Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq1005 95.1 1e-14 >seq1005 Length=19703 Score = 95.1 bits (104), Expect = 1e-14 Identities = 176/257 (68%), Gaps = 6/257 (2%) Strand=Plus/Minus Query 15398 ATATTTATGGGACCGACGTACTATCACCGACTCAAACACATGGTAAAGGACAAGATGCAC 15457 || || || ||||| |||| ||| || || || || || ||||| | |||||||| ||| Sbjct 16251 ATCTTCATCGGACCCACGTTCTACCAGCGCCTGAAGCATATGGTCGACGACAAGATCCAC 16192 Query 15458 GCGCGATCGCACGGACAGGTGACGACGCTCCATCGCCAGCCCAACTGCGGTCGATCGCAA 15517 |||| |||| || | ||||| | ||| |||||||||| ||||| | | Sbjct 16191 TCGCGCTCGCGTGGTCCCGTGACCATGCTGACGCGCCAGCCCATGGAGGGTCGTGCTCGC 16132 Query 15518 GGCGGTGGCCTCCGCTTTGGAGAGATGGAAAAGGACTGCATTCTGGT---GCACGGCGCC 15574 | |||||||| || | ||||||||||| || || |||||| ||||||| | Sbjct 16131 GAAGGTGGCCTGCGTATGGGAGAGATGGAGCGCGATTG---TCTGGTCTCGCACGGCTCG 16075 Query 15575 ACCCAATTCCTCAACGAGCGCATGTTTCTCAACAGTGACCCGTTCCAGATTGACGTGTGC 15634 || | ||||||| || ||| |||| |||| ||| ||| || | |||||||| Sbjct 16074 GCCAACTTCCTCATGGACCGCCTGTTCGCCAACTCGGACGCGTACCGTGTCCACGTGTGC 16015 Query 15635 AAAGACTGCGGCATGAT 15651 | | ||||||||| || Sbjct 16014 GATGTCTGCGGCATCAT 15998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611326703334400