Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1163 491 6e-134 seq53 421 8e-113 seq4314 351 1e-91 seq4194 134 2e-26 seq1274 107 2e-18 seq1285 96.9 4e-15 seq448 86.0 8e-12 seq268 84.2 3e-11 >seq1163 Length=17587 Score = 491 bits (544), Expect = 6e-134 Identities = 1071/1585 (68%), Gaps = 25/1585 (2%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||||| || || ||||| ||||| || |||||| || || || || | ||| Sbjct 4514 TCATCTTGGTCCTTGTACTTCTCCGCGTCGGAGACCATGCGATCGATCTCGTCCTGCGAC 4573 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | || ||| || |||||||| ||||| ||||| | || |||| | ||| || | Sbjct 4574 AGTCGCCCTTTGTCATTCGTGATCGTGATCTTGTTCTCCTTGCCCGTCGACTTCTCCACG 4633 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || |||||||| || || |||||||||||||| |||| | || || || | Sbjct 4634 GCTGACACGTTCAAAATGCCGTTGACATCAACATCGAACGTTACGTCGATCTGCGGGACA 4693 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || || || || | || || | || |||| | || || Sbjct 4694 CCGCGAGGCATGGGCGGGATGCCGTCCAGATTGAACTTTCCCAGTAGATGATTGTCACGG 4753 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | | | || || || || | || | ||| |||| | | || || ||| | Sbjct 4754 GTCATTGTGCGCTCGCCCTCGAACACCTGAATCAACACCCCGGACTGGTTGTCTGCATAC 4813 Query 6869 GTTGAGAA-GATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 || ||||| || | |||| ||| || ||||||||||| || | ||| || | || Sbjct 4814 GTCGAGAACGACTGCGTCTT-CTTGGAAGGAATCGTCGTGTTACGCGGGATGAGTTTCGT 4872 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | ||||| || || | ||||| | ||| || | |||||||| |||| || Sbjct 4873 CATGACTCCACCAGCGGTCTCCAACCCAAGCGGCAGCGGGGCCACGTCCAGCAGTAGTAG 4932 Query 6988 GTCTTGAACAGATT--CGTTCCCTTCA---CCCGTTAAGATGGCGGCTTGGACCGTCGCC 7042 || || || || || | ||| || ||| ||| |||||||| || || || Sbjct 4933 ATCCTG--CAACTTGGCGGACGAGTCATTGCCACTTAGGATAGCGGCTTGCACGGTGGCT 4990 Query 7043 CCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAA 7102 || || ||||| || || || ||||| |||| || ||| || || || || ||| | Sbjct 4991 CCATAGGCGACTGCTTCGTCCGGGTTGATCGACTTGAACAGCTCCTTGCCATTGAAAAAG 5050 Query 7103 TCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCA 7162 ||| |||| || || | ||||||||| || ||||| || ||||||| ||| | || Sbjct 5051 TCCATCAACAACTGCTGCACTTTCGGGATACGAGTCGACCCTCCGACCAGAACCACCTCG 5110 Query 7163 TTCACTTTCGATTTATCGAT--CTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATAC 7220 ||||||| | | | |||| ||| ||||| || | | | ||||| ||||| Sbjct 5111 TTCACTTG-GCTCT-TCGACAGCTTCGAGTCCCGCAACACCTGCGCCACAGGGTCCATCG 5168 Query 7221 ATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGA 7280 || ||||| || || | ||||| ||||| || || ||||| ||||||| | | || Sbjct 5169 TCTTGCGGAAGAACTCGTTGCACAGATCCTCGAACCGAGCACGCGTAATGGTCGAGTTGA 5228 Query 7281 AATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACG 7340 | || | ||||| | |||||||| || |||| | | ||| |||| | || | || Sbjct 5229 AGTCGATACCGTCCAACAACGAATCGATCTCAAGGTACGCTTGCGCCGAAGTGGACAGCG 5288 Query 7341 TTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAA 7400 ||||||| |||||||| |||||||| || | |||||| | ||||||| ||| ||| | Sbjct 5289 TTCGCTTCGCGCGCTCGCACGCCGTACGGAGACGACGCATCGCACGCGAGTTCACGGCCA 5348 Query 7401 TATCTTTCTTATGTTTACGTTTAAACTCT-TCAGAGAAGTG-TCGAAGGAGTCTCGAATC 