Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq6666 401 6e-107 seq92 372 3e-98 seq570 172 6e-38 seq132 145 8e-30 seq884 136 4e-27 seq1033 107 2e-18 >seq6666 Length=2405 Score = 401 bits (444), Expect = 6e-107 Identities = 613/862 (71%), Gaps = 16/862 (2%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||| | ||| ||||||||| |||||||||| | ||||| || || | | ||| Sbjct 2325 GAGCCGTTCCTGGTCGAGAACCCGAACCGGTTCGTGCTGTTCCCGATCCAGGAGCACGAC 2266 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 |||||| |||||||| ||||| |||||||| |||||||| | ||||||| |||||||| Sbjct 2265 GTGTGGCAGATGTACAAGAAGGCGGAGGCGTCATTCTGGACGGCCGAGGAGCTGGACCTG 2206 Query 116696 -TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 | || | | | || ||||||| | | ||| ||||||||||| ||||||||||| Sbjct 2205 GTGCACGACCTCAAG-GACTGGGCGAACCTGACGGACAACGAGCGGTTCTTCATCAAGCA 2147 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814 |||||||||||| ||||| ||||||||||||||||| |||||||| |||| | | || Sbjct 2146 CGTGCTGGCCTTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCCATGAACTT 2087 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | | || ||||||||| | ||||| || ||||||||||| || ||||||||||| || Sbjct 2086 CAGCAATGAAGTGCAGGTGCCGGAGGCCCGCTGCTTCTACGGTTTCCAGATCGCCATCGA 2027 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGA 116934 |||| | ||||| || |||||||| ||||| ||||||||| | | || ||| Sbjct 2026 GAACATCCACTCAGAGGTGTATTCGCTGCTCATTGACACGTACATCAAGGATGCGACGGA 1967 Query 116935 GAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTG 116994 |||| || || || |||||||| ||||| ||||| || || |||| || | || Sbjct 1966 GAAGGACCACCTGCTGCGTGCCATCGATACGATCCCGTGTGTGAAGAAGAAAGCGCACTG 1907 Query 116995 GGCGCTGCGCTGGATCG-CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCG 117053 |||||| ||| || || || ||| | | | | | ||||| ||| |||| |||| Sbjct 1906 GGCGCTCAAGTGGTGCGACCCGC-GAGTGTCGTCGTACCCGGAGCGTCTGCTGGCGTTCG 1848 Query 117054 CGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAAC 117113 | || || |||||| ||||||| |||||| ||| | |||| || ||||||||||| | Sbjct 1847 CAGCTGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCCATCTTCTGGCTCAAGAAGC 1788 Query 117114 GCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGC 117173 ||||||||||||| ||||||| ||| |||||||| ||| | | |||||||| ||| Sbjct 1787 GCGGCCTCATGCCTGGCCTGAGCTTCTCGAACGAGCTGATCAGCCGTGACGAGGGCATGC 1728 Query 117174 ATTGCGACTTTGCCTGTTTGCTG---TTCAAGCATTTGGTG---CAGCGACCGAGCGCGG 117227 | ||||| || || | || | ||||| ||||| ||| ||| | | | Sbjct 1727 ACACGGACTTCGCGTGCCTCATGTACTCCAAGC---TGGTGAACAAGCTGCCG-GAGAGC 1672 Query 117228 CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAG 117287 |||| | || |||||||| ||||||||| | |||||||| ||| | || Sbjct 1671 CGCGTG-CA-CGAGATCGTGCGCGACGCGGTGACGATCGAGCACGAGTTCGTGCGTGACT 1614 Query 117288 CGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCG 117347 |||| || ||| ||| | || | || | | |||| || ||||||||||||| Sbjct 1613 CGCTCCCTGTGGAGCTGATCGGCATGAACTCGGGGCTCATGTGCCAGTACATCGAGTTCG 1554 Query 117348 TCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGC 117407 | |||||| | |||||| | ||||| | | ||| ||||||| |||||| Sbjct 1553 TGGCCGACCGTCTGCTGTACTCGCTGGGTGTGTCGAAGATCTACAACGTAAAGAACCCGT 1494 Query 117408 TGGACTTTATGAACCTCATCTC 117429 | |||| ||| || | ||||| Sbjct 1493 TCGACTGGATGGACATGATCTC 1472 >seq92 Length=63871 Score = 372 bits (412), Expect = 3e-98 Identities = 585/828 (71%), Gaps = 12/828 (1%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||| | ||| ||||||||| |||||||||| | ||||| || || | | ||| Sbjct 48941 GAGCCGTTCCTGGTCGAGAACCCGAACCGGTTCGTGCTGTTCCCGATCCAGGAGCACGAC 49000 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 |||||| |||||||| || || ||||| ||||||||||| | ||||||| |||||||| Sbjct 49001 GTGTGGCAGATGTACAAGAAAGCGGAGGCCTCGTTCTGGACGGCCGAGGAGCTGGACCTG 49060 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 | ||| || ||||||| | | ||| ||||||||||| |||||||||||| Sbjct 49061 GTGCACGACCTGAAGGACTGGGCGAACCTGACGGACAACGAGCGGTTCTTCATCAAGCAC 49120 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 ||||||||||| ||||| ||||||||||||||||| |||||||| |||| | | ||| Sbjct 49121 GTGCTGGCCTTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCCATGAACTTC 49180 Query 116816 GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAG 116875 | || ||||||||| | ||||| || ||||||||||| || ||||||||||| ||| Sbjct 49181 AGCAATGAAGTGCAGGTGCCGGAGGCCCGCTGCTTCTACGGTTTCCAGATCGCCATCGAG 49240 Query 116876 AACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAG 116935 ||| | ||||| || |||||||| ||||| ||||||||| | | || |||| Sbjct 49241 AACATCCACTCAGAGGTGTATTCGCTGCTCATTGACACGTACATCAAGGATGCGACGGAG 49300 Query 116936 AAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGG 116995 ||| || || || |||||||| ||||| ||||| || || |||| || | ||| Sbjct 49301 AAGGACCACCTGCTGCGTGCCATCGATACGATCCCGTGTGTGAAGAAGAAAGCGCACTGG 49360 Query 116996 GCGCTGCGCTGGATCG-CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGC 117054 ||||| ||| || || || ||| | | | | | |||||| || || | ||||| Sbjct 49361 GCGCTCAAGTGGTGCGACCCGC-GAGTGTCGTCGTACCCGGAGCGCGTGCTGACGTTCGC 49419 Query 117055 GGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACG 117114 |||| |||||| ||||||| |||||| ||| | | || || ||||||||||| || Sbjct 49420 AACCGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGATCTTCTGGCTCAAGAAGCG 49479 Query 117115 CGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCA 117174 |||||||| ||| ||||||| ||| |||||||| ||| | | |||||||| |||| Sbjct 49480 CGGCCTCACGCCTGGCCTGAGCTTCTCGAACGAGCTGATCAGCCGTGACGAGGGCATGCA 49539 Query 117175 TTGCGACTTTGCCTGTTTGCTG---TTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG-C 117230 ||||| || | | || | ||||| ||||| | | | | || || | | Sbjct 49540 CACGGACTTCGCGAGCCTCATGTACTCCAAGC---TGGTG-AACAAGCTGCCGGGGAGCC 49595 Query 117231 GCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGC 117290 |||| |||||||| ||||| ||| | |||||||| ||| | || ||| Sbjct 49596 GCGTGCACGAGATCGTGCGCGACGGGGTGACGATCGAGCACGAGTTCGTGCGTGACTCGC 49655 Query 117291 TGCCGGT-GCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTC 117349 | || || | ||| | | || | || | | |||| ||||||||||||||||| Sbjct 49656 TCCCTGTGGAGTC-GATCGGCATGAACTCGGCGCTCATGTGCCAATACATCGAGTTCGTG 49714 Query 117350 GCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACG 117397 |||||| | |||||| | ||||| | | ||| ||||||| || Sbjct 49715 GCCGACCGTCTGCTGTGCTCGCTGGGTGTGTCGAAGATCTACAACGCG 49762 >seq570 Length=29657 Score = 172 bits (190), Expect = 6e-38 Identities = 179/232 (77%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || |||||| || ||||| || ||||| |||||||| |||||||| ||||||| || | Sbjct 28593 AACAATGCAGATTTTCGTCAAGACGCTGACGGGCAAGACCATCACACTCGACGTGGAGCC 28652 Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | ||| | | |||| | ||| | || |||| ||||| ||||||||||| | | Sbjct 28653 GTCGGACTCGATCGACAACG-TGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCG 28711 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 ||||||| || ||||||| ||| ||||| |||||||| |||| ||||| || | ||||| Sbjct 28712 ACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACT 28771 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||||||| | |||||||| || ||| |||| || | ||||| Sbjct 28772 ACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 28823 Score = 172 bits (190), Expect = 6e-38 Identities = 177/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || ||||| |||||||| |||||||| ||||||| || | | Sbjct 28824 AATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACCATCACGCTCGACGTGGAGCCGTC 28883 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||| | | |||| | ||| | || |||| ||||| ||||||||||| | |||| Sbjct 28884 GGACTCGATCGACAACG-TGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACC 28942 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || ||||||| ||| ||||| |||||||| |||| ||||| || | |||||||| Sbjct 28943 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACA 29002 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||||| | |||||||| || ||| |||| || | ||||| Sbjct 29003 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 29051 Score = 172 bits (190), Expect = 6e-38 Identities = 177/229 (77%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || ||||| |||||||| |||||||| ||||||| || | | Sbjct 29052 AATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACCATCACGCTCGACGTGGAGCCGTC 29111 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||| | | |||| | ||| | || |||| ||||| ||||||||||| | |||| Sbjct 29112 GGACTCGATCGACAACG-TGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACC 29170 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || ||||||| ||| ||||| |||||||| |||| ||||| || | |||||||| Sbjct 29171 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACA 29230 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||||| | |||||||| || ||| |||| || | ||||| Sbjct 29231 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 29279 Score = 168 bits (186), Expect = 7e-37 Identities = 169/217 (78%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || ||||| |||||||| |||||||| ||||||| || | | Sbjct 29280 AATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACCATCACGCTCGACGTGGAGCCGTC 29339 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 ||| | | |||| | ||| | || |||| ||||| ||||||||||| | |||| Sbjct 29340 