Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1922 244 1e-58 seq1038 224 1e-52 seq6666 201 1e-45 seq92 201 1e-45 seq1232 176 6e-38 seq850 161 1e-33 seq1082 143 3e-28 seq63 143 3e-28 seq803 123 3e-22 seq760 116 5e-20 seq1635 109 7e-18 seq281 104 3e-16 seq921 95.1 1e-13 seq1230 89.7 6e-12 seq2080 86.0 8e-11 seq20 86.0 8e-11 >seq1922 Length=11443 Score = 244 bits (270), Expect = 1e-58 Identities = 340/465 (73%), Gaps = 10/465 (2%) Strand=Plus/Plus Query 1573779 CCGTGGATCGAAAAGTATCGCCCTATGGTGCTCGACGACATTGTCGGCAACGAGCACGCC 1573838 |||||| | || ||||| || || ||||| | ||| | || |||||| || | Sbjct 6258 CCGTGGGTGGAGAAGTACCGGCCGCGCGTGCTGGCGGACGTGGTGGGCAACCGCGACACG 6317 Query 1573839 GTCGCCTATCT-CAGAGCGCTGGCTGCCGACGG-CGACATGCCCAACCTCTTGCTGGCGG 1573896 || || ||| ||| || |||| || | ||| | ||||| | ||||| | ||| ||| Sbjct 6318 GTGGCGAGTCTGCAG-GCCATGGC-GCAGGCGGGCAACATGACGAACCTGATCCTGTCGG 6375 Query 1573897 GTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGGCG 1573956 | ||||| ||||||||||||||||||||||| |||||||||||| | || |||||| Sbjct 6376 GCCCGCCGGGCACGGGCAAGACCACGAGCATTTTGTGTCTGGCGCGCGAGCTGCTGGGCG 6435 Query 1573957 CGGCCGCC-GACG-AGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGT 1574014 || || || | |||| ||||| || ||||||||||||||||| |||||| ||||| Sbjct 6436 --GCAGCATGAAGCAGGCGGTGCTGGAGCTCAACGCGTCGGACGACCGCGGCATCGACAC 6493 Query 1574015 CGTGCGCAAGATCATCAAGCACCACGCCTCCAAGAGGATCGAC-CTGCCGCCCGGACGCC 1574073 ||||||| | |||||| ||| ||| | | ||| ||||| || || |||| Sbjct 6494 GGTGCGCAGTAAGATCAAGATGTTCGCGCAGCAGAAGGT-GACGCTGCCCCCGGGCCGCC 6552 Query 1574074 ACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGC 1574133 ||||| | | ||||| ||||||||||||| | | ||||| |||||||||||||| |||| Sbjct 6553 ACAAGATCGTGATCCTGGACGAGGCCGACTCCATGACGTCCGCGGCCCAGCAGGCGCTGC 6612 Query 1574134 GGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGT 1574193 | ||||||||| | | | ||| |||||||| || ||||| ||||||| ||| Sbjct 6613 GCCGCACCATGGAGATCTTCTCGGCCACCACGCGCTTCGCGCTGGCCTGCAACAACTCGA 6672 Query 1574194 CGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCT 1574238 | | | |||| || || |||| || ||||||||||| ||||||| Sbjct 6673 CCAAGATCATTGAACCCATCCAGAGCCGCTGCGCCATCCTGCGCT 6717 >seq1038 Length=19247 Score = 224 bits (248), Expect = 1e-52 Identities = 310/431 (72%), Gaps = 2/431 (0%) Strand=Plus/Minus Query 18060 CATGAGCACATTCGGCAAGGTATTTAGGGTCACCACCTTTGGCGAGTCGCACGGGGCGGG 18119 ||||||||| |||||| | || | || || ||||| |||||||||||| | ||| Sbjct 9743 CATGAGCACCTTCGGCCGCTTCTTCCGCGTGACGACCTTCGGCGAGTCGCACTGCAAGGG 9684 Query 18120 CGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCA 18179 ||| ||||||||| | |||||||||||||||| || | ||| |||||||||||||||| Sbjct 9683 CGTAGGCTGCATCGTGGACGGCGTGCCGCCGTCGCTGGCGCTGACCGAGGCCGACATCCA 9624 Query 18180 GCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCC 18239 ||| ||| | || ||||| || |||||| || || | ||||||||| ||||| Sbjct 9623 GCCGCAGCTCACGCGCCGCCGCCCCGGCCAGAGCAAGCTCACGACGCCGCGCGACGAGAA 9564 Query 18240 CGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGG 18299 || || | |||| | ||||||||||| ||||| ||||||||| ||||||| | Sbjct 9563 GGACACGGTGACCATCATGAGCGGCACGGAGAAGGGCCTGACGCTCGGCACGCCCGTGGC 9504 Query 18300 CCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCC 18359 ||||| ||| ||||| || || ||| ||||| || ||| | ||||||| Sbjct 9503 