7458 ||| || | || || || ||||| ||| ||||| |||| | | || Sbjct 5349 GATCCTTGCGGTACTTGCGCTTGAACTCGGTCAC-GAAGTACTCGACCAAA-CGGTTGTC 5406 Query 7459 GAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCC 7518 || || |||||||||||||| || || ||||| ||||| || || || ||||| ||| | Sbjct 5407 AAAGTCCTCACCACCCAAGTGCGTGTCGCCCGCCGTCGCCTTCACCTCGAAGATGCCTTC 5466 Query 7519 TTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT 7578 ||| || | | | ||| || |||||||| || || ||||| ||||| || | |||| Sbjct 5467 TTCGATCGTAAGGAGCGAGACGTCAAACGTTCCGCCTCCCAGATCAAAGATCAACACGT- 5525 Query 7579 CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATT 7638 | | ||| | ||||| || || ||||| || ||||| || ||||| || || || Sbjct 5526 --TGTGCTCGCCACCCTTCTTGTCCAGGCCGTAGGCAATAGCAGCAGCCGTCGGCTCGTT 5583 Query 7639 AATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTG 7698 || ||||| || |||||| ||||| |||| | ||||| ||||| ||||| || || Sbjct 5584 GATGATACGCAGGACGTTCAGCCCAGCGATAGCGCCGGCATCCTTCGTAGCTTGGCGCTG 5643 Query 7699 CGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATA 7758 ||| ||||| || || ||||| ||||| || || || | | | |||| ||| |||| || Sbjct 5644 CGAGTCGTTGAAATACGCCGGCACCGTCACCACGGCATTCTTCACTTGCTTGCCGATGTA 5703 Query 7759 CGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAA 7818 || || ||||| || ||| ||| | || ||||| || || |||||||||| | || Sbjct 5704 CGCCTCGGCGATCTCGCGCATCTTGATCAGCACCATGGACGAGATCTCTTCAGGCTGGAA 5763 Query 7819 CTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATG-GGTTTATCCGCAGCACCGGGGA 7877 | || | || || || || | || | | | || || || | | | | || | Sbjct 5764 CGTCTTGGACTCGCCCTTGAACTGCACCACGA-CTTGAGGCTTGTTCTCCGGGCCACGAG 5822 Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937 | ||||| ||| ||| | || || || || || | | |||||| ||||| | | Sbjct 5823 TCACCTTGAACGGCCAGTGCTTGATGTCCGACTGCACTTCTGGGTCCGTGAACTTGCGGC 5882 Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997 |||| || ||||| ||||||| || ||||| | || |||||| || ||||||||| | Sbjct 5883 CGATGAGGCGCTTGACATCAAACACCGTGTTGTGGGCGTTCATAGCCACTTGGTTCTTGG 5942 Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057 |||| || ||||| ||||| || || ||||| ||||| |||||||| ||||| || | Sbjct 5943 CCGCATCACCGATCAGACGCTCGGTA---TCCGTGAACGCCACGTACGACGGGGTGGTGC 5999 Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACG 8117 | || || ||||| || || || || || ||||||||||| ||||| || || ||||||| Sbjct 6000 GGTTGCCCTGGTCATTGGCGATGATCTCCACGCGGTCGTTCTGCCACACACCAACGCACG 6059 Query 8118 AATACGTTGTTCCTAAATCAATACC 8142 | ||||| || || | |||||| || Sbjct 6060 AGTACGTCGTGCCCAGATCAATGCC 6084 >seq53 Length=72612 Score = 421 bits (466), Expect = 8e-113 Identities = 856/1266 (68%), Gaps = 19/1266 (2%) Strand=Plus/Plus Query 6887 TTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTT 6946 ||||| | || | |||||| || | | || | || ||||| | ||| || || Sbjct 377 TTCTTGGTCGGCACCGTCGTGTTACGGGCGATCAGCGTCGTCATGACACCGCCAGCCGTC 436 Query 6947 TCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTC 7006 || || || ||||||||||| ||||| |||| || | |||||| || ||| ||| || Sbjct 437 TCCAGACCCAGAGACAGAGGAGTCACATCCAGCAGCAGCAGGTCCTG--CAGCTTC--TC 492 Query 7007 CCTTCACCCGTT-------AAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTC 7059 | | |||| || ||||| || ||||| || || ||||| || || ||||| Sbjct 493 CGAGGAGTCGTTGCCGCTCAAAATGGCAGCCTGGACGGTGGCACCGTAGGCAACAGCCTC 552 Query 7060 ATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTG 7119 ||| ||||| || | || || | || || ||||| || | ||||| | || || || Sbjct 553 ATCAGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCCGACAGCAGCTGCTG 612 Query 7120 AATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATC 7179 | || ||||| || || || |||||||||| |||| || | ||| | || Sbjct 613 CACCTTGGGGATACGGGTGGAGCCACCGACCAGGACGACCTCGTGCACCTGGCTCTTGGA 672 Query 7180 GATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCAT 7239 | ||| | || || || || || || || ||||| || ||||| |||| Sbjct 673 CAGCTTGGCATCACGGAGGACCTTCTCCACGGGCTCCATGGTCTTGCGGAAGTAGTCACC 732 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 |||| ||||| ||||| |||||||| |||| | | ||| |||| ||| ||| | | Sbjct 733 GCACATGTCCTCGAAACGAGCACGGGTGATGGTCGAGTTGAAGTCAATGCCATCGAACAG 792 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 || ||||| |||||| | || |||| ||| || | ||| ||||| || ||||| || Sbjct 793 AGAGTCAATCTCAATGTAAGCCTGGGCCGACGACGAAAGCGTACGCTTAGCACGCTCGCA 852 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 || || || | |||||| || || ||| |||| | | || || || || ||||| Sbjct 853 AGCAGTCCGCAGACGACGGAGAGCGCGCTGGTTCTCCGTGATGTCCTTGCGGTGCTTACG 912 Query 7420 TTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGT 7478 || ||||| | | |||||| |||| | || | ||||| || |||||||||| || Sbjct 913 CTTGAACTCCTGCGTGAAGTGGTCGACG-AGACGGTTGTCGAAGTCCTCACCACCCAGGT 971 Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAA 7538 | || || || || || || || || || ||||| || | |||||| | || ||| | Sbjct 972 GCGTGTCACCAGCAGTGGCCTTCACCTCGAAGATGCCCTCCTCAATGGACAGCAGCGACA 1031 Query 7539 CATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCT 7598 |||| || ||||| ||||||||||| || || || ||||| || || | || || Sbjct 1032 CATCGAAGGTACCGCCACCCAGGTCGAAGATCAGCACGTTACGCTCACCGCCCTT---CT 1088 Query 7599 TATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCA 7658 | || |||||||| || || || || ||||| || || || || ||||| || ||| | Sbjct 1089 TGTCCAGACCGTAGGCAATGGCAGCGGCCGTGGGCTCGTTGATGATACGCAGGACGTTGA 1148 Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718 | || ||||| | | || || ||||||||||| || ||||| ||||| || || |||| Sbjct 1149 GACCGGCAATGGCACCGGCGTCCTTCGTCGCTTGGCGCTGCGAGTCGTTGAAATACGCCG 1208 Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCA 7778 | ||||| | || |||| | |||| | ||| |||| | | || || | || || Sbjct 1209 GCACCGTGATCACGGCGTTCTTGACCTCCTTGCCGATGAAGGCCTCGGCCACCTCGCGCA 1268 Query 7779 TTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAA 7838 | ||| | || ||||| || || ||||| || | | ||| || | || || || | Sbjct 1269 TCTTGATCAGCACCATGGACGAGATCTCCTCGGGCTGGAACGTCTTGCTCTCGCCCTTGA 1328 Query 7839 AATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTT 7898 | | || ||| || || || | || || | | ||| ||| ||| | | Sbjct 1329 ACTGCACCGTGATCTGCGGCTTGTCGCCGGCGCCCGACGACATCTTGAACGGCCAGTGCT 1388 Query 7899 TCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAA 7958 | || ||| | ||||| ||||||| ||||| | ||||| |||||||| || || | Sbjct 1389 TGATGTCGGCCTGGACGATGGGGTCCGAGAACTTGCGGCCGATCAGACGCTTGGCGTCGA 