GGACTCGATCGACAACG-TGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACC 29398 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || ||||||| ||| ||||| |||||||| |||| ||||| || | |||||||| Sbjct 29399 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACA 29458 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||||| | |||||||| || ||| |||| Sbjct 29459 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCG 29495 >seq132 Length=78195 Score = 145 bits (160), Expect = 8e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| |||||||| || ||||| | ||||| || | | Sbjct 54331 ATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 54390 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | |||| ||||| | || || | ||||| ||||||||||| | ||||| Sbjct 54391 GACTCGATCGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCA 54449 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| ||||| || |||| ||||| || | ||||||||| Sbjct 54450 GCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGCGACTACAA 54509 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||| ||||||||| | |||||||| || ||| |||| || | || ||| Sbjct 54510 CATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGCGGTGGC 54558 Score = 141 bits (156), Expect = 1e-28 Identities = 163/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || ||||| |||||||| || ||||| | ||||| || | | Sbjct 55015 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 55074 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | |||| ||||| | || || | ||||| ||||||||||| | ||||| Sbjct 55075 GACTCGATCGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCA 55133 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| ||||| || |||| ||||| || | ||||||||| Sbjct 55134 GCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGCGACTACAA 55193 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 ||| ||||||||| | |||||||| || ||| ||||| Sbjct 55194 CATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGC 55230 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || ||||| |||||||| || ||||| | ||||| || | | Sbjct 54559 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 54618 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | |||| ||||| | || || | ||||| ||||||||||| | ||||| Sbjct 54619 GACTCGATCGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCA 54677 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| ||||| || |||| ||||| || | ||||||||| Sbjct 54678 GCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGCGACTACAA 54737 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||| ||||||||| | |||||||| || ||| |||| || | || ||| Sbjct 54738 CATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGCGGTGGC 54786 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || ||||| |||||||| || ||||| | ||||| || | | Sbjct 54787 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 54846 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | |||| ||||| | || || | ||||| ||||||||||| | ||||| Sbjct 54847 GACTCGATCGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCA 54905 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| ||||| || |||| ||||| || | ||||||||| Sbjct 54906 GCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGCGACTACAA 54965 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||| ||||||||| | |||||||| || ||| |||| || | || ||| Sbjct 54966 CATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGCGGTGGC 55014 >seq884 Length=21595 Score = 136 bits (150), Expect = 4e-27 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || |||||||| |||||||| | ||||| || | || Sbjct 4983 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTGGAGCCGTCC 4924 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||||| | | | ||||| | ||||| | ||||| ||||||||||| | |||||| Sbjct 4923 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 4864 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || |||| ||||| ||| ||||||||| Sbjct 4863 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAAC 4804 Query 40870 ATCCAGAAGG 40879 |||||||||| Sbjct 4803 ATCCAGAAGG 4794 >seq1033 Length=19618 Score = 107 bits (118), Expect = 2e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 || |||||| | |||||||| || || |||| ||| ||||| |||||||| |||| ||| Sbjct 11563 GGAATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGC 11504 Query 40852 ACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGG 40911 ||||| ||||||||||||||||||||| ||||||||| || ||| | || || | Sbjct 11503 ACCCTTTCGGACTACAACATCCAGAAGGAGAGCACGCTGCACCTGGTGCTTCGTCTGCGT 11444 Query 40912 GGCGGCGGC 40920 || || ||| Sbjct 11443 GGTGGTGGC 11435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515164174589440