GCTCTTCGTGCCCAACGAGAACGTCCGTCCCAAGGACTACAAGGAGATGGACCAGGTGCC 9444 Query 18360 GCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCA-TCAAGGCGTCGTCGG 18418 || ||| |||||||||||||| ||| | |||||||||| | | | | | | Sbjct 9443 TCGCCCCGGCCACGCCGACTACACGTACCAGATGAAGTACGGCACGCGCGCCAGCAGC-G 9385 Query 18419 GCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCG 18478 |||| |||||| | || ||||||||| || ||||| ||||| || || || |||| Sbjct 9384 GCGGCGGCCGGGCCAGCGCGCGCGAGACCATCGGCCGCGTGGCCGCTGGGGCCGTGGCCG 9325 Query 18479 AGAAATGGCTC 18489 |||| |||||| Sbjct 9324 AGAAGTGGCTC 9314 Score = 129 bits (142), Expect = 7e-24 Identities = 110/136 (81%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 19064 GGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTGCTTTGACAAGAT 19123 ||| ||||||||| ||||||| ||||| || || |||||||||||||| |||||||| Sbjct 8879 GGTCACGTGCGTGATCCGCAACGCGCCGGTGGGTCTGGGCGAGCCGTGCTTCGACAAGAT 8820 Query 19124 CGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGATTCGAGATTGG 19183 |||| | | | |||||||||||| |||| ||||||||||||||||| |||||||| || Sbjct 8819 GCAGGCGGTGTTGGCCCACGCCATGATGTCTATCCCGGCCACCAAGGGCTTCGAGATCGG 8760 Query 19184 CAGCGGGTTTGCGGGT 19199 ||||| ||||| Sbjct 8759 TTCGGGGTTCTCGGGT 8744 >seq6666 Length=2405 Score = 201 bits (222), Expect = 1e-45 Identities = 225/298 (76%), Gaps = 2/298 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||||||||||||||||||||| ||||| ||| | |||| | ||| || Sbjct 2015 GAGTGGATGTTCTCGATGGCGATCTGGAAACCGTAGAAGCAGCGGGCCTCCGGCACCTGC 2074 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || || |||| ||||||||||||| |||||||||||||||||| ||||| Sbjct 2075 ACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGAAG 2134 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || ||||| ||||||||||| ||| ||||||| ||| | || | |||||| | Sbjct 2135 AAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAGGTTCGCCCAGTCCTTG 2194 Query 869813 GTGTCG-GCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871 |||| || | ||||||| ||||||||| ||||||| || ||||| ||||| ||||| Sbjct 2195 AGGTCGTGCAC-CAGGTCCAGCTCCTCGGCCGTCCAGAATGACGCCTCCGCCTTCTTGTA 2253 Query 869872 CATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCG 869929 ||||| ||| || | || | |||| ||||| || || || ||||| ||||| ||| Sbjct 2254 CATCTGCCACACGTCGTGCTCCTGGATCGGGAACAGCACGAACCGGTTCGGGTTCTCG 2311 Score = 197 bits (218), Expect = 2e-44 Identities = 238/319 (75%), Gaps = 10/319 (3%) Strand=Plus/Plus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||||| |||||||||||||||| |||||||||||| |||||||||| |||||||| Sbjct 1417 CGCCTTGGAGTACTCGCCCACGCGCTTCTCGAAAAAGTTCGTCTTGCCCTGCAGCGAGAT 1476 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTT-CGCATCCGAGCGACG 868808 || |||||||| ||||||||| |||||| ||| | || || ||||| Sbjct 1477 CATGTCCATCCAGTCGAACGGGTTCTTTACGTTGTAGATCTTCGACACACCC-AGCGAGT 1535 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 ||||| |||||||| || ||||||||||||||||||||||| || | ||||||||||| Sbjct 1536 ACAGCAGACGGTCGGCCACGAACTCGATGTACTGGCACATGAGCCCCGAGTTCATGCCGA 1595 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 | ||| |||| || ||||| || | ||| ||||| | ||||||| || || ||| | Sbjct 1596 TCAGCTCCACAGGGAGCGAGTCACGCACGAACTCGTGCTCGATCGTCACCGCGTCGCGCA 1655 Query 868929 TGATCTGCCTGGGCACGTCGG----CCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGG 868984 ||||| | ||||| ||| ||| ||||||| || ||| | | ||| | ||| Sbjct 