1448 Query 7959 AAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTT 8018 | || ||||| | | ||||||||| |||||||| || || || ||||| ||||| | Sbjct 1449 ACACCGTGTTGTGCGCGTTCATGGCCACCTGGTTCTTGGCGGCATCACCGATCAGACGCT 1508 Query 8019 CATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAA 8078 | | ||||| || || |||||||| ||||| || || || || |||||||| || | Sbjct 1509 C---GGTGTCCGTGAAGGCCACGTACGACGGGGTGGTGCGGTTGCCCTGGTCGTTGGCGA 1565 Query 8079 TAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAA 8138 | || || || |||||||| ||||| |||||||||||||| || || || || | || | Sbjct 1566 TGATCTCCACACGGTCGTTCTGCCACACGCCGACGCACGAGTAGGTCGTGCCGAGGTCGA 1625 Query 8139 TACCGA 8144 | |||| Sbjct 1626 TGCCGA 1631 >seq4314 Length=3299 Score = 351 bits (388), Expect = 1e-91 Identities = 844/1269 (67%), Gaps = 25/1269 (2%) Strand=Plus/Minus Query 6887 TTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTT 6946 ||||| | || | |||||| || | || || | || ||||| | ||| ||| || Sbjct 2432 TTCTTGGTCGGCACCGTCGTGTTACGCGCGATCAGCGTCGTCATGACACCGCCCGCCGTC 2373 Query 6947 TCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTC 7006 || || || || ||||| || ||||||||||| || | || ||| || ||| ||| || Sbjct 2372 TCCAGGCCCAGCGACAGCGGCGTCACGTCCAACAGCAGCAAGTCCTG--CAGCTTC--TC 2317 Query 7007 C-------CTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTC 7059 | | | || ||| ||||| || || || || || ||||| ||||| ||||| Sbjct 2316 CGACGAGTCGTTGCCGCTTAGAATGGCCGCCTGCACTGTGGCACCGTACGCGACGGCCTC 2257 Query 7060 ATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTG 7119 || ||||| |||| || || | || || ||||| || | || || | || || || Sbjct 2256 GTCCGGGTTGATCGACTTGTTGGGCTCCTTGCCGTTGAAGAACTCGGACAGCAGCTGCTG 2197 Query 7120 AATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATC 7179 | || ||||| || ||||| || || || | || | || | ||| | || Sbjct 2196 CACCTTGGGGATACGCGTCGAGCCGCCCACGAGCACCACCTCGTGCACCTGGCTCTTGGA 2137 Query 7180 GATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCAT 7239 | ||| | ||| || || || || || || ||||| || ||||| |||| Sbjct 2136 CAGCTTGGCGTCGCGCAGCACCTTCTCCACGGGCTCCATGGTCTTGCGGAAGTAGTCGCC 2077 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 |||||| ||||| || || || || || |||| | || ||| || |||| |||||| | Sbjct 2076 ACACAGGTCCTCGAACCGCGCGCGCGTGATGGTCGAATTGAAGTCCACGCTGTCGTACAG 2017 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 ||| || || || ||| | || |||| || || | ||| ||||| |||||||| || Sbjct 2016 CGAGTCGATCTCGATGTACGCCTGCGCCGATGATGAAAGCGTACGCTTGGCGCGCTCGCA 1957 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 |||||| || | ||| || || || ||| |||| | | || || || ||||| Sbjct 1956 CGCCGTGCGCAGACGCCGCAGCGCGCGCTGGTTCTGCGTCAGGTCCTTGCGGTGCTTACG 1897 Query 7420 TTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTCGAATCGAAATCTTCACCACCCAA 7476 || ||||| | ||||| |||| ||| | | ||||| || || ||||||| Sbjct 1896 CTTGAACTCCTGCACGAAGTACTCGACCAGGCGGTT---GTCGAAGTCCTCGCCACCCAG 1840 Query 7477 GTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGA 7536 ||| || || || ||||| || || || || ||||| || | || ||| | | | ||| Sbjct 1839 GTGCGTGTCGCCTGCGGTGGCCTTCACCTCGAAGATGCCCTCCTCGATGCTCAGGAGCGA 1780 Query 7537 AACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTT 7596 || || || || || || |||||||| || || || ||||| || || | || Sbjct 1779 CACGTCGAAGGTGCCGCCGCCCAGGTCGAAGATCAGCACGTTACGCTCACCGCC---CTT 1723 Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656 ||| || || ||||| | || || || ||||| || || || || ||||| || ||| Sbjct 1722 CTTGTCCAGGCCGTAGGTAATGGCAGCGGCCGTGGGCTCGTTGATGATACGCAGGACGTT 1663 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 || || ||||| | | || || ||||||||||| || ||||| ||||| || || || Sbjct 1662 GAGACCGGCAATGGCACCGGCGTCCTTCGTCGCTTGGCGCTGCGAGTCGTTGAAATACGC 1603 Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTT 7776 ||| ||||| | || |||| | |||| | ||| |||| | | || || | || Sbjct 1602 CGGCACCGTGATCACGGCGTTCTTGACCTCCTTGCCGATGAAGGCCTCGGCCACCTCGCG 1543 Query 7777 CATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTT 7836 ||| ||| | || ||||| || || ||||| || | | ||| || | || || || Sbjct 1542 CATCTTGATCAGCACCATGGACGAGATCTCCTCGGGCTGGAACGTCTTGCTCTCGCCCTT 1483 Query 7837 AAAATCAACTTCAATCATGGGTTTATCCGCA-GCACCGGGGATAACCTTATACGACCAAT 7895 || | || ||| || || || || || ||| || | ||| ||| ||| | Sbjct 1482 GAACTGCACCGTGATCTGCGGCTTGTCTCCAGGCCCCGACGA-GATCTTGAACGGCCAGT 1424 Query 7896 CTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCAT 7955 || || ||| |||| ||| |||| || ||||| | || | || ||||| || | Sbjct 1423 GCTTGATGTCGGCTTGCACCACCGGGTCGGAGAACTTGCGACCAGTGAGGCGCTTGGCGT 1364 Query 7956 CAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGAC 8015 | || || ||||| | | ||||||||| |||||||| || ||||| ||||| || | Sbjct 1363 CGAACACCGTGTTGTGCGCGTTCATGGCCACCTGGTTCTTGGCAGCGTCGCCGATCAGGC 1304 Query 8016 GTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCG 8075 | || | ||| | || || ||||| || ||||| || || || || |||||||| | Sbjct 1303 GCTC---GGTGTCCATGAAGGCCACGTATGACGGGGTGGTGCGGTTACCCTGGTCGTTGG 1247 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 | || || || |||||||| || ||||| |||||||||||||| || || || || | | Sbjct 1246 CGATGATCTCCACGCGGTCATTCTGCCACACGCCGACGCACGAGTAGGTCGTGCCAAGGT 1187 Query 8136 CAATACCGA 8144 | || |||| Sbjct 1186 CGATGCCGA 1178 >seq4194 Length=3493 Score = 134 bits (148), Expect = 2e-26 Identities = 452/696 (65%), Gaps = 17/696 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || ||||| |||| ||| || || || ||| || || || || | ||| Sbjct 1553 TCGAAGTCCTCACCGCCCAGGTGGGTGTCACCGTTGGTGGCCAGCACCTCGAACACACCG 1612 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || |||||| | || | ||||| || ||||| ||||||||||| || | || ||| Sbjct 1613 CCGTCAATGGCCAGCAGAGTCACATCGAAGGTACCGCCACCCAGGTCGAAGACCAGGACG 1672 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | || | | ||||| || | ||||| || || || || ||||| || || Sbjct 1673 TTCTTCTCACCCTGCGACTTCTTGTCAATGCCGTAGGCAATGGCAGCAGCCGTAGGCTCG 1732 Query 7637 TTAATAATACGAAG-ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || || || | || | | || || ||||| || | ||||| || || || || || Sbjct 1733 TTGATGATGCGCTGCACCG-TGAGACCGGCAATGGTACCGGCATCCTTGGTAGCCTGACG 1791 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 || | ||||| |||||||| || ||||| ||||| ||||| || | |||| Sbjct 1792 CTGGGCGTCGTTGAAGTAGGCGGGCACCGTCACGACGGCGTCGAACACCTCGCGGCCGAT 1851 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 || |||| ||| | ||||| ||||| || ||||| | || | ||| || | || Sbjct 1852 GTAGCCCTCCGAGATCTGCTTCATCTTGGTGAGCACCATGGCCGAGACCTCCTCGGGGGC 1911 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 ||||| | | || || || | || || ||||| | ||| || ||| | | Sbjct 1912 GAACTGGCGCTTCTCGCCCTTGACCTCCACCTCAATGAAGGGCTT-GCCG--TCCTTGTT 1968 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 | | | || | | ||| | ||| | || ||| | ||| |||| | Sbjct 1969 CACGAGTTCGTAGGGCAGCAGCTTCTTGTCGGCCTGCACCGACTTGTCGTTGTACTTGCG 2028 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||||| |||||||| |||| || | || || | ||||| |||| | |||||||| Sbjct 2029 GCCGATGAGACGCTTGACATCGAACAGCGTCTTCTCCGGGTTGATGGTGGCCTGGTTCTT 2088 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATT---TTCCGTAAACGCGACGTACGATGGGGT 8052 || |||| ||||| ||||| || | || ||| ||||||||||||| || || Sbjct 2089 GGCGCCGTCACCGATCAGACGCTCGTCGTTCGAGTCC---CACGCGACGTACGAGGGCGT 2145 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTAC---GCGGTCGTTTTGCCAGACGCC 8109 | || || || |||||||| || || || || || |||| || | ||| ||| Sbjct 2146 GATGCGGTTGCCCTGGTCGTTGGCGATGATCTCCACCTTCTGGTCCTTGT---AGATGCC 2202 Query 8110 GACGCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 |||||||| || || || || | ||||| ||||| Sbjct 2203 CACGCACGAGTAGGTCGTGCCCAGGTCAATGCCGAT 2238 >seq1274 Length=16964 Score = 107 bits (118), Expect = 2e-18 Identities = 216/318 (68%), Gaps = 2/318 (1%) Strand=Plus/Plus Query 22507 ACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGG-GCGAC 22565 || ||||| | ||||| ||||| || || || || || | | | | |||| | | | Sbjct 844 ACTCCGTTCCATCCGCGATCACCCTACGGTGTCGCGAAGCAGTTCGCTTTTTGGAGTGTC 903 Query 22566 AGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCACGA 22625 || || || | ||| | |||| |||||||| || || || | ||||||||||| Sbjct 904 -GTGAACCATCGCGAAGCCTACGCCATGTTTGCCGTGAACGGGATTTTATTCAACCACGA 962 Query 22626 ATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAATAT 22685 | || |||| || || |||||| || || || || || | | ||| | ||| Sbjct 963 AAGCCCCCGACGTGGACCAACCTTCGTCACTCGCAAGATCACCCGAGCTGTTGTGCGTAT 1022 Query 22686 CAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTGGGG 22745 |||| |||| | || || | | | || ||||| || ||||||||||| ||||| Sbjct 1023 TCGTGCTGGTATTGAGAAGTGCCTCTTTGTGGGGAACCTCGACGCGAAACGAGACTGGGG 1082 Query 22746 TCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAACCGGAAGA 22805 || || ||||| |||||| | || |||||| ||| | ||||| |||| ||||| || Sbjct 1083 CCACGCTCGCGACTACGTGGAGTGCATGTGGCGAATGCTTCAACATGATACTCCGGATGA 1142 Query 22806 TTTTGTTATTGCAACAGG 22823 ||||||| |||| || || Sbjct 1143 TTTTGTTGTTGCTACTGG 1160 >seq1285 Length=16090 Score = 96.9 bits (106), Expect = 4e-15 Identities = 196/288 (68%), Gaps = 11/288 (4%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || ||||| |||| ||| || || || |||| | ||||| || ||||| || Sbjct 13976 TCGAAGTCCTCACCGCCCAGGTGCGTGTCACCGCCGGTGGACTTGACCTCGAAGATGCCG 14035 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||| | | ||| ||||| || ||||| ||||||||||| || || || ||| Sbjct 14036 TTCTCGATGGACAGGATCGACACATCGAAGGTACCGCCACCCAGGTCGAAGATCAGCACG 14095 Query 7577 TT------CGTATCGTC---GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCC 7627 || | | |||| | | |||| | || || ||||| |||| || || ||| Sbjct 14096 TTGCAGGCCTTGCCGTCCGTGCCGGCGTTCGTGTCCAGGCCGTAGGCGAGGGCGGCGGCC 14155 Query 7628 GTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGT 7686 || || || || || || || ||| || ||||||||| || | | || || || || Sbjct 14156 GTGGGCTCGTTGATGATGCGCTTGAC-GTCCAGGCCAGCGATGGAGCCGGCGTCCTTGGT 14214 Query 7687 CGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGC 7734 || || || ||| ||||| |||||||| || || || || ||||| Sbjct 14215 CGACTGACGCTGCTGGTCGTTGAAGTAGGCGGGCACGGTGACCACCGC 14262 >seq448 Length=32517 Score = 86.0 bits (94), Expect = 8e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 184211 GCGTCACGCACGTTCT-TACATTTACCCCTAAGCGGAAAAACACCGTAATGATCACGACC 184269 || |||||||| ||| || ||| || | ||| ||||| ||||| || || ||||| || Sbjct 22581 GCATCACGCACATTCAATAGCTTT-CCGCGAAGAGGAAACACACCATACTGGTCACGCCC 22639 Query 184270 AACAACTGAAAGACCAGCAATTGCAAGTGTTTTTGCAGAATCACCTTCGGTAATAATAAG 184329 |||||||| || ||||| | ||| || | || || ||||||||||| || | |||||| Sbjct 22640 AACAACTGCCAGTCCAGCCACTGCTAGGGCCTTAGCTGAATCACCTTCTGTCAAAATAAG 22699 Query 184330 AGTACACTTACCAGAGTGTGTGGTACCGGCTTTATTGGCATCGTCGAGTTTTGG 184383 | ||| | || ||| | | ||||| |||||| || ||||| || || Sbjct 22700 CGAACATTCACTTGAGCGAGGTCCGCCGGCGAGATTGGCGTCCTCGAGCTTAGG 22753 >seq268 Length=42350 Score = 84.2 bits (92), Expect = 3e-11 Identities = 315/487 (65%), Gaps = 13/487 (3%) Strand=Plus/Plus Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 || ||||||| | || || ||| | ||||| || || | | ||| ||| || ||| Sbjct 16278 CCGGCAATAGCACCAGCTTCCTTCATGGCTTGACGCTGGAAGTAGTTGAAGCAGCCCGAC 16337 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || |||| ||||||| | | || | || || || || | ||||| | || ||||| Sbjct 16338 ACTGTTATAACCGCGTACTTTACCTCTTTGCCTAGGTAGGTCTCCGCCGTCTCCCTCATT 16397 Query 7781 TTGGTAAGAACCAT--CGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAA 7838 || || | ||| |||||| |||| | | | ||||| ||| |||||||| || Sbjct 16398 TTATACAGCAGCATGGCGATGA--TCTCCACCGGCTCAAACGTTTTGGTTTCACCCTTGT 16455 Query 7839 AATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTT 7898 | | ||| | | | ||| ||||| | | || | |||| | ||| ||||| | Sbjct 16456 ACTGAACCACCACCTGGGGACTATCCTCTGGCCCACGCGCCACCTCAAACGGCCAATACT 16515 Query 7899 TCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCAT--C 7956 | || | || || || | | | ||||||||||||| ||||| | | ||||| | Sbjct 16516 TGATGTTCTCCTGCACTTCTGGATCCGAAAACTTTCGGCCGATTAATTG--GTGCATGCC 16573 Query 7957 AAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACG 8016 || | |||||| | | |||| | |||| ||| || || || ||||| |||| Sbjct 16574 GAAGATTGTGTTCCTTGCGTTCCTAATCATTTGACACTTGGCAGCTTCACCGATCAGACA 16633 Query 8017 TTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGAT-TCCCTTGGTCGTTCG 8075 || || ||||| ||||| || || || || |||| || ||||| | ||| | Sbjct 16634 CGCAGTA---TCCGTGAACGCCACATATGACGGCGTCGAGAAATATCCCTCTCT-GTTAG 16689 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 ||| || || ||||| || | || | ||||| || | ||| |||| || || | || Sbjct 16690 GAATTATCTCCACGCGCTCATCGCGCGACACGCCCACACGTGAACACGTCGTGCCCAGAT 16749 Query 8136 CAATACC 8142 |||| || Sbjct 16750 CAATGCC 16756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635064967816960