Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq1703 89.7 6e-13 >seq1703 Length=12463 Score = 89.7 bits (98), Expect = 6e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 83255 CGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTCGCACTTCTCGAAGAGC 83314 || |||||| |||||||| || || | || |||||||||||| |||||| |||| Sbjct 3034 CGCAGGAAGTTGAAGAGCGCGTGCGCGTTGGCGCCGTTGACCTCGACCTTCTCCGTGAGC 2975 Query 83315 ATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCG 83374 ||| |||||||||||| || || || |||| |||| ||| | |||||||| Sbjct 2974 TGGAAGGCCGGCTCGAAGCCCTTGCCGGGGCGGATGTGCCGCAGACTCTGGTAGATCTCG 2915 Query 83375 GCATTCTGGGCGTTTTCCTGGTGACCGAACTGGTTACACGGG 83416 | | | ||| |||||||| ||||||||||| |||||| Sbjct 2914 TCGCCGTTGAGGTTCTCCTGGTGGCCGAACTGGTTGCACGGG 2873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608731780501760