1656 CGATCT---CGTGCACG-CGGCTCTCCGGCAGCTTGTTCACCAGCTTGGAGTACATGAGG 1711 Query 868985 CAGGCAAAGTCGCAGTGCA 869003 || || ||||| ||||| Sbjct 1712 CACGCGAAGTCCGTGTGCA 1730 Score = 168 bits (186), Expect = 8e-36 Identities = 208/280 (74%), Gaps = 7/280 (3%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| || ||||||| ||||| ||| ||||| |||||||||||||||||| Sbjct 1733 CCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCAGGCATGAGGCCGCGCTTC 1792 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||||| |||||| ||||||||| ||||||||||| || || || || Sbjct 1793 TTGAGCCAGAAGATGGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCCACAGCTGCGAAC 1852 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGA-GGCCCTC-CTTGTTGATCCACTTCATCGCCC 869357 | | || ||||| | ||| ||| | | ||| | || | |||||| | ||||| Sbjct 1853 GCCAGCAGACGCTCCG----GGT-ACGACGACACTCGCGGGTCGCACCACTTGAGCGCCC 1907 Query 869358 AGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTT 869417 ||| || || ||| |||| |||| | ||| |||||||| || | ||||||||||| | Sbjct 1908 AGTGCGCTTTCTTCTTCACACACGGGATCGTATCGATGGCACGCAGCAGGTGGTCCTTCT 1967 Query 869418 CGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATA 869457 | | || ||||||| || ||||| || || |||||||| Sbjct 1968 CCGTCGCATCCTTGATGTACGTGTCAATGAGCAGCGAATA 2007 >seq92 Length=63871 Score = 201 bits (222), Expect = 1e-45 Identities = 225/298 (76%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||||||||||||||||||||| ||||| ||| | |||| | ||| || Sbjct 49251 GAGTGGATGTTCTCGATGGCGATCTGGAAACCGTAGAAGCAGCGGGCCTCCGGCACCTGC 49192 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || || |||| ||||||||||||| |||||||||||||||||| ||||| Sbjct 49191 ACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAGCGAAG 49132 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || ||||| ||||||||||| ||| ||||||| ||| | || | |||||| Sbjct 49131 AAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAGGTTCGCCCAGTCCTTC 49072 Query 869813 GTGTCG-GCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871 |||| || | ||||||| ||||||||| ||||||| ||||||||| || || ||||| Sbjct 49071 AGGTCGTGCAC-CAGGTCCAGCTCCTCGGCCGTCCAGAACGAGGCCTCCGCTTTCTTGTA 49013 Query 869872 CATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCG 869929 ||||| ||| || | || | |||| ||||| || || || ||||| ||||| ||| Sbjct 49012 CATCTGCCACACGTCGTGCTCCTGGATCGGGAACAGCACGAACCGGTTCGGGTTCTCG 48955 Score = 152 bits (168), Expect = 6e-31 Identities = 208/283 (73%), Gaps = 13/283 (5%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| || ||||||| ||||| ||| ||||| ||| |||||||||||||| Sbjct 49533 CCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCAGGCGTGAGGCCGCGCTTC 49474 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| ||||| | |||||| ||||||||| ||||||||||| |||| || || Sbjct 49473 TTGAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCCACGGTTGCGAA- 49415 Query 869300 CCGATGAGC---CGCTCGGCAAAGGTGTCGA-GGCCCTC-CTTGTTGATCCACTTCATCG 869354 || | ||| ||||| | ||| ||| | | ||| | || | |||||| | || Sbjct 49414 -CG-TCAGCACGCGCTCCG----GGT-ACGACGACACTCGCGGGTCGCACCACTTGAGCG 49362 Query 869355 CCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCT 869414 |||||| || || ||| |||| |||| | ||| |||||||| || | |||||||||| Sbjct 49361 CCCAGTGCGCTTTCTTCTTCACACACGGGATCGTATCGATGGCACGCAGCAGGTGGTCCT 49302 Query 869415 TTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATA 869457 | || | || ||||||| || ||||| || || |||||||| Sbjct 49301 TCTCCGTCGCATCCTTGATGTACGTGTCAATGAGCAGCGAATA 49259 Score = 96.9 bits (106), Expect = 4e-14 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 || |||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 54271 GCATTGGAGTACTCGCCCACGCGTTTCTCGAAAAAGTTGGTCTTGCCCTGCAGCGAGATC 54212 Query 868751 AACTCCATCCACGGGAACGGGTT 868773 | |||||||| ||||||||| Sbjct 54211 ATGTCCATCCAATCGAACGGGTT 54189 Score = 95.1 bits (104), Expect = 1e-13 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| |||||||| || ||||||||||| ||||||||||| | | |||||||||||| Sbjct 49728 AGCAGACGGTCGGCCACGAACTCGATGTATTGGCACATGAGCGCCGAGTTCATGCCGATC 49669 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATC 868912 | |||| || ||||| || | ||| ||||| | ||||||| Sbjct 49668 GACTCCACAGGGAGCGAGTCACGCACGAACTCGTGCTCGATC 49627 >seq1232 Length=16645 Score = 176 bits (194), Expect = 6e-38 Identities = 347/506 (69%), Gaps = 18/506 (4%) Strand=Plus/Plus Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGG-CGGGCCTGGTGCGCAGATAGTACATGC 1627039 || ||| ||||| |||| |||||||||||| ||||| | ||||| |||||||||| Sbjct 317 CTTGTCCACGGTGAACTTGATGGCGTCGGCTTTCGGGCGTCC-GCGCATGTAGTACATGC 375 Query 1627040 CGGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGC--GCTCGGGCGT 1627097 |||||||||| || ||| |||||| |||||||||||||| || ||| | || Sbjct 376 CGGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATCGACGTGA-GCTTGCTGATG-GT 433 Query 1627098 CGCGTCGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGC 1627157 || ||||||| || | |||||||||||| |||||| | || | |||| ||||| Sbjct 434 CGGGTCGGCGATGTGGATGTTGAGCGACTGACTCTGGCAAATGTACGCACCGCGGTCGGC 493 Query 1627158 CGCCATGTCGATGGTGACCCGGTTGGGC---ACCTCCCACACGGTCTTGAAGATGGCCTT 1627214 || || ||| | ||| || || | ||||||||| |||||| | | |||| Sbjct 494 CGACAGGTCCAGC---ACCGCCTTCTGCTTGATCTCCCACACCGTCTTGTACTTCTCCTT 550 Query 1627215 GAGGTCGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGAG 1627274 || || | ||| | | | | | || |||||| |||||| | | || Sbjct 551 GACGTGGTCCGGGATCGCCTTGACGTT------CTGCACGGAGCCGCTGTCGTTCAAGAT 604 Query 1627275 CCTGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGGCG 1627334 | || ||| | ||| |||||||| | |||| || | ||||| ||| | ||||| Sbjct 605 CTGGTTGCGCACGTCCGGCGTCCAGATGCCGAGCTCGATCAGCTCCTTCATCAGGTACTT 664 Query 1627335 GTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGAC 1627394 |||||| | || || || || | ||||| ||||| |||| |||||| ||| Sbjct 665 GTTGACGATCGTGAACTCTCCAGCCAGCACTCGGCGGTTGTACATGTTGGACGTGTACGG 724 Query 1627395 CTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCAC 1627454 |||| | |||| |||| || |||||||| | ||| | ||||| |||||| | ||||| Sbjct 725 CTCGATAGACTCGTTGTTTCCAAGGATCTGGGCCGTGGAAGCCGTCGGCATGGGGGCCAC 784 Query 1627455 GAGGAGCGAGTTGCGCAGGCCGTGCT 1627480 || ||||||||||| || ||||||| Sbjct 785 CAGCAGCGAGTTGCGGAGTCCGTGCT 810 Score = 150 bits (166), Expect = 2e-30 Identities = 208/291 (71%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || |||||| ||||| ||||| ||||||||||| || || |||||||| | || ||| || Sbjct 1712 GCCCTGGTCCACGTACCGCGCGGTGTCGTTAAACACCCGCAGCATGGGGATGATGCCATT 1771 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 |||| |||||| ||||| | |||| | || ||| || | |||||| | Sbjct 1772 GGACGAGCCGTTCGTGCCTCGGATGTAGCTGTTGGTGGCTCGGATGTTGTGCATACTGAT 1831 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 ||| || || |||||| | || ||||| || || || || | ||||||||| ||||| Sbjct 1832 GCCAATACCTCCGGCCCATTTAGAGATACAGGCACATTGCTTTAACGTGTCGTAAATGCC 1891 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 || || |||||| | | |||| ||| || ||||| ||||| ||| ||| ||| ||| Sbjct 1892 TTCAATTGAGTCGTCTTGCATGGCCAATAGGAAGCAAGACGACAGTTGTGGGCGCGGCGT 1951 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACAT 1630352 ||||||||| || || || || || || ||||| ||| ||||||| Sbjct 1952 GCCGGCGTTAAAAAGTGTCGGGGTGGCATGCGTGAAAAACATTTGCGACAT 2002 Score = 107 bits (118), Expect = 2e-17 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 1628372 CGCCGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCAC 1628431 |||| ||||||| | || || || |||||| || ||| |||| ||| | |||| Sbjct 1486 CGCCCCAGCACTCATAGAGTCCAGGGGCCTCGTTAGGGCAATAGAGACTCCACTTGCCAT 1545 Query 1628432 CGGTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCG 1628491 || || | | ||| || || ||| | ||| || ||||| || |||||||| | Sbjct 1546 TGGCTTCCACCCTCTTCATGAACAGATCAGGCACCCAAAGGGCGTAGAACAGGTCGCGAG 1605 Query 1628492 CCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGT 1628551 | |||| | ||| |||||||||||||| |||||| | | |||| | || |||| Sbjct 1606 CGCGGTGCAACTCGTTGCCGTGGTTCTTACGGAGGTCCAAGAACTCGAACACATCTGCGT 1665 Query 1628552 GCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||| ||||||| ||| ||| |||| |||||| |||||||| ||||| Sbjct 1666 GCCAAGGCTCCAAATAGATGGCGAAGGAGCCCTTACGCTTGCCTCCGCC 1714 Score = 95.1 bits (104), Expect = 1e-13 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 1627791 GTAGACCGTCTCAAAGATGGCCCGGTTGAGGCGCCGCGCGCCGGCGCTCTCCCACGGCAG 1627850 ||||| ||||| |||||| | |||||| ||| || ||||||| ||| Sbjct 974 GTAGATGGTCTCGAAGATGTTCTTGTTGAGCTCCCGGGCCTTCTCGCTCTCGAACGCGTA 1033 Query 1627851 GTCCATCATGGCAAACACGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCG 1627910 || ||| | | |||| |||| ||||||||||| ||||| | || || || ||||| || Sbjct 1034 GTTCATGAGGATAAACGCGTCCGCGAGGCCCTGGACGCCAATACCGATGGGGCGGTGACG 1093 Query 1627911 CAGGTTCGAGTGGCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAG 1627970 || ||| || | ||| |||||| ||| ||||||| ||||| |||||| || ||| | Sbjct 1094 CATGTTGGACTTGCGCGCCTCGATCACGGGGTAGTAGTTGACGTCGATGACCTTGTTTAA 1153 Query 1627971 GTTGC 1627975 ||||| Sbjct 1154 GTTGC 1158 >seq850 Length=22172 Score = 161 bits (178), Expect = 1e-33 Identities = 254/361 (70%), Gaps = 2/361 (1%) Strand=Plus/Minus Query 92603 GGCGATCTGGCGCGTGAGGGCCTCCTGCACCTGGAAGCGGTCGGAAAACATGTCGACGAT 92662 ||||||||| ||||| |||||||||||| | |||| || || | ||| || Sbjct 11124 GGCGATCTGCTTGGTGAGTCGCTCCTGCACCTGCAGGCGGCGCGAGAAGACCTCGCTGAC 11065 Query 92663 GCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGTGGGCAGGTAGCCCACGTGGGCCTT 92722 ||||| || |||||| || || | | | |||| | || | |||||| | ||| |||| Sbjct 11064 GCGCGCGAGCTTGCTGAGCCCCAGCACCTTGCCGTTCGGGATGTAGCCGATGTGCACCTT 11005 Query 92723 GCCCATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCGACGTCGCGCACGAT 92782 |||| | || |||| || |||||||||||||||||| | | ||||| |||||||||||| Sbjct 11004 GCCCGTGAACGGCACCATGTGGTGCTCGCACATGGAGTACAGGTCGATGTCGCGCACGAT 10945 Query 92783 CACCATCTCGCCCGAGGCCTCGGCAAAGAGCGCGTCGCCGATGGCCTCGGCCAGCGTCAT 92842 ||||||||| | | |||| | || | || ||| | | |||||||| || Sbjct 10944 GACCATCTCGTCGTGGTCCTCCTCGAACACGGCCTCGTTCAGCACGTCGGCCAGGCTCTG 10885 Query 92843 