Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq448 86.0 5e-11 >seq448 Length=32517 Score = 86.0 bits (94), Expect = 5e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 429289 ACGTACATTCAATGGTTTTCCCTTAAGTGGAAATACGCCATAATAATCTCGACCAATAAC 429348 ||| ||||||||| | ||||| ||| ||||| || ||||| | || || |||| ||| Sbjct 22586 ACGCACATTCAATAGCTTTCCGCGAAGAGGAAACACACCATACTGGTCACGCCCAACAAC 22645 Query 429349 ATTTAGTCCAGACATTGCAAAAGTTTTAGCTGAATCTCCTTCCGTCAAAATAAGTGTACA 429408 ||||||| || ||| | | ||||||||||| ||||| ||||||||||| | ||| Sbjct 22646 TGCCAGTCCAGCCACTGCTAGGGCCTTAGCTGAATCACCTTCTGTCAAAATAAGCGAACA 22705 Query 429409 TT 429410 || Sbjct 22706 TT 22707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028844154746560