Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq6666 194 3e-44 seq1274 188 1e-42 seq326 188 1e-42 seq92 176 8e-39 seq570 161 2e-34 seq1719 113 8e-20 seq210 102 2e-16 seq347 86.0 1e-11 >seq6666 Length=2405 Score = 194 bits (214), Expect = 3e-44 Identities = 587/889 (66%), Gaps = 26/889 (3%) Strand=Plus/Plus Query 9939 ACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGG 9998 || |||||||| |||||| || || |||||| ||||| | |||||||| || Sbjct 1412 ACACCCGCCTTGGAGTACTCGCCCACGCGCTTCTCGAAAAAGTTCGTCTTGCCCTGCAGC 1471 Query 9999 GAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGT 10058 || || | ||||| |||| || ||||||| || | ||| | ||| || Sbjct 1472 GAGATCATGTCCATCCAGTCGAACGGGTTCTTTACGTTGTAGATCTTCGACACACCCAGC 1531 Query 10059 GCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATG 10118 | | | ||||| |||||||||||||||||||||| ||| || ||||||||||| Sbjct 1532 GAGTACAGCAGACGGTCGGCCACGAACTCGATGTACTGGCACATGAGCCCCGAGTTCATG 1591 Query 10119 CCAATCATGCGGCAG-GGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTC 10177 || |||| || || |||| | ||| | | ||| || | ||| | | ||||| || Sbjct 1592 CCGATCA-GCTCCACAGGGAGCGAGTCACGCACGAACTCGTGCTCGATCGTCACCGCGTC 1650 Query 10178 CTCGACGATGCTCTTTACCACG--TCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGG 10235 ||||| ||| | | || || || |||||||||| | ||||| || |||| | Sbjct 1651 GCGCACGAT-CTCGTGCACGCGGCTCTCCGG-CAGCTTGTTCACCAGCTTGGAGTACATG 1708 Query 10236 AGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCC 10295 || | || | | ||| | ||||||||| |||||||| | |||||| || || | | Sbjct 1709 AGGCACGCGAAGTCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTC 1768 Query 10296 AGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAAC 10355 || || |||||||| || || || |||||||| |||| ||||||||| || ||||| Sbjct 1769 AGGCCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAACGAGCCCGAGAA- 1827 Query 10356 AGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAG--CGGTCGCG 10411 ||||| |||||||| | | || | || ||||| | | | || | ||||| Sbjct 1828 -GAAGATGCCCTCCACAGCTGCGAACGCCAGCAGACGCTCCGGGTACGACGACACTCGCG 1886 Query 10412 CGAAA-AGTATTTCGAG-GCCCA---CGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCG 10466 | | | || ||| ||||| |||| |||||| ||| |||||||| ||| Sbjct 1887 GGTCGCACCACTT-GAGCGCCCAGTGCGCTTTCTTCTT---CACACACGGGATCGTATCG 1942 Query 10467 ATAGCCTCGAAG-AGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAG 10525 || || || || || | || ||| ||| | |||| || | |||| |||||| Sbjct 1943 ATGGCA-CGCAGCAGGTGGTCCTTCTCCGTCGCATCCTTGATGTACGTGTCAATGAGCAG 2001 Query 10526 GGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGC 10585 || || ||| ||||| | |||| || |||| || ||||||| || || Sbjct 2002 CGAATACACCTCTGAGTGGATGTTCTCGATGGCGATCTGGAAACCGTAGAAGCAGCGGGC 2061 Query 10586 CGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATC 10645 | || || ||||| | | ||||| || ||||||||| |||| ||||| || Sbjct 2062 CTCCGGCACCTGCACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTC 2121 Query 10646 GCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTT 10705 |||| | || |||||| | || | ||||||||||||| ||||| | || |||| || Sbjct 2122 GCTGGCAGCGAAGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAGGTT 2181 Query 10706 TTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGC 10765 | |||||| | || || || | | |||||| | |||||||| | || Sbjct 2182 CGC---CCAGTCCTTGAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAATGACGC 2238 Query 10766 AACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAAC 10814 | ||||||||||||||||| | | |||| | | | |||| |||||| Sbjct 2239 CTCCGCCTTCTTGTACATCTGCCACACGTCGTGCTCCTGGATCGGGAAC 2287 >seq1274 Length=16964 Score = 188 bits (208), Expect = 1e-42 Identities = 404/591 (68%), Gaps = 16/591 (3%) Strand=Plus/Minus Query 268211 CCAGTTGCAATCACAAAGTCCTCTGGCTCAGGAGACTGGAGCATTTTCCACATTGCTTCG 268270 ||||| |||| ||||| || || || | | || |||||| |||||| || Sbjct 1160 CCAGTAGCAACAACAAAATCATCCGGAGTATCATGTTGAAGCATTCGCCACATGCACTCC 1101 Query 268271 ACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCAT 268330 || ||||| || || |||||||| || || || ||||| | |||||| | || ||||| Sbjct 1100 ACGTAGTCGCGAGCGTGGCCCCAGTCTCGTTTCGCGTCGAGGTTCCCCACAAAGAGGCAC 1041 Query 268331 TTCTGCTTGCCGAGCTTCACG----CGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAA 268386 |||| | || ||| ||| || ||| | | || ||||| || || || ||||| Sbjct 1040 TTCTCAATACC-AGC---ACGAATACGCACAACAGCTCGGGTGATCTTGCGAGTGACGAA 985 Query 268387 CGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCAC-GCGAACATGC 268445 || |||||| | ||||| ||||||||||| | || ||||| ||| || |||||| Sbjct 984 GGTTGGTCCACGTCGGGGGCTTTCGTGGTTGAATAAAATCCCGTT-CACGGCAAACATGG 926 Query 268446 CATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACG 268505 | || || || || | ||||||||| |||| | || ||| ||| || || |||| | Sbjct 925 CGTAGGCTTCGCGATGGTTCACGACACTCCAAAAAGCGAACTGCTTCGCGACACCGTAGG 866 Query 268506 GAGAACGTGGATGGAAGGGCGTCGTGATC-TTTTGAGGGATTTCTCGGACTTTGCCAAAG 268564 | || || |||||||| || ||| | || | || || | |||| || ||||| | Sbjct 865 GTGATCGCGGATGGAACGGAGTC-TCCTCGTCCTGCGGTGTGGCTCGCACCTTGCCGTAC 807 Query 268565 AGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATTCGGATT 268624 | || |||||||||||||||||| || | | ||| || || ||| | || | Sbjct 806 AATTCACTCGTCGATGCTTGGTAGAACCGCGTCGAGTGTTCCAGTCCACAGGTGCGCA-A 748 Query 268625 GCCT-CGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTC 268683 || | ||||| || || | |||| ||||| || |||||||| ||||| | || || Sbjct 747 GCATGTGAGCAGGCGGAGTGCACCCACTCCATCGACATCCGCTGTGTACTCGGCCAGTTC 688 Query 268684 GAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTG 268743 ||| || |||| ||||||| | || |||||||| || || |||| ||| || | Sbjct 687 GAAGGAGACCTTGACATGGGACATCGCCCCCAGGTTGTACACTTCATTCGGGCGTACGCG 628 Query 268744 CTGCACGATCT-TCACGAGGTTCGTTGAGTCGGTGAGGTCTCCGTAGTGCA 268793 ||| |||| ||| | |||| | ||||||||| || |||||||||| Sbjct 627 TGCCACAATCTGACAC-AAATTCGACGCGTCGGTGAGATCCCCGTAGTGCA 578 >seq326 Length=38572 Score = 188 bits (208), Expect = 1e-42 Identities = 660/1017 (65%), Gaps = 29/1017 (3%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||||||||| ||| ||| ||||| |||||| ||||||||||| Sbjct 25868 CGCCACTGGATGTACTGGTTGGCCGTCTCGTCGAGGTGCGACTCAATGTGGTGGAAAGCG 25809 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| || ||||| || | |||||| || ||||||||||| || | ||||| Sbjct 25808 TGCTGAGCCACGTAGGCGAAACGCATGGAAGGGTGCTTCCACACCTGACCGCTCGTCGGC 25749 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 | |||| || || || | |||||| ||||| | ||| || ||||| |||||||||| | Sbjct 25748 TCCACCTCACCCGTCAGCATCTTGATCAGCGTCGACTTACCGGCACCGTTGGGGCCAAGC 25689 Query 225161 ACGCCAATCCGGGATGACATTGC-AAC--CTGCGAGTTCACGTTGCT-GAAGATCTCAGG 225216 || | || ||| |||| || || | |||| | |||| | || | || || Sbjct 25688 ACAGCGATACGGCTCGACAGAGCGCACGTCACCGAGATGTTGTTGATCGACGGCTTCGGG 25629 Query 225217 