GCGGTGGCCGCGCGTGCGCTCCACCATGGCCTTGGCCACGCGCATCGGCGTGTCCAGGAG 92902 || || ||| ||| | || || |||||||||| |||||| ||||| | || || Sbjct 10884 GCCGTAGCCCTTGGTGTTGTACAGCAGCGCCTTGGCCATGCGCATGGGCGTCTTCACCAG 10825 Query 92903 GCCCTCGCGCCGCA-CGTCCTCGCCCAGGCAGGCCAGCAGCGTCCTCGTGGCGTCGGCCA 92961 ||||| || |||| |||||| || | ||| | ||||||||| || ||| | |||| Sbjct 10824 CCCCTCACG-CGCAGGGTCCTCTCCGATGCACTCGAGCAGCGTCGTCACGGCCGCCGCCA 10766 Query 92962 T 92962 | Sbjct 10765 T 10765 >seq1082 Length=18585 Score = 143 bits (158), Expect = 3e-28 Identities = 166/221 (75%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | || || ||||||||||||||||||||||| || || Sbjct 857 GCTTGGCGAGCTCACCCGGGAGCATAAGACGCACGGCGGTCTGGATCTCGCGGCTGGAGA 916 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||| |||||| | ||| ||| ||||||||| | | ||||||| |||| | Sbjct 917 GCGTCGACTTCTTGTTGTAACGCGACAGCTTGCCGGCCTCCGAGGCGATGCGCTCGAAGA 976 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTG-TTGGAGATGCCCACGTCGGGG 1254521 ||||||||| ||||||||||||| |||||| | | | ||| ||||||| ||||||| Sbjct 977 TGTCGTTGATGAACGAGTTCATGATCGACAT-GCCGCGCTTGCTGATGCCCGTGTCGGGG 1035 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 |||||||| ||||||||||||||| | | ||||||||| Sbjct 1036 TGCACCTGACGCAGCACCTTGTAGATGTAGGTCGAGTACGA 1076 >seq63 Length=69567 Score = 143 bits (158), Expect = 3e-28 Identities = 195/269 (72%), Gaps = 5/269 (2%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | || || |||||||| |||||||||||||| || || Sbjct 42020 GCTTGGCGAGCTCTCCCGGGAGCATGAGACGCACGGCCGTCTGGATCTCGCGGCTGGAGA 41961 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||| |||||| | ||| ||| ||||||||| | | ||||||| |||| | Sbjct 41960 GCGTCGACTTCTTGTTGTAACGCGACAGCTTGCCGGCCTCCGAGGCGATGCGCTCGAAGA 41901 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTG-TTGGAGATGCCCACGTCGGGG 1254521 ||||||||| ||||||||||||| |||||| | | | ||| ||||||| ||||||| Sbjct 41900 TGTCGTTGATGAACGAGTTCATGATCGACAT-GCCGCGCTTGCTGATGCCCGTGTCGGGG 41842 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGAGGTGTAGTTTTTCTTGCGC 1254581 |||||||| ||||||||||||||| | | ||||||||| | | ||||||| | Sbjct 41841 TGCACCTGACGCAGCACCTTGTAGATGTAGGTCGAGTACGATTCGACGCGCTTCTTGCCC 41782 Query 1254582 TGGCCGCGGCCGCGCTTGCCGACCTTGGC 1254610 | ||| ||| ||||||| |||||| Sbjct 41781 TTGCCCTTGCC---CTTGCCGGTCTTGGC 41756 >seq803 Length=23017 Score = 123 bits (136), Expect = 3e-22 Identities = 244/355 (69%), Gaps = 12/355 (3%) Strand=Plus/Plus Query 1726689 GCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCGTTCT 1726748 ||| |||||| || |||||||| | ||| | || | ||| | |||||||||| Sbjct 15552 GCTTGGCGGCCACG---ACGGCGTCCACGGCCAGCTGCAGGTCGCCGCCCGTGCCGTTCT 15608 Query 1726749 TGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCG 1726808 |||||||||||| || | ||| |||| | ||||||||||| ||||| |||||| | Sbjct 15609 TGAAGCCGATGGGCATGGACAGCCCCGAGCAGAGCTCGCGGTGCAGCTGGCACTCGGTGG 15668 Query 1726809 TGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAA---GGGGCCACCAGAG 1726865 |||| ||||| | ||| ||||| ||| ||||| | | || | | ||| || | Sbjct 15669 TGCGGGCGCCGATGGCTCCCCAGCTCACGAGGTC--CGAGATGAACTGCGGCGACATGGT 15726 Query 1726866 GACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAACAGGC 1726925 | | ||| |||||| | || ||||| | ||| || || || || || ||| Sbjct 15727 GTC-GAGGAACTCGCAGCCCGCGGGCAGGCCGA--GC-TCGTTGATGGCGGCCAGCAGCT 15782 