Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq6666 329 3e-85 seq92 307 1e-78 seq570 163 3e-35 seq132 140 3e-28 seq884 122 9e-23 seq1033 98.7 1e-15 >seq6666 Length=2405 Score = 329 bits (364), Expect = 3e-85 Identities = 630/914 (69%), Gaps = 26/914 (3%) Strand=Plus/Plus Query 132610 TATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATA 132669 || |||||||| ||||| ||||| || || || |||| || || || | ||| Sbjct 1427 TACTCGCCCACGCGCTTCTCGAAAAAGTTCGTCTTGCCCTGCAGCGAGATCATGTCCATC 1486 Query 132670 AAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTG 132729 | || || ||||| | ||||||| ||| | | ||| | ||||| | | Sbjct 1487 CAGTCGAACGGGTTCTTTACGTTGTAGATCTTCGACACACCCAGCGAGTACAGCAGACGG 1546 Query 132730 TCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACC 132789 |||||||||||||||||||| || ||||| | | || | || | ||| ||| Sbjct 1547 TCGGCCACGAACTCGATGTACTGGCACATGAGCCCCGAGTTCATGCCGATCAGCTCCACA 1606 Query 132790 GGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCT 132848 || |||| || | ||| ||| ||||||| | ||||||||| ||||| || Sbjct 1607 GGGAGCGAGTCACGCACGAACTCGT-GCTCGATCGTCACCGCGTCGCGCACGATCTCGTG 1665 Query 132849 AACGCGCGCCGCGCTC-GGCCG-TTG--CACCAAATGCTTGAA---CATCAAGCAAGCAA 132901 ||||| || ||| ||| | ||| ||||| ||||| | ||| | ||| || | Sbjct 1666 CACGCG----GCTCTCCGGCAGCTTGTTCACCA---GCTTGGAGTACATGAGGCACGCGA 1718 Query 132902 AGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCA 132961 |||| |||| ||||||||| | | || || ||||| ||| ||| ||| |||| Sbjct 1719 AGTCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCAGGCA 1778 Query 132962 TGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCT 133021 |||||||||| || |||||||| || |||| | ||| |||||| ||||||| ||||| Sbjct 1779 TGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAACGAGCCCGAGAAGAAGATGCCCT 1838 Query 133022 CGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGG-CGATCCAG 133080 | || || ||||| |||| ||| ||||| | ||| | || || || || ||| Sbjct 1839 CCACAGCTGCGAACGCCAGCAGACGCTCCGGGTACGACGACACTC-GCGGGTCGCACCAC 1897 Query 133081 CGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAA 133140 |||||||| | || || | || || ||||| ||||| |||||||| || || Sbjct 1898 TTGAGCGCCCAGTGCGCTTTCTTCTTCACACACGGGATCGTATCGATGGCACGCAGCA-- 1955 Query 133141 CGGAGTTTCTCTTCCGAGGAACGC---ACGTAGGTGTCGATGAGGGTCGAATACATTTCC 133197 || | | || |||| | | | | ||| ||||| ||||| |||||||| || Sbjct 1956 -GGTGGTCCTTCTCCGTCGCATCCTTGATGTACGTGTCAATGAGCAGCGAATACACCTCT 2014 Query 133198 GAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGC 133257 ||||| | |||||| |||||||| || || ||||| ||||| || ||||| ||||||| Sbjct 2015 GAGTGGATGTTCTCGATGGCGATCTGGAAACCGTAGAAGCAGCGGGCCTCCGGCACCTGC 2074 Query 133258 ACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAA 133317 ||||| | ||| | | |||| || ||||| ||||||||||||||||| ||||| Sbjct 2075 ACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGAAG 2134 Query 133318 AAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGC 133377 ||||||||||||||||||||||| ||||||||||| ||| | | ||||||| | Sbjct 2135 AAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAGGTTCGCCCAGTC-CTT 2193 Query 133378 GTGTCCTTGGA-CAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTA 133436 | | | || | |||||||| ||||||| | ||||| || |||||||| || || ||||| Sbjct 2194 GAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAATGACGCCTCCGCCTTCTTGTA 2253 Query 133437 CATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCG 133496 ||| ||||| ||| | || || || || | ||| |||||| ||||| ||| Sbjct 2254 CATCTGCCACACGTCGTGCTCCTGGATCGGGAACAGCACGAACCGGTTCGGGTTCTCGAC 2313 Query 133497 CAACAGCGGCTCCG 133510 || | |||||||| Sbjct 2314 CAGGAACGGCTCCG 2327 >seq92 Length=63871 Score = 307 bits (340), Expect = 1e-78 Identities = 556/800 (70%), Gaps = 20/800 (3%) Strand=Plus/Minus Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780 ||||| | |||||||||||||||||||||||| ||||| | | || | || | | Sbjct 49728 AGCAGACGGTCGGCCACGAACTCGATGTATTGGCACATGAGCGCCGAGTTCATGCCGATC 49669 Query 132781 AGACGC-ACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGA 132838 ||| | || || |||| || | ||| ||| ||||||| | ||| ||||| | Sbjct 49668 -GACTCCACAGGGAGCGAGTCACGCACGAACTCGT-GCTCGATCGTCACCCCGTCGCGCA 49611 Query 132839 CGATTTCCCTAACGCG-CGCCGCGCTCGGCCGTTGCACCAAATGCTTGAA---CATCAAG 132894 |||| || ||||| | || || | ||| ||||| ||||| | ||| | | Sbjct 49610 CGATCTCGTGCACGCGGCTCCCCGGCAGCTTGTT-CACCA---GCTTGGAGTACATGAGG 49555 Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 | || ||||| |||| ||||||||| | | || || ||||| ||| ||| | Sbjct 49554 CTCGCGAAGTCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGG 49495 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 || ||| |||||||||| || |||||||| || || | | ||| |||||| |||||| Sbjct 49494 