Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1922 271 1e-66 seq6666 210 3e-48 seq92 194 3e-43 seq850 190 3e-42 seq1082 183 5e-40 seq63 179 6e-39 seq1232 159 5e-33 seq2501 105 1e-16 seq1007 91.5 2e-12 seq552 91.5 2e-12 seq20 91.5 2e-12 seq370 89.7 8e-12 seq281 89.7 8e-12 >seq1922 Length=11443 Score = 271 bits (300), Expect = 1e-66 Identities = 355/483 (73%), Gaps = 10/483 (2%) Strand=Plus/Plus Query 2018916 CCGTGGATCGAAAAGTACCGCCCGACAGTGCTCGACGACATCGTGGGCAACGAGCACGCC 2018975 |||||| | || |||||||| ||| ||||| | ||| | ||||||||| || | Sbjct 6258 CCGTGGGTGGAGAAGTACCGGCCGCGCGTGCTGGCGGACGTGGTGGGCAACCGCGACACG 6317 Query 2018976 GTTGCCTACCTCAAGGCGCTGGCCGCCGACGG-CAACATGCCCAACCTCTTGCTGGCGGG 2019034 || || || |||| |||| || | ||| ||||||| | ||||| | ||| |||| Sbjct 6318 GTGGCGAGTCTGCAGGCCATGGC-GCAGGCGGGCAACATGACGAACCTGATCCTGTCGGG 6376 Query 2019035 CCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGC 2019094 |||||| ||||||||||||||||||||||| ||| |||||||||| ||| |||||| Sbjct 6377 CCCGCCGGGCACGGGCAAGACCACGAGCATTTTGTGTCTGGCGCGCGAGCTGCTGGGCG- 6435 Query 2019095 GGCCGCC-GACG-AGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTC 2019152 || || || | |||| ||||| || ||||| ||||| ||||| |||||| | ||| Sbjct 6436 -GCAGCATGAAGCAGGCGGTGCTGGAGCTCAACGCGTCGGACGACCGCGGCATCGACACG 6494 Query 2019153 GTGCGTAGAATCATCAAGCA--TCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGCC 2019210 ||||| || | |||||| || ||| | || | || ||||| || ||||||| Sbjct 6495 GTGCGCAGTAAGATCAAGATGTTCGCGCAGCAGAAGGTGACG--CTGCCCCCGGGCCGCC 6552 Query 2019211 ACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCC 2019270 ||||| | | ||||| || |||||||||| | | ||||| |||||||||||||| || | Sbjct 6553 ACAAGATCGTGATCCTGGACGAGGCCGACTCCATGACGTCCGCGGCCCAGCAGGCGCTGC 6612 Query 2019271 GATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGT 2019330 | |||||||| | | | | ||| ||||| || |||||||||||||||| ||| Sbjct 6613 GCCGCACCATGGAGATCTTCTCGGCCACCACGCGCTTCGCGCTGGCCTGCAACAACTCGA 6672 Query 2019331 CGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCG 2019390 | | | |||| ||| || |||||||||| ||||||||| |||||| |||| || ||| Sbjct 6673 CCAAGATCATTGAACCCATCCAGAGCCGCTGCGCCATCCTGCGCTACACGCGGCTGCCCG 6732 Query 2019391 ACG 2019393 ||| Sbjct 6733 ACG 6735 >seq6666 Length=2405 Score = 210 bits (232), Expect = 3e-48 Identities = 243/327 (74%), Gaps = 3/327 (1%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| || ||||||| ||||| |||| ||||| |||||||||||||||||| Sbjct 1733 CCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCAGGCATGAGGCCGCGCTTC 1792 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||||| ||||| ||||||||| ||||||||||| || || || || Sbjct 1793 TTGAGCCAGAAGATGGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCCACAGCTGCGAAC 1852 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | | || ||||| | | | || | | || | |||||| | |||||| Sbjct 1853 GCCAGCAGACGCTCCGGGTACGACGACACTCGCGG---GTCGCACCACTTGAGCGCCCAG 1909 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 | || || ||| |||| | || | ||| |||||||| || | |||||||||||||| Sbjct 1910 TGCGCTTTCTTCTTCACACACGGGATCGTATCGATGGCACGCAGCAGGTGGTCCTTCTCC 1969 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 || ||||||| ||| ||||| ||||| ||||| || ||||||||||||||| ||| Sbjct 1970 GTCGCATCCTTGATGTACGTGTCAATGAGCAGCGAATACACCTCTGAGTGGATGTTCTCG 2029 Query 794641 ATGGCGATCTGGAAGCCATAAAAGCAG 794667 |||||||||||||| || || |||||| Sbjct 2030 ATGGCGATCTGGAAACCGTAGAAGCAG 2056 Score = 181 bits (200), Expect = 2e-39 Identities = 235/318 (74%), Gaps = 14/318 (4%) Strand=Plus/Plus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 || |||||||||| ||||||||||||||| |||||||||||| |||||||||| ||| Sbjct 1412 ACACCCGCCTTGGAGTACTCGCCCACGCGCTTCTCGAAAAAGTTCGTCTTGCCCTGCAGC 1471 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGT-GCTTCTCG-CAC-CCG 794009 ||||||| |||||||| ||||||||| | | | || || | | ||| ||| || Sbjct 1472 GAGATCATGTCCATCCAGTCGAACGGGTT---CTTTACGTTGTAGATCTTCGACACACCC 1528 Query 794010 AGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTC 794069 ||||| ||||| |||||||| ||||| || ||||||||||||||||| | | |||| Sbjct 1529 AGCGAGTACAGCAGACGGTCGGCCACGAACTCGATGTACTGGCACATGAGCCCCGAGTTC 1588 Query 794070 ATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129 |||||||| ||| |||| || ||||| || | || ||||| | ||||||| || || Sbjct 1589 ATGCCGATCAGCTCCACAGGGAGCGAGTCACGCACGAACTCGTGCTCGATCGTCACCGCG 1648 Query 794130 TCGATGATGATCTGCCTGGGCACGTCGG----ACGACGGCTTGTCGACGAGCATCGTGTA 794185 ||| | ||||| | ||||| ||| || | |||||| || ||| | | ||| Sbjct 1649 TCGCGCACGATCT---CGTGCACG-CGGCTCTCCGGCAGCTTGTTCACCAGCTTGGAGTA 1704 Query 794186 GAGCAGGCAGGCAAAGTC 794203 | ||||| || ||||| Sbjct 1705 CATGAGGCACGCGAAGTC 1722 Score = 152 bits (168), Expect = 8e-31 Identities = 206/281 (73%), Gaps = 12/281 (4%) Strand=Plus/Plus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | |||||| || || || || || || ||||| |||||||||||| | Sbjct 2051 AAGCAGCGGGCCTCCGGCACCTGCACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTC 2110 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 ||||||||||||||||| ||||| ||||| || ||||||||||| ||| ||||||| | Sbjct 2111 ACGATGCCGTCGCTGGCAGCGAAGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTG 2170 Query 796261 TCGCTGAGCGAGACCCAGTGGACCGT---GTCG-GCGCCGAGGTCGACCTCCTCGGCGGT 796316 || | || |||||| || | |||| || || ||||| | ||||||||| || Sbjct 2171 TCCGTCAGGTTCGCCCAGT---CCTTGAGGTCGTGCACC-AGGTCCAGCTCCTCGGCCGT 2226 Query 796317 CCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGT--TGGTAGCGGATGGGG 796374 ||| || || ||||| ||||| |||||||||| ||| | ||| || | |||| ||| Sbjct 2227 CCAGAATGACGCCTCCGCCTTCTTGTACATCTGCCACA--CGTCGTGCTCCTGGATCGGG 2284 Query 796375 AACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 ||||| || || || || ||||||||| || | |||||| Sbjct 2285 AACAGCACGAACCGGTTCGGGTTCTCGACCAGGAACGGCTC 2325 >seq92 Length=63871 Score = 194 bits (214), Expect = 3e-43 Identities = 243/330 (74%), Gaps = 9/330 (3%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| || ||||||| ||||| |||| ||||| ||| |||||||||||||| Sbjct 49533 CCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCAGGCGTGAGGCCGCGCTTC 49474 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||| | ||||| ||||||||| ||||||||||| |||| || || Sbjct 49473 TTGAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCCACGGTTGCGAA- 49415 Query 794461 CCGACGAGC---CGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCC 794517 || | ||| ||||| | | | || | | || | |||||| | |||| Sbjct 49414 -CGTC-AGCACGCGCTCCGGGTACGACGACACTCGCGG---GTCGCACCACTTGAGCGCC 49360 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577 || | || || ||| |||| | || | ||| |||||||| || | |||||||||||| Sbjct 49359 CAGTGCGCTTTCTTCTTCACACACGGGATCGTATCGATGGCACGCAGCAGGTGGTCCTTC 49300 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 || || ||||||| ||| ||||| ||||| ||||| || ||||||||||||||| Sbjct 49299 TCCGTCGCATCCTTGATGTACGTGTCAATGAGCAGCGAATACACCTCTGAGTGGATGTTC 49240 Query 794638 TCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||||||||||||||||| || || |||||| Sbjct 49239 TCGATGGCGATCTGGAAACCGTAGAAGCAG 49210 Score = 156 bits (172), Expect = 7e-32 Identities = 204/278 (73%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | |||||| || || || || || || ||||| |||||||||||| | Sbjct 49215 AAGCAGCGGGCCTCCGGCACCTGCACTTCATTGCTGAAGTTCATGGCCAGGTTCTCGTTC 49156 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 ||||||||||||||||| ||||| ||||| || ||||||||||| ||| ||||||| | Sbjct 49155 ACGATGCCGTCGCTGGCAGCGAAGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTG 49096 Query 796261 TCGCTGAGCGAGACCCAGTGGACCGTGTCG-GCGCCGAGGTCGACCTCCTCGGCGGTCCA 796319 || | || |||||| | |||| || || ||||| | ||||||||| ||||| Sbjct 49095 TCCGTCAGGTTCGCCCAGTCCTTCAGGTCGTGCACC-AGGTCCAGCTCCTCGGCCGTCCA 49037 Query 796320 AAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGT--TGGTAGCGGATGGGGAAC 796377 || |||||||| || || |||||||||| ||| | ||| || | |||| |||||| Sbjct 49036 GAACGAGGCCTCCGCTTTCTTGTACATCTGCCACA--CGTCGTGCTCCTGGATCGGGAAC 48979 Query 796378 AGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 || || || || || ||||||||| || | |||||| Sbjct 48978 AGCACGAACCGGTTCGGGTTCTCGACCAGGAACGGCTC 48941 Score = 95.1 bits (104), Expect = 2e-13 Identities = 94/118 (80%), Gaps = 3/118 (3%) Strand=Plus/Minus Query 794004 CACCCGAGCGACGCA-AGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGC 794062 ||||| ||||| ||| ||||| |||||||| ||||| || ||||| ||||||||||| || Sbjct 49742 CACCC-AGCGA-GCACAGCAGACGGTCGGCCACGAACTCGATGTATTGGCACATGAGCGC 49685 Query 794063 GGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATC 794120 | |||||||||||| | |||| || ||||| || | || ||||| | ||||||| Sbjct 49684 CGAGTTCATGCCGATCGACTCCACAGGGAGCGAGTCACGCACGAACTCGTGCTCGATC 49627 Score = 93.3 bits (102), Expect = 7e-13 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 793896 CCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAG 793955 || || |||| |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 54274 CCGGCATTGGAGTACTCGCCCACGCGTTTCTCGAAAAAGTTGGTCTTGCCCTGCAGCGAG 54215 Query 793956 ATCAACTCCATCCACGGGAACGGGTT 793981 |||| |||||||| ||||||||| Sbjct 54214 ATCATGTCCATCCAATCGAACGGGTT 54189 >seq850 Length=22172 Score = 190 bits (210), Expect = 3e-42 Identities = 371/540 (69%), Gaps = 6/540 (1%) Strand=Plus/Minus Query 118548 AACTCTTGGCGCGCCACGGGGTCG-TCGCGAATGTCGCCCAGGAGGACGCGCGTGACCGT 118606 ||||| ||||| | |||||| || ||| | |||| || | | || |||||| || Sbjct 11285 AACTCGCTGCGCGTCCTCGGGTCGCTCTTGAA-GACGCCGAGCACGCTGCTCGTGACGGT 11227 Query 118607 GTTTGACCCGTTCTTGCGCACGCCGCGCATGCACACGCACATGTGGAGGCCCTCGAGCAC 118666 | | | ||| |||| |||||||||||| || ||||||||| | |||| | || Sbjct 11226 GCTGGCGCCGCTCTTCTCGACGCCGCGCATGACCATGCACATGTGTGTGGCCTCAATGAC 11167 Query 118667 GACGCCGACGCCGCGCGCGCCCG-TGACCTCGCTGATGCTCTCGGCGATCTGGCGCGTGA 118725 ||| | ||||| | | || | |||| | ||||| | ||||||||| |||| Sbjct 11166 CACGGCCACGCC-CTTGGGCTCAATGACGCCCATGATGGCGTTGGCGATCTGCTTGGTGA 11108 Query 118726 GCGCCTCCTGCACCTGGAAGCGGTCCGAGAGCATGTCGACGATGCGCGGGATCTTGCTCA 118785 | |||||||||||| | |||| ||||| | ||| || ||||| || |||||| | Sbjct 11107 GTCGCTCCTGCACCTGCAGGCGGCGCGAGAAGACCTCGCTGACGCGCGCGAGCTTGCTGA 11048 Query 118786 GGCCGATGATCCTGCCCGCGGGCAGGTAGCCCACGTGCGCCTTGCCGATAAAGGGCAGCA 118845 | || | | | |||| || | |||||| | |||| ||||||| | || |||| || Sbjct 11047 GCCCCAGCACCTTGCCGTTCGGGATGTAGCCGATGTGCACCTTGCCCGTGAACGGCACCA 10988 Query 118846 GATGGTGCTCGCACATGGAGAAAAAGTCAATGTCGCGCACGGTCACCATCTCGCCCGACG 118905 |||||||||||||||||| | | ||| |||||||||||| | ||||||||| || | Sbjct 10987 TGTGGTGCTCGCACATGGAGTACAGGTCGATGTCGCGCACGATGACCATCTCG-TCGTGG 10929 Query 118906 T-CTCGGCAAAGAGGGCGTCGCCGACGGCCTCGGCCAGGGTCAGGCGGTGGCCGCGCGTG 118964 | ||| | || | ||| ||| | | ||||||||| || ||| || ||| ||| Sbjct 10928 TCCTCCTCGAACACGGCCTCGTTCAGCACGTCGGCCAGGCTCTGGCCGTAGCCCTTGGTG 10869 Query 118965 CGCTCCACCATGGCCTTGGCCACGCGCATGGGCGTGTCCAAGAGGCCCTCGCGCGCCACG 119024 | || || |||||||||| |||||||||||| | || || ||||| ||||| | Sbjct 10868 TTGTACAGCAGCGCCTTGGCCATGCGCATGGGCGTCTTCACCAGCCCCTCACGCGCAGGG 10809 Query 119025 TCCTCGCCCAGACAGACCAGCATGGTCCTCGTGGCGTCGGCCATGCGCGCCATCTTGGCC 119084 ||||| || | || | |||| ||| || ||| | ||||| | || ||||||| Sbjct 10808 TCCTCTCCGATGCACTCGAGCAGCGTCGTCACGGCCGCCGCCATCTTCTGCAGCTTGGCC 10749 >seq1082 Length=18585 Score = 183 bits (202), Expect = 5e-40 Identities = 196/259 (76%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| |||||||| || ||||| || ||||||||| |||| || || || | | Sbjct 818 TGAACTTGGTCACGGCCTTCGTGCCCTCCGACACGGCGTGCTTGGCGAGCTCACCCGGGA 877 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || |||||||||||||||||||||||| || || ||| |||||| | Sbjct 878 GCATAAGACGCACGGCGGTCTGGATCTCGCGGCTGGAGAGCGTCGACTTCTTGTTGTAAC 937 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||| ||| ||||||||| | | ||||||| |||| |||||||||| |||||||||| Sbjct 938 GCGACAGCTTGCCGGCCTCCGAGGCGATGCGCTCGAAGATGTCGTTGATGAACGAGTTCA 997 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||| ||| ||||||| ||||||||||||||| |||||||||| Sbjct 998 TGATCGACATGCCGCGCTTGCTGATGCCCGTGTCGGGGTGCACCTGACGCAGCACCTTGT 1057 Query 1485710 AAACAAAGGACGAGTACGA 1485728 | | ||| ||||||||| Sbjct 1058 AGATGTAGGTCGAGTACGA 1076 >seq63 Length=69567 Score = 179 bits (198), Expect = 6e-39 Identities = 195/259 (75%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| |||||||| || ||||| || ||||||||| |||| || || || | | Sbjct 42059 TGAACTTGGTCACGGCCTTCGTGCCCTCCGACACGGCGTGCTTGGCGAGCTCTCCCGGGA 42000 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || |||||||| ||||||||||||||| || || ||| |||||| | Sbjct 41999 GCATGAGACGCACGGCCGTCTGGATCTCGCGGCTGGAGAGCGTCGACTTCTTGTTGTAAC 41940 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||| ||| ||||||||| | | ||||||| |||| |||||||||| |||||||||| Sbjct 41939 GCGACAGCTTGCCGGCCTCCGAGGCