Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F000686205.3_202014-12- 01] 1,616 sequences; 73,680,304 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq147 113 1e-19 >seq147 Length=128699 Score = 113 bits (124), Expect = 1e-19 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || || || || || || ||||| || || ||||| || ||| Sbjct 64982 CAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTGGAGCCGTCCGAC 64923 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | ||| || || ||||| || || || |||||||| || || ||||| || |||||||| Sbjct 64922 AGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAG 64863 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || || | || || ||| || Sbjct 64862 CGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAACATC 64803 Query 178104 CAAAA 178108 || || Sbjct 64802 CAGAA 64798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203706276745504