CCAGGCGTGAGGCCGCGCTTCTTGAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAG 49435 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGG-C 133073 | |||||| |||| ||||| | || || |||||| | ||| | || || || | Sbjct 49434 ATGCCCTCCACGGTTGCGAACGTCAGCACGCGCTCCGGGTACGACGACACTC-GCGGGTC 49376 Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTT 133133 | ||| |||||||| | || || | || || ||||| ||||| |||||||| Sbjct 49375 GCACCACTTGAGCGCCCAGTGCGCTTTCTTCTTCACACACGGGATCGTATCGATGGCACG 49316 Query 133134 CAACAAACGGAGTTTCTCTTCCGAGGAACGC---ACGTAGGTGTCGATGAGGGTCGAATA 133190 || || || | | || |||| | | | | ||| ||||| ||||| |||||| Sbjct 49315 CAGCA---GGTGGTCCTTCTCCGTCGCATCCTTGATGTACGTGTCAATGAGCAGCGAATA 49259 Query 133191 CATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGAC 133250 || || ||||| | |||||| |||||||| || || ||||| ||||| || ||||| Sbjct 49258 CACCTCTGAGTGGATGTTCTCGATGGCGATCTGGAAACCGTAGAAGCAGCGGGCCTCCGG 49199 Query 133251 CACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGC 133310 |||||||||||| | ||| | | |||| || ||||| ||||||||||||||||| Sbjct 49198 CACCTGCACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCGCTGGC 49139 Query 133311 GGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCA 133370 ||||| ||||||||||||||||||||||| ||||||||||| ||| | | |||| Sbjct 49138 AGCGAAGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAGGTTCGCCCA 49079 Query 133371 GTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTT 133430 ||| | ||| | |||||||| ||||||| | ||||| ||||| ||||| ||||| Sbjct 49078 GTCCTTCAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAACGAGGCCTCCGCTTT 49019 Query 133431 TTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTT 133490 |||||||| ||||| ||| | || || || || | ||| |||||| ||||| Sbjct 49018 CTTGTACATCTGCCACACGTCGTGCTCCTGGATCGGGAACAGCACGAACCGGTTCGGGTT 48959 Query 133491 TTCGCGCAACAGCGGCTCCG 133510 ||| || | |||||||| Sbjct 48958 CTCGACCAGGAACGGCTCCG 48939 >seq570 Length=29657 Score = 163 bits (180), Expect = 3e-35 Identities = 177/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 || |||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| | Sbjct 28593 AACAATGCAGATTTTCGTCAAGACGCTGACGGGCAAGACCATCACACTCGACGTGGAGCC 28652 Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 | ||| | | |||| | || | || || | ||||| ||||| || || ||| Sbjct 28653 GTCGGACTCGATCGACAACG-TGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCG 28711 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| ||||| | ||| ||||| |||||||| |||| ||||| || | ||||| Sbjct 28712 ACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACT 28771 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||| ||||| |||||||||| ||||||||||| || | ||||| Sbjct 28772 ACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 28823 Score = 163 bits (180), Expect = 3e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| | | Sbjct 28824 AATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACCATCACGCTCGACGTGGAGCCGTC 28883 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||| | | |||| | || | || || | ||||| ||||| || || |||||| Sbjct 28884 GGACTCGATCGACAACG-TGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACC 28942 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| ||||| |||||||| |||| ||||| || | |||||||| Sbjct 28943 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACA 29002 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| |||||||||| ||||||||||| || | ||||| Sbjct 29003 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 29051 Score = 163 bits (180), Expect = 3e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| | | Sbjct 29052 AATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACCATCACGCTCGACGTGGAGCCGTC 29111 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||| | | |||| | || | || || | ||||| ||||| || || |||||| Sbjct 29112 GGACTCGATCGACAACG-TGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACC 29170 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| ||||| |||||||| |||| ||||| || | |||||||| Sbjct 29171 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACA 29230 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| |||||||||| ||||||||||| || | ||||| Sbjct 29231 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGCGG 29279 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| | | Sbjct 29280 AATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACCATCACGCTCGACGTGGAGCCGTC 29339 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||| | | |||| | || | || || | ||||| ||||| || || |||||| Sbjct 29340 GGACTCGATCGACAACG-TGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACC 29398 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| ||||| |||||||| |||| ||||| || | |||||||| Sbjct 29399 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGCGACTACA 29458 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| |||||||||| ||||||||||| || | || || Sbjct 29459 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGTGG 29507 >seq132 Length=78195 Score = 140 bits (154), Expect = 3e-28 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| |||||||| || ||||| | ||||| ||| | | Sbjct 54331 ATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 54390 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 ||| | | |||| | || | || |||| ||||| ||||| || |||||| |||| Sbjct 54391 GACTCGATCGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGACC 54448 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| ||||| || |||| ||||| || | |||||||| Sbjct 54449 AGCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGCGACTACA 54508 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||| || ||||| |||||||||| ||||||||||| || | || ||| Sbjct 54509 ACATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGCGGTGGC 54558 Score = 134 bits (148), Expect = 1e-26 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || ||||| |||||||| || ||||| | ||||| ||| | | Sbjct 54559 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 54618 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 ||| | | |||| | || | || |||| ||||| ||||| || |||||| |||| Sbjct 54619 GACTCGATCGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGACC 54676 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| ||||| || |||| ||||| || | |||||||| Sbjct 54677 AGCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGCGACTACA 54736 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||| || ||||| |||||||||| ||||||||||| || | || ||| Sbjct 54737 ACATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGCGGTGGC 54786 Score = 134 bits (148), Expect = 1e-26 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || ||||| |||||||| || ||||| | ||||| ||| | | Sbjct 54787 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 54846 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 ||| | | |||| | || | || |||| ||||| ||||| || |||||| |||| Sbjct 54847 GACTCGATCGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGACC 54904 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| ||||| || |||| ||||| || | |||||||| Sbjct 54905 AGCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGCGACTACA 54964 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||| || ||||| |||||||||| ||||||||||| || | || ||| Sbjct 54965 ACATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGCGGTGGC 55014 Score = 129 bits (142), Expect = 6e-25 Identities = 162/217 (75%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || ||||| |||||||| || ||||| | ||||| ||| | | Sbjct 55015 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 55074 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 ||| | | |||| | || | || |||| ||||| ||||| || |||||| |||| Sbjct 55075 GACTCGATCGACAACG-TCAAGCAGAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGACC 55132 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| ||||| || |||| ||||| || | |||||||| Sbjct 55133 AGCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGCGACTACA 55192 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||| || ||||| |||||||||| |||||||||| Sbjct 55193 ACATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCG 55229 >seq884 Length=21595 Score = 122 bits (134), Expect = 9e-23 Identities = 143/191 (75%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || |||||||| |||||||| | ||||| ||| | || Sbjct 4983 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTGGAGCCGTCC 4924 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 |||||| | | | | || | ||||||| ||||| ||||| || |||||| ||||| Sbjct 4923 GACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAGGGCAT-CCCGCCTGACCA 4865 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| ||||| || |||| ||||| ||| |||||||| Sbjct 4864 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAA 4805 Query 38423 CATCCAAAAGG 38433 |||||| |||| Sbjct 4804 CATCCAGAAGG 4794 >seq1033 Length=19618 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/126 (79%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 38346 GGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGC 38405 ||||| ||| | ||||| ||||| || || | ||| ||||| |||||||| |||| ||| Sbjct 11563 GGAATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGC 11504 Query 38406 ACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAG 38464 ||||| |||||||||||||| ||||| ||| |||||||| ||||||| ||| || | Sbjct 11503 ACCCTTTCGGACTACAACATCCAGAAGGAGAGC-ACGCTGCACCTGGTGCTTCGTCTGCG 11445 Query 38465 AGGCGG 38470 || || Sbjct 11444 TGGTGG 11439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500119381544960