Query 1726926 GGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTGG 1726985 ||||| | | ||| || | | | | | | || ||||||||||| |||||| || Sbjct 15783 CGCGCGCCACGCGCAGCCCCTTGTTGATGTTGAAGGAGCCGTCGAGGTCCGGGTCGTTGA 15842 Query 1726986 CCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGAC 1727040 || |||||||| |||||||| ||||| ||||| |||| || |||||||||| Sbjct 15843 TGAGCCCCTTCCAGCCGACGGTGGTGCGGGGCTTCTCGAAGTACACGCGCATGAC 15897 >seq760 Length=24494 Score = 116 bits (128), Expect = 5e-20 Identities = 188/270 (70%), Gaps = 3/270 (1%) Strand=Plus/Plus Query 1572388 GCCAAAGCCGCCGCTGCCGCGCTCGGTGTCGTCCAGCGAGTCGACCCACTCGGGCTCGGG 1572447 ||| ||||||||| ||| ||| | ||||| || | | ||| ||| || | ||| || Sbjct 6993 GCCGAAGCCGCCGGCGCCACGCGCCGTGTCCTCGATCTCGTCCACCTCCTGGATCTCCGG 7052 Query 1572448 TTGGGCAATCTTTTCGATGAGCAACTGGGCGATGCGCGCCTCGCCCTGGACAACGTGGTC 1572507 | | ||||| |||| || | ||| || | ||| | ||| || ||| | ||| Sbjct 7053 GTACTCGATCTTCTCGAGGATGAGCTGCGCCACGCGGTCTCCGCGCTTGACGGGGAAGTC 7112 Query 1572508 GGCGTCGGTGTGGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATGAC 1572567 || | | ||||||||| || | |||||||| | |||||| |||||||| ||||| || Sbjct 7113 CTCGGCCGCGTGGTTGAACAGGATCACGCCCACGTTGCCGCGGTAGTCGGCGTCGATCAC 7172 Query 1572568 GCCTGCGCCGACGTCGATGCCCCT---GACGGCCAGGGACGAGCGCGGCGCCACGCGCCC 1572624 ||| ||||| ||||||| | | || || || |||||||||||||||||| | Sbjct 7173 GCCGGCGCCCGTGTCGATGAACTTCTTGAGCGCGAGTCCGGAGCGCGGCGCCACGCGCGC 7232 Query 1572625 ATAGTAGCCCGCGGGTATGGCCACGGCCAG 1572654 ||| |||| |||||| ||| | | |||| Sbjct 7233 GTAGCAGCCGTCGGGTACGGCGATGACCAG 7262 >seq1635 Length=13887 Score = 109 bits (120), Expect = 7e-18 Identities = 113/147 (77%), Gaps = 6/147 (4%) Strand=Plus/Minus Query 1592150 GACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAG 1592209 ||| |||||||| | |||||| ||| | ||||| || ||||||||| | || |||||| Sbjct 6753 GACATCGAGCAGGAGATCCTCTTCGAGCTCATCCTGGCGGCCAACTACATGGATATCAAG 6694 Query 1592210 CCTCTGCTCGATCTTGGGTGC---AAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCC 1592266 |||| || || | ||| ||| ||||||| |||||| ||||||||| ||||| Sbjct 6693 AGCTTGCTGGACCTGGCCTGCGCCAAG---GTGGCCAGCATGATTAAGGGCAAGACGCCC 6637 Query 1592267 GAGGAGATCCGCAAGACCTTTAACATC 1592293 ||||||||||| |||| ||||||||| Sbjct 6636 CAGGAGATCCGCGAGACGTTTAACATC 6610 >seq281 Length=41788 Score = 104 bits (114), Expect = 3e-16 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 ||||| ||| | ||||| |||||||||||| | ||||||||| | ||||| || || | Sbjct 34541 CTCTTCGAGCTCATCCTGGCCGCCAACTACATGGACATCAAGTCGCTGCTGGACCTGTCG 34482 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 |||| ||||| |||||||||||||||| ||||||||||||||||| || ||| Sbjct 34481 TGCACCAAGGTGGCGTGCATGATCAAGGGCAAGACGCCCGAGGAGATCCGCGCCACGTTT 34422 Query 1592288 AACATCA 1592294 ||||| Sbjct 34421 GGCATCA 34415 >seq921 Length=21488 Score = 95.1 bits (104), Expect = 1e-13 Identities = 158/223 (71%), Gaps = 13/223 (6%) Strand=Plus/Plus Query 1178268 TGCACCGCGACCTCAA--GTCGTCCAACCTGCTCGTCGACGACAACTTCACAATCAAGGT 1178325 ||||||| ||||| || ||| |||| |||| || ||| | ||||||| |||||| | Sbjct 14516 TGCACCGAGACCTGAAAAGTC--CCAATTTGCTGGTGGACAAGAACTTCAACATCAAGTT 14573 Query 1178326 GGCCGACTTTGGCTTTGCCCGCATCCGCGAGGACAA--TGC-GACGATGACGCGG---TG 1178379 | | |||||||| | || || || ||| | | ||| ||| |||||| | || Sbjct 14574 GTCGGACTTTGGACTGGCTCGGGTCA---AGGCCCACGTGCAGACCATGACGGGAAACTG 14630 Query 1178380 CGGCACGCCGGCGTGGACGGCGCCCGAGGTCCTGCGCGGCGAGCGCTACTCGGAAAAGGC 1178439 |||||| | ||||| ||| || ||||| ||| || | || ||| | || ||||| Sbjct 14631 CGGCACCGTGCAGTGGATGGCCCCTGAGGTGCTGGGCAACCAGAAGTACACTGAGAAGGC 14690 Query 1178440 CGACGTCTACTCGTTTGGCGTCGTCATGTGGGAGATCATCACG 1178482 |||||| | ||||| || ||||||| ||||||||| ||||| Sbjct 14691 CGACGTTTTTTCGTTCGGAATCGTCATTTGGGAGATCGTCACG 14733 >seq1230 Length=16736 Score = 89.7 bits (98), Expect = 6e-12 Identities = 144/200 (72%), Gaps = 9/200 (5%) Strand=Plus/Minus Query 1850345 CACCGCGACCTCAAGTCGTCCAACCTGCTGGTGACCGACGA-CTACTCGGTCAAGGTGGC 1850403 ||||| |||||||||||| ||| |||| ||||||| || |||| || ||||||| Sbjct 9501 CACCGTGACCTCAAGTCGCTCAATGTGCTCCTGACCGAAGACCTAC-AGGCCAAGGTGAG 9443 Query 1850404 CGACTTTGGCTT--TGCGCGCATCAAGGAGGCCAACGCGACCATGAC--CCGGTG-CGGC 1850458 |||||| ||| | || | |||| | ||| |||||||| ||||| ||| Sbjct 9442 CGACTTCGGCCTCAGTCGTGAGACAAG--CTTCGACGAAACCATGACGAGCGGTGTAGGC 9385 Query 1850459 ACGCCCTGCTGGACGGCGCCCGAGGTTATTCGCGGCGCGCGCTACTCGGAAAAGGTCGAC 1850518 ||| |||||| ||||| || ||| | ||||| | | | |||||||| |||| |||| Sbjct 9384 ACGTTACTCTGGACAGCGCCGGAAGTTCTGCGCGGAGAGAGGTACTCGGAGAAGGCCGAC 9325 Query 1850519 GTCTACTCTTTCGGCGTCGT 1850538 |||| |||||||| ||||| Sbjct 9324 ATCTATTCTTTCGGTGTCGT 9305 >seq2080 Length=10253 Score = 86.0 bits (94), Expect = 8e-11 Identities = 162/232 (70%), Gaps = 11/232 (5%) Strand=Plus/Minus Query 1347608 TCGTCCACCGCGACCTCAAGTCGCTCAACGTGCTCCTCGAC-GCCAAGTGGAACGCCAAG 1347666 || ||||||||||||||||||| |||||||| || |||||| ||| | | | |||||| Sbjct 2156 TCATCCACCGCGACCTCAAGTCTCTCAACGTCCTGCTCGACAGCCGACT-GCGTGCCAAG 2098 Query 1347667 ATCTCAGACTTTGGCCTCA--CG-CAGTGGTCGGCGCGCGCCCGCACGGCCGACGCCGTG 1347723 | ||||| || |||| || || | ||| || || | | | || ||| |||| Sbjct 2097 CTGAGCGACTTCGGGCTCAGTCGTGAGCGCTCGTCGGACGACACGATGACCAACGGCGTG 2038 Query 1347724 GGCACCGTGCACTGGTCGGCGCCCGAGGTGCTGTCGGCCGACGGCGACGCCAACCTCTTG 1347783 ||||| | | |||| ||||||||||| | ||| || |||||| ||| || Sbjct 2037 GGCACGCTACTCTGGACGGCGCCCGAGATCCTG-CG-----CGGCGAGGCCTACAGTGAA 1984 Query 1347784 CTGGCCGACGTCTACTCGTTTGGCATCGTCCTGTGGGAGGTGCTCACGCGCC 1347835 ||| ||||| ||||||| | |||||| |||| ||| || |||| ||| Sbjct 1983 AAGGCGGACGTGTACTCGTACGCCATCGTACTGTCCGAGTTGGACACGTGCC 1932 >seq20 Length=90637 Score = 86.0 bits (94), Expect = 8e-11 Identities = 166/239 (69%), Gaps = 12/239 (5%) Strand=Plus/Plus Query 1178244 TGCACGGGCGCGACCGGCCGATCGTGCACCGCGACCTCAAGTC---GTCCAACCTGCTCG 1178300 ||||| || ||||| |||| | ||||||||||||||||||| | || |||||| Sbjct 64619 TGCACTCGCTCGACCCGCCGGTGCTGCACCGCGACCTCAAGTCCAAGAACATCCTGCTGA 64678 Query 1178301 TCGACGACAACTTCACAATCAAGGTGGCCGACTTTGGCTTTGCCCGCATCCGCGAGGACA 1178360 | |||| || | | |||| | | ||||||||| | | || |||| |||| Sbjct 64679 CCTCCGAC--CTGGA-AGCCAAGCTCACGGACTTTGGCATCTCTCGAGAACGCGTCGACA 64735 Query 1178361 ATGCGACGATGACG--CGGTG-CGGCACGCCGGCGTGGACGGCGCCCGAGGTCCTGCGCG 1178417 | ||| |||||| || | ||||||| || |||| ||| |||||||| || | Sbjct 64736 A---GACCATGACGGCTGGCGTCGGCACGTCGCTTTGGATGGCTCCCGAGGTAATGATGG 64792 Query 1178418 GCGAGCGCTACTCGGAAAAGGCCGACGTCTACTCGTTTGGCGTCGTCATGTGGGAGATC 1178476 ||||| | ||| || ||||||||| ||| |||||| |||||||| | | |||| || Sbjct 64793 GCGAGAGGTACGACGACAAGGCCGACATCTTCTCGTTCGGCGTCGTGCTTTCGGAGCTC 64851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106438039348448