGCGACAT 30352 Score = 107 bits (118), Expect = 2e-17 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 1628372 CGCCGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCAC 1628431 |||| ||||||| | || || || |||||| || ||| |||| ||| | |||| Sbjct 30868 CGCCCCAGCACTCATAGAGTCCAGGGGCCTCGTTAGGGCAATAGAGACTCCACTTGCCAT 30809 Query 1628432 CGGTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCG 1628491 || || | | ||| || || ||| | ||| || ||||| || |||||||| | Sbjct 30808 TGGCTTCCACCCTCTTCATGAACAGATCAGGCACCCAAAGGGCGTAGAACAGGTCGCGAG 30749 Query 1628492 CCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGT 1628551 | |||| | ||| |||||||||||||| |||||| | | |||| | || |||| Sbjct 30748 CGCGGTGCAACTCGTTGCCGTGGTTCTTACGGAGGTCCAAGAACTCGAACACATCTGCGT 30689 Query 1628552 GCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||| ||||||| ||| ||| |||| |||||| |||||||| ||||| Sbjct 30688 GCCAAGGCTCCAAATAGATGGCGAAGGAGCCCTTACGCTTGCCTCCGCC 30640 Score = 95.1 bits (104), Expect = 1e-13 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 1627791 GTAGACCGTCTCAAAGATGGCCCGGTTGAGGCGCCGCGCGCCGGCGCTCTCCCACGGCAG 1627850 ||||| ||||| |||||| | |||||| ||| || ||||||| ||| Sbjct 31380 GTAGATGGTCTCGAAGATGTTCTTGTTGAGCTCCCGGGCCTTCTCGCTCTCGAACGCGTA 31321 Query 1627851 GTCCATCATGGCAAACACGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCG 1627910 || ||| | | |||| |||| ||||||||||| ||||| | || || || ||||| || Sbjct 31320 GTTCATGAGGATAAACGCGTCCGCGAGGCCCTGGACGCCAATACCGATGGGGCGGTGACG 31261 Query 1627911 CAGGTTCGAGTGGCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAG 1627970 || ||| || | ||| |||||| ||| ||||||| ||||| |||||| || ||| | Sbjct 31260 CATGTTGGACTTGCGCGCCTCGATCACGGGGTAGTAGTTGACGTCGATGACCTTGTTTAA 31201 Query 1627971 GTTGC 1627975 ||||| Sbjct 31200 GTTGC 31196 >seq1140 Length=161489 Score = 161 bits (178), Expect = 1e-33 Identities = 254/361 (70%), Gaps = 2/361 (1%) Strand=Plus/Plus Query 92603 GGCGATCTGGCGCGTGAGGGCCTCCTGCACCTGGAAGCGGTCGGAAAACATGTCGACGAT 92662 ||||||||| ||||| |||||||||||| | |||| || || | ||| || Sbjct 151665 GGCGATCTGCTTGGTGAGTCGCTCCTGCACCTGCAGGCGGCGCGAGAAGACCTCGCTGAC 151724 Query 92663 GCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGTGGGCAGGTAGCCCACGTGGGCCTT 92722 ||||| || |||||| || || | | | |||| | || | |||||| | ||| |||| Sbjct 151725 GCGCGCGAGCTTGCTGAGCCCCAGCACCTTGCCGTTCGGGATGTAGCCGATGTGCACCTT 151784 Query 92723 GCCCATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCGACGTCGCGCACGAT 92782 |||| | || |||| || |||||||||||||||||| | | ||||| |||||||||||| Sbjct 151785 GCCCGTGAACGGCACCATGTGGTGCTCGCACATGGAGTACAGGTCGATGTCGCGCACGAT 151844 Query 92783 CACCATCTCGCCCGAGGCCTCGGCAAAGAGCGCGTCGCCGATGGCCTCGGCCAGCGTCAT 92842 ||||||||| | | |||| | || | || ||| | | |||||||| || Sbjct 151845 GACCATCTCGTCGTGGTCCTCCTCGAACACGGCCTCGTTCAGCACGTCGGCCAGGCTCTG 151904 Query 92843 GCGGTGGCCGCGCGTGCGCTCCACCATGGCCTTGGCCACGCGCATCGGCGTGTCCAGGAG 92902 || || ||| ||| | || || |||||||||| |||||| ||||| | || || Sbjct 151905 GCCGTAGCCCTTGGTGTTGTACAGCAGCGCCTTGGCCATGCGCATGGGCGTCTTCACCAG 151964 Query 92903 GCCCTCGCGCCGCA-CGTCCTCGCCCAGGCAGGCCAGCAGCGTCCTCGTGGCGTCGGCCA 92961 ||||| || |||| |||||| || | ||| | ||||||||| || ||| | |||| Sbjct 151965 CCCCTCACG-CGCAGGGTCCTCTCCGATGCACTCGAGCAGCGTCGTCACGGCCGCCGCCA 152023 Query 92962 T 92962 | Sbjct 152024 T 152024 >seq1062 Length=403632 Score = 143 bits (158), Expect = 3e-28 Identities = 166/221 (75%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | || || ||||||||||||||||||||||| || || Sbjct 29627 GCTTGGCGAGCTCACCCGGGAGCATAAGACGCACGGCGGTCTGGATCTCGCGGCTGGAGA 29568 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||| |||||| | ||| ||| ||||||||| | | ||||||| |||| | Sbjct 29567 GCGTCGACTTCTTGTTGTAACGCGACAGCTTGCCGGCCTCCGAGGCGATGCGCTCGAAGA 29508 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTG-TTGGAGATGCCCACGTCGGGG 1254521 ||||||||| ||||||||||||| |||||| | | | ||| ||||||| ||||||| Sbjct 29507 TGTCGTTGATGAACGAGTTCATGATCGACAT-GCCGCGCTTGCTGATGCCCGTGTCGGGG 29449 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 |||||||| ||||||||||||||| | | ||||||||| Sbjct 29448 TGCACCTGACGCAGCACCTTGTAGATGTAGGTCGAGTACGA 29408 Score = 143 bits (158), Expect = 3e-28 Identities = 195/269 (72%), Gaps = 5/269 (2%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | || || |||||||| |||||||||||||| || || Sbjct 197577 GCTTGGCGAGCTCTCCCGGGAGCATGAGACGCACGGCCGTCTGGATCTCGCGGCTGGAGA 197636 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||| |||||| | ||| ||| ||||||||| | | ||||||| |||| | Sbjct 197637 GCGTCGACTTCTTGTTGTAACGCGACAGCTTGCCGGCCTCCGAGGCGATGCGCTCGAAGA 197696 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTG-TTGGAGATGCCCACGTCGGGG 1254521 ||||||||| ||||||||||||| |||||| | | | ||| ||||||| ||||||| Sbjct 197697 TGTCGTTGATGAACGAGTTCATGATCGACAT-GCCGCGCTTGCTGATGCCCGTGTCGGGG 197755 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGAGGTGTAGTTTTTCTTGCGC 1254581 |||||||| ||||||||||||||| | | ||||||||| | | ||||||| | Sbjct 197756 TGCACCTGACGCAGCACCTTGTAGATGTAGGTCGAGTACGATTCGACGCGCTTCTTGCCC 197815 Query 1254582 TGGCCGCGGCCGCGCTTGCCGACCTTGGC 1254610 | ||| ||| ||||||| |||||| Sbjct 197816 TTGCCCTTGCC---CTTGCCGGTCTTGGC 197841 >seq824 Length=74719 Score = 123 bits (136), Expect = 3e-22 Identities = 244/355 (69%), Gaps = 12/355 (3%) Strand=Plus/Minus Query 1726689 GCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCGTTCT 1726748 ||| |||||| || |||||||| | ||| | || | ||| | |||||||||| Sbjct 36845 GCTTGGCGGCCACG---ACGGCGTCCACGGCCAGCTGCAGGTCGCCGCCCGTGCCGTTCT 36789 Query 1726749 TGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCG 1726808 |||||||||||| || | ||| |||| | ||||||||||| ||||| |||||| | Sbjct 36788 TGAAGCCGATGGGCATGGACAGCCCCGAGCAGAGCTCGCGGTGCAGCTGGCACTCGGTGG 36729 Query 1726809 TGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAA---GGGGCCACCAGAG 1726865 |||| ||||| | ||| ||||| ||| ||||| | | || | | ||| || | Sbjct 36728 TGCGGGCGCCGATGGCTCCCCAGCTCACGAGGTC--CGAGATGAACTGCGGCGACATGGT 36671 Query 1726866 GACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAACAGGC 1726925 | | ||| |||||| | || ||||| | ||| || || || || || ||| Sbjct 36670 GTC-GAGGAACTCGCAGCCCGCGGGCAGGCCGA--GC-TCGTTGATGGCGGCCAGCAGCT 36615 Query 1726926 GGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTGG 1726985 ||||| | | ||| || | | | | | | || ||||||||||| |||||| || Sbjct 36614 CGCGCGCCACGCGCAGCCCCTTGTTGATGTTGAAGGAGCCGTCGAGGTCCGGGTCGTTGA 36555 Query 1726986 CCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGAC 1727040 || |||||||| |||||||| ||||| ||||| |||| || |||||||||| Sbjct 36554 TGAGCCCCTTCCAGCCGACGGTGGTGCGGGGCTTCTCGAAGTACACGCGCATGAC 36500 >seq1068 Length=45886 Score = 116 bits (128), Expect = 5e-20 Identities = 188/270 (70%), Gaps = 3/270 (1%) Strand=Plus/Minus Query 1572388 GCCAAAGCCGCCGCTGCCGCGCTCGGTGTCGTCCAGCGAGTCGACCCACTCGGGCTCGGG 1572447 ||| ||||||||| ||| ||| | ||||| || | | ||| ||| || | ||| || Sbjct 20255 GCCGAAGCCGCCGGCGCCACGCGCCGTGTCCTCGATCTCGTCCACCTCCTGGATCTCCGG 20196 Query 1572448 TTGGGCAATCTTTTCGATGAGCAACTGGGCGATGCGCGCCTCGCCCTGGACAACGTGGTC 1572507 | | ||||| |||| || | ||| || | ||| | ||| || ||| | ||| Sbjct 20195 GTACTCGATCTTCTCGAGGATGAGCTGCGCCACGCGGTCTCCGCGCTTGACGGGGAAGTC 20136 Query 1572508 GGCGTCGGTGTGGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATGAC 1572567 || | | ||||||||| || | |||||||| | |||||| |||||||| ||||| || Sbjct 20135 CTCGGCCGCGTGGTTGAACAGGATCACGCCCACGTTGCCGCGGTAGTCGGCGTCGATCAC 20076 Query 1572568 GCCTGCGCCGACGTCGATGCCCCT---GACGGCCAGGGACGAGCGCGGCGCCACGCGCCC 1572624 ||| ||||| ||||||| | | || || || |||||||||||||||||| | Sbjct 20075 GCCGGCGCCCGTGTCGATGAACTTCTTGAGCGCGAGTCCGGAGCGCGGCGCCACGCGCGC 20016 Query 1572625 ATAGTAGCCCGCGGGTATGGCCACGGCCAG 1572654 ||| |||| |||||| ||| | | |||| Sbjct 20015 GTAGCAGCCGTCGGGTACGGCGATGACCAG 19986 >seq863 Length=211352 Score = 109 bits (120), Expect = 7e-18 Identities = 113/147 (77%), Gaps = 6/147 (4%) Strand=Plus/Plus Query 1592150 GACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAG 1592209 ||| |||||||| | |||||| ||| | ||||| || ||||||||| | || |||||| Sbjct 54693 GACATCGAGCAGGAGATCCTCTTCGAGCTCATCCTGGCGGCCAACTACATGGATATCAAG 54752 Query 1592210 CCTCTGCTCGATCTTGGGTGC---AAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCC 1592266 |||| || || | ||| ||| ||||||| |||||| ||||||||| ||||| Sbjct 54753 AGCTTGCTGGACCTGGCCTGCGCCAAG---GTGGCCAGCATGATTAAGGGCAAGACGCCC 54809 Query 1592267 GAGGAGATCCGCAAGACCTTTAACATC 1592293 ||||||||||| |||| ||||||||| Sbjct 54810 CAGGAGATCCGCGAGACGTTTAACATC 54836 >seq114 Length=130129 Score = 104 bits (114), Expect = 3e-16 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 ||||| ||| | ||||| |||||||||||| | ||||||||| | ||||| || || | Sbjct 19790 CTCTTCGAGCTCATCCTGGCCGCCAACTACATGGACATCAAGTCGCTGCTGGACCTGTCG 19849 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 |||| ||||| |||||||||||||||| ||||||||||||||||| || ||| Sbjct 19850 TGCACCAAGGTGGCGTGCATGATCAAGGGCAAGACGCCCGAGGAGATCCGCGCCACGTTT 19909 Query 1592288 AACATCA 1592294 ||||| Sbjct 19910 GGCATCA 19916 >seq1490 Length=26176 Score = 95.1 bits (104), Expect = 1e-13 Identities = 158/223 (71%), Gaps = 13/223 (6%) Strand=Plus/Minus Query 1178268 TGCACCGCGACCTCAA--GTCGTCCAACCTGCTCGTCGACGACAACTTCACAATCAAGGT 1178325 ||||||| ||||| || ||| |||| |||| || ||| | ||||||| |||||| | Sbjct 8868 TGCACCGAGACCTGAAAAGTC--CCAATTTGCTGGTGGACAAGAACTTCAACATCAAGTT 8811 Query 1178326 GGCCGACTTTGGCTTTGCCCGCATCCGCGAGGACAA--TGC-GACGATGACGCGG---TG 1178379 | | |||||||| | || || || ||| | | ||| ||| |||||| | || Sbjct 8810 GTCGGACTTTGGACTGGCTCGGGTCA---AGGCCCACGTGCAGACCATGACGGGAAACTG 8754 Query 1178380 CGGCACGCCGGCGTGGACGGCGCCCGAGGTCCTGCGCGGCGAGCGCTACTCGGAAAAGGC 1178439 |||||| | ||||| ||| || ||||| ||| || | || ||| | || ||||| Sbjct 8753 CGGCACCGTGCAGTGGATGGCCCCTGAGGTGCTGGGCAACCAGAAGTACACTGAGAAGGC 8694 Query 1178440 CGACGTCTACTCGTTTGGCGTCGTCATGTGGGAGATCATCACG 1178482 |||||| | ||||| || ||||||| ||||||||| ||||| Sbjct 8693 CGACGTTTTTTCGTTCGGAATCGTCATTTGGGAGATCGTCACG 8651 >seq1025 Length=50094 Score = 89.7 bits (98), Expect = 6e-12 Identities = 144/200 (72%), Gaps = 9/200 (5%) Strand=Plus/Minus Query 1850345 CACCGCGACCTCAAGTCGTCCAACCTGCTGGTGACCGACGA-CTACTCGGTCAAGGTGGC 1850403 ||||| |||||||||||| ||| |||| ||||||| || |||| || ||||||| Sbjct 35682 CACCGTGACCTCAAGTCGCTCAATGTGCTCCTGACCGAAGACCTAC-AGGCCAAGGTGAG 35624 Query 1850404 CGACTTTGGCTT--TGCGCGCATCAAGGAGGCCAACGCGACCATGAC--CCGGTG-CGGC 1850458 |||||| ||| | || | |||| | ||| |||||||| ||||| ||| Sbjct 35623 CGACTTCGGCCTCAGTCGTGAGACAAG--CTTCGACGAAACCATGACGAGCGGTGTAGGC 35566 Query 1850459 ACGCCCTGCTGGACGGCGCCCGAGGTTATTCGCGGCGCGCGCTACTCGGAAAAGGTCGAC 1850518 ||| |||||| ||||| || ||| | ||||| | | | |||||||| |||| |||| Sbjct 35565 ACGTTACTCTGGACAGCGCCGGAAGTTCTGCGCGGAGAGAGGTACTCGGAGAAGGCCGAC 35506 Query 1850519 GTCTACTCTTTCGGCGTCGT 1850538 |||| |||||||| ||||| Sbjct 35505 ATCTATTCTTTCGGTGTCGT 35486 >seq885 Length=208090 Score = 86.0 bits (94), Expect = 8e-11 Identities = 162/232 (70%), Gaps = 11/232 (5%) Strand=Plus/Minus Query 1347608 TCGTCCACCGCGACCTCAAGTCGCTCAACGTGCTCCTCGAC-GCCAAGTGGAACGCCAAG 1347666 || ||||||||||||||||||| |||||||| || |||||| ||| | | | |||||| Sbjct 50566 TCATCCACCGCGACCTCAAGTCTCTCAACGTCCTGCTCGACAGCCGACT-GCGTGCCAAG 50508 Query 1347667 ATCTCAGACTTTGGCCTCA--CG-CAGTGGTCGGCGCGCGCCCGCACGGCCGACGCCGTG 1347723 | ||||| || |||| || || | ||| || || | | | || ||| |||| Sbjct 50507 CTGAGCGACTTCGGGCTCAGTCGTGAGCGCTCGTCGGACGACACGATGACCAACGGCGTG 50448 Query 1347724 GGCACCGTGCACTGGTCGGCGCCCGAGGTGCTGTCGGCCGACGGCGACGCCAACCTCTTG 1347783 ||||| | | |||| ||||||||||| | ||| || |||||| ||| || Sbjct 50447 GGCACGCTACTCTGGACGGCGCCCGAGATCCTG-CG-----CGGCGAGGCCTACAGTGAA 50394 Query 1347784 CTGGCCGACGTCTACTCGTTTGGCATCGTCCTGTGGGAGGTGCTCACGCGCC 1347835 ||| ||||| ||||||| | |||||| |||| ||| || |||| ||| Sbjct 50393 AAGGCGGACGTGTACTCGTACGCCATCGTACTGTCCGAGTTGGACACGTGCC 50342 >seq568 Length=113097 Score = 86.0 bits (94), Expect = 8e-11 Identities = 166/239 (69%), Gaps = 12/239 (5%) Strand=Plus/Plus Query 1178244 TGCACGGGCGCGACCGGCCGATCGTGCACCGCGACCTCAAGTC---GTCCAACCTGCTCG 1178300 ||||| || ||||| |||| | ||||||||||||||||||| | || |||||| Sbjct 69270 TGCACTCGCTCGACCCGCCGGTGCTGCACCGCGACCTCAAGTCCAAGAACATCCTGCTGA 69329 Query 1178301 TCGACGACAACTTCACAATCAAGGTGGCCGACTTTGGCTTTGCCCGCATCCGCGAGGACA 1178360 | |||| || | | |||| | | ||||||||| | | || |||| |||| Sbjct 69330 CCTCCGAC--CTGGA-AGCCAAGCTCACGGACTTTGGCATCTCTCGAGAACGCGTCGACA 69386 Query 1178361 ATGCGACGATGACG--CGGTG-CGGCACGCCGGCGTGGACGGCGCCCGAGGTCCTGCGCG 1178417 | ||| |||||| || | ||||||| || |||| ||| |||||||| || | Sbjct 69387 A---GACCATGACGGCTGGCGTCGGCACGTCGCTTTGGATGGCTCCCGAGGTAATGATGG 69443 Query 1178418 GCGAGCGCTACTCGGAAAAGGCCGACGTCTACTCGTTTGGCGTCGTCATGTGGGAGATC 1178476 ||||| | ||| || ||||||||| ||| |||||| |||||||| | | |||| || Sbjct 69444 GCGAGAGGTACGACGACAAGGCCGACATCTTCTCGTTCGGCGTCGTGCTTTCGGAGCTC 69502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107006583472272