G--CCAGTTTGGTA-AGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTGGA 225273 | |||| |||| | | | || | ||| ||||||| ||||| Sbjct 25628 GTACCAG---GGTACTGGTACGAGCA-GTTGGTCAGACGAATGATGGGCTTACCCTTGTT 25573 Query 225274 AGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC---CTT 225330 | || | | ||||| || ||||| |||||| ||| |||| ||| || Sbjct 25572 CTTGATGTCAGCAAGGAAACCAGGCTCCGGGAACGTGAACT---TCACGTTGTCCGACTC 25516 Query 225331 CAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAG 225390 ||| |||||||| | |||||||| || | ||||| ||| ||||| || Sbjct 25515 CAGCTCGTAGTAGGCCTTGGCCTCGGGCTTCTGCTCAACGAAGAGAGAAAGGTTGCCCTT 25456 Query 225391 GTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAG 225450 || || | ||||| || ||||||| || | || | ||||| |||||| Sbjct 25455 GTAGATCTTCAGCTTACGG---GTCTCGTAGTGGATGATGTTGGTACACACGTTGTCAAG 25399 Query 225451 GAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGT 225510 ||||||||||||||||||||| |||||||| | || ||| || || | | |||| | Sbjct 25398 GAAGCCAGAGTCGTGGGACACCATGATGGAGGTGACAGTCGGCACGCTCGTCAGGTAGTT 25339 Query 225511 GATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGAT 225570 ||||| || ||||| |||| |||| ||||||||| || || || || ||||| || Sbjct 25338 CTCAAGCCAGGCGACGTTCTTGACATCCAAGTGGTTTGTCGGCTCATCAAGCAGCAGAAT 25279 Query 225571 GTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAG 225630 |||||| | | || || || |||| || || ||||| ||||| || || || || Sbjct 25278 GTCAGCCTTCAGCAGCATAGCACGCGACAGCTCGAGTTTCATCTTCCAACCACCAGAAAG 25219 Query 225631 GGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAG---GAGCGTCTG 225687 |||||| | | || ||| | | || |||||| || ||| ||||||| Sbjct 25218 GGAGCCCACAGCCTGAGCCTGCATCTCGGCGGTGAAGCCG-ACATCAGCCAGAGCGTC-- 25162 Query 225688 GATAATGCGCTCGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAGAGGTAATCATA 225747 || || | ||| | || | | || | || | || | | ||| Sbjct 25161 CTCAACCTCCTTGCGAGGGGTG---TCCTTCAGGTCGTCATCAATCAGGATGAAGTCAAC 25105 Query 225748 TACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGCTG 225807 || || | || | | || || | | || ||| || ||| |||| ||| |||| Sbjct 25104 CACCGTAAGCTCAGCCTCCGAAGCCTGCAGGTTGTGCTCGACGAACACAGTCTTCAGCTC 25045 Query 225808 AGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTACTCTT 225867 |||||||||||| |||||||| || ||||| || || | ||| || ||| Sbjct 25044 GTCCTTGCTGGGGAAGCCCTCGAGCTGGCCGTTGGCAATGGCGCGCATCAGCGTCGACTT 24985 Query 225868 GCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGCGCGT 225927 || |||||||||||| || |||||| | | || ||||||| | || || | Sbjct 24984 ACCACAACCGTTGGGACCGCACAGACCGTAACGGTGGCCACGCTTGAGGCGAAGACGGGC 24925 Query 225928 GGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGTC 225984 | |||||| || ||| | ||||| || || || ||||||||||| | ||| ||||| Sbjct 24924 GTTGTTCAGCAGAATCATACCACCGTAAGCGAGCGAGAACTCGCAGTTGCAAAGGTC 24868 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 224449 GTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAAG 224508 ||||| ||| | || ||||| ||| ||| || | ||| || | ||| || ||||| Sbjct 26412 GTGAGTAATCATGACCACACCACCGTTGAAGTCCTTGATGGCCGAAGCAAGGGCACCAAG 26353 Query 224509 CGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCCA 224568 ||| |||||||||||| |||||||||||||||| || | | | ||| ||| | |||| Sbjct 26352 CGAGTCGCGGTCAAGGTAGTTCGTCGGCTCATCAAGCACAAGGATGTGCGGGTTCAGCCA 26293 Query 224569 CAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCGA 224628 || || ||| | | ||| | ||||||||||||||| || || || || || || ||||| Sbjct 26292 CATAGCGGCAGCGAGCACGACCTTCACCTTCTGACCACCGGACAGACCACGCATGCGCGA 26233 Query 224629 GTGAGTCGTGAATTCGG 224645 ||| || ||| |||| Sbjct 26232 GTGGGTACCGAACTCGG 26216 >seq92 Length=63871 Score = 176 bits (194), Expect = 8e-39 Identities = 506/758 (67%), Gaps = 28/758 (4%) Strand=Plus/Minus Query 10071 CGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATGCCAATC-ATGCG 10129 ||||| ||||||||||||||||| |||| ||| || ||||||||||||| ||| | | Sbjct 49722 CGGTCGGCCACGAACTCGATGTATTGGCACATGAGCGCCGAGTTCATGCCGATCGACTCC 49663 Query 10130 GCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGACGATGCT 10189 ||||| | | ||| | | ||| || | ||| | | ||| | || ||||| || Sbjct 49662 ACAGGG-AGCGAGTCACGCACGAACTCGTGCTCGATCGTCACCCCGTCGCGCACGAT-CT 49605 Query 10190 CTTTACCACG--TCAAGGGACAGCTTGTTCTCGAGCTTCGAATACAGGAGCTCTC-CAAA 10246 | | | || || || |||||||||| | ||||| || |||| ||| ||| | || Sbjct 49604 CGTGCACGCGGCTCCCCGG-CAGCTTGTTCACCAGCTTGGAGTACATGAGG-CTCGCGAA 49547 Query 10247 CTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCAT 10306 | | ||| | ||||||||| |||||||| | |||||| || || | ||| || ||| | Sbjct 49546 GTCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCAGGCGT 49487 Query 10307 GAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGA--CCC 10364 ||| || || || |||||||| || | ||||||||| || ||||| ||||| ||| Sbjct 49486 GAGGCCGCGCTTCTTGAGCCAGAAGATCGAGCAGAACGAGCCCGAGAA--GAAGATGCCC 49429 Query 10365 TCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAG--CGGTCGCGCGAAA-AGTAT 10421 |||||| | | | | | |||||| | | | || | ||||| | | | Sbjct 49428 TCCACGGTTGCGAACGTCAGCACGCGCTCCGGGTACGACGACACTCGCGGGTCGCACCAC 49369 Query 10422 TTCGAG-GCCCA---CGCTGCCTTCTTTCCCACGGCAGGGATCGTCTCGATAGCCTCGAA 10477 || ||| ||||| |||| |||||| ||| |||||||| ||||| || || | Sbjct 49368 TT-GAGCGCCCAGTGCGCTTTCTTCTT---CACACACGGGATCGTATCGATGGCA-CGCA 49314 Query 10478 G-AGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAGGGAGTATTGCT 10536 | || | || ||| ||| | |||| || | |||| |||||| || || || Sbjct 49313 GCAGGTGGTCCTTCTCCGTCGCATCCTTGATGTACGTGTCAATGAGCAGCGAATACACCT 49254 Query 10537 CGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGCCGAGGGGTCCG 10596 | ||||| | |||| || |||| || ||||||| || ||| || || Sbjct 49253 CTGAGTGGATGTTCTCGATGGCGATCTGGAAACCGTAGAAGCAGCGGGCCTCCGGCACCT 49194 Query 10597 TGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATCGCTGCCTGCAA 10656 ||||| | | ||||| || ||||||||| |||| ||||| |||||| | || | Sbjct 49193 GCACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGA 49134 Query 10657 AGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTTTTCACGCCAGT 10716 ||||| | || | ||||||||||||| ||||| | || |||| || | ||||| Sbjct 49133 AGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAGGTTCGC---CCAGT 49077 Query 10717 CTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCT 10776 | || || || || | | |||||| | |||||||| | ||| | || |||| Sbjct 49076 CCTTCAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAACGAGGCCTCCGCTTTCT 49017 Query 10777 TGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAAC 10814 |||||||||| | | |||| | | | |||| |||||| Sbjct 49016 TGTACATCTGCCACACGTCGTGCTCCTGGATCGGGAAC 48979 >seq570 Length=29657 Score = 161 bits (178), Expect = 2e-34 Identities = 179/239 (75%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 68224 GATTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGT 68283 || |||| ||||| || || || |||| |||| ||| ||||| ||||| || ||||||| Sbjct 29518 GACTTTAGTTTCCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGT 29459 Query 68284 TATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTT 68343 | || ||| || || | || || || | |||||| |||||||| ||||| | || | Sbjct 29458 TGTAGTCGCTCAGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCT 29399 Query 68344 GGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTG 68403 ||||||| || ||||| |||||||| |||||||| ||| ||| ||||| | ||| | Sbjct 29398 GGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTGTCGATCGAGTCCG 29339 Query 68404 CTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 | || || || | |||||||| || ||||| || ||||||||||| ||||||||| Sbjct 29338 ACGGCTCCACGTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCATT 29280 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || || |||| |||| ||| ||||| ||||| || |||||||| || ||| Sbjct 28825 TTCCGCCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGC 28766 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 || || | || || || | |||||| |||||||| ||||| | || |||||||| | Sbjct 28765 TCAGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCG 28706 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | ||||| |||||||| |||||||| ||| ||| ||||| | ||| | | || | Sbjct 28705 GGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTGTCGATCGAGTCCGACGGCTCCA 28646 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 | || | |||||||| || ||||| || ||||||||||| ||||||||| Sbjct 28645 CGTCGAGTGTGATGGTCTTGCCCGTCAGCGTCTTGACGAAAATCTGCATT 28596 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || || |||| |||| ||| ||||| ||||| || |||||||| || ||| Sbjct 29053 TTCCGCCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGC 28994 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 || || | || || || | |||||| |||||||| ||||| | || |||||||| | Sbjct 28993 TCAGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCG 28934 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | ||||| |||||||| |||||||| ||| ||| ||||| | ||| | | || | Sbjct 28933 GGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTGTCGATCGAGTCCGACGGCTCCA 28874 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 | || | |||||||| || ||||| || ||||||||||| ||||||||| Sbjct 28873 CGTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCATT 28824 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || || |||| |||| ||| ||||| ||||| || |||||||| || ||| Sbjct 29281 TTCCGCCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGC 29222 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 || || | || || || | |||||| |||||||| ||||| | || |||||||| | Sbjct 29221 TCAGCGTGCGACCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCG 29162 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | ||||| |||||||| |||||||| ||| ||| ||||| | ||| | | || | Sbjct 29161 GGATGCCCTCCTTGTCCTGAATCTTCTGCTTCACGTTGTCGATCGAGTCCGACGGCTCCA 29102 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 | || | |||||||| || ||||| || ||||||||||| ||||||||| Sbjct 29101 CGTCGAGCGTGATGGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCATT 29052 >seq1719 Length=11958 Score = 113 bits (124), Expect = 8e-20 Identities = 265/397 (67%), Gaps = 16/397 (4%) Strand=Plus/Plus Query 173082 ACGTCCTGAAGCAGGAAAAAATTGACACGATTATGCACTTTGCTGCGCAGACCCATGTGG 173141 ||||||| ||| ||| || ||||| || |||||||| ||||||||| | || |||| Sbjct 10964 ACGTCCTCAAGACGGAGCGCATCGACACCATCATGCACTTCGCTGCGCAGTCGCACGTGG 11023 Query 173142 ACAACTCGTTCGGTAACTCGCTGGCATTTACCATGAACAACGTCTACGGGACCCACGTTC 173201 ||||||||||||| |||||| | | || | || || ||| || || || ||||| | Sbjct 11024 ACAACTCGTTCGGGAACTCGATCGAGTTCAGCAAGACCAATATCCTGGGCACGCACGTGC 11083 Query 173202 TCCTGGAATGCGCGAGGCTCTATGGCGGTGTCCAGCGGTTCATCAATGTGTCTACCGACG 173261 | ||||| |||||||| || || ||| | |||| ||| | ||| || |||| Sbjct 11084 TGCTGGAGGCTGCGAGGCTGCAT---GGGGTCAAAAGGTTTATCCACGTGAGCACGGACG 11140 Query 173262 AAGTATACGGCGAGAGCAGTCTGGGCAAAAAAGAAGGCCTCGATGAAC----ACTCGTCC 173317 | || ||||| || |||| | | | ||| |||||| | || Sbjct 11141 AGGTGTACGGAGAAGGCAGACCCG-------ACTCGGCGCCGATGACCGAGGACCATGTG 11193 Query 173318 CTCGAGCCAACAAACCCATATGCAGCAGCCAAGGCTGGTGCCGAAATGATGG-CACGTGC 173376 ||||| || || |||||||| || || | |||||||| || || | ||| || | || Sbjct 11194 CTCGAACCCACCAACCCATACGCGGCCACGAAGGCTGGCGCGGAGTTCCTGGTCAAGAGC 11253 Query 173377 ATATCACACATCGTACAAGCTACCAGTCATCGTGACGCGCGGCAACAATGTGTATGGCCC 173436 | ||| |||| | || || ||| | ||| | ||||||| ||||| || || Sbjct 11254 -TTCCACCGCTCGTTCGGTCTCCCGACCATTATCACGAGGAGCAACAACGTGTACGGACC 11312 Query 173437 GCATCAGTTCCCCGAAAAAATGATCCCAAAATTTATT 173473 ||| |||| |||||| || | ||||| || || ||| Sbjct 11313 GCACCAGTACCCCGAGAAGCTCATCCCCAAGTTCATT 11349 >seq210 Length=64616 Score = 102 bits (112), Expect = 2e-16 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 224498 AGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGG 224557 |||||||| |||| | ||||||| | | ||||||||||||||||||| | | | ||| Sbjct 53193 AGCGCGCCCAGCGCCGCGCGGTCCAAGTAGTTCGTCGGCTCATCCAGCACCAACAAGTGC 53134 Query 224558 GGGCACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCG 224617 || | | ||||| ||| ||| | | || ||||| |||||||| ||||| ||||| ||| Sbjct 53133 GGACGGTTCCACATGGCAGCAGCGATGACGAGCTTGACCTTCTGGCCGCCCGAGAGACCG 53074 Query 224618 CGGATC 224623 |||||| Sbjct 53073 CGGATC 53068 Score = 84.2 bits (92), Expect = 4e-11 Identities = 135/189 (71%), Gaps = 5/189 (3%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||| ||||| | || | |||| ||||| ||||||| |||||||| | Sbjct 52704 CGCCACTGGAAGTACTCGACCGGACTGCTGTCGAGGTGCTTCTCAACGTGGTGGAACGAG 52645 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| || |||||||||| |||| | | | |||||||| | | |||| | ||||| Sbjct 52644 TGCTGCGCCACGTACGCCAGACGCACGGCGTGGTGCTTCCAGAAGGTGCCC-GTGTCGGG 52586 Query 225101 TGTGCCTCGCCGGT--GAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAA 225158 | | || || | ||| | |||||||||||| | ||| || || || ||| || | Sbjct 52585 CGA-CGTCTCCTGCACGAGCATCTTGATGAGCGTCGACTTACCGGCGCCGTTGACACCGA 52527 Query 225159 TCAC-GCCA 225166 |||| |||| Sbjct 52526 TCACAGCCA 52518 >seq347 Length=38231 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 178021 TCTCCACATCAAACTTCTTCGAAAAGATGTTGGTGAGCTTTGAACCGTATCCATTCCTGC 178080 |||| || | |||| ||||| |||||||||| ||||| | ||||| || || | || Sbjct 29515 TCTCGACCACGAACTCGTTCGAGAAGATGTTGGCCAGCTTGGCGCCGTAGCCGTTGCGGC 29574 Query 178081 CTGCGCCAGTCCTCTCCTGGGCATCATCAAAGTTCTCGCCCGTGAGGAGGTGGCCGAAGA 178140 | | ||| ||| || || || ||||| ||||||||| ||||||||||||| Sbjct 29575 CGCCCGTGGTCTTCTTCTTCTTGTCGTCGAAGTTGCTGCCCGTGAGCAGGTGGCCGAAGA 29634 Query 178141 TGAGCTCGGGCACATAG 178157 ||||||||||||| ||| Sbjct 29635 TGAGCTCGGGCACGTAG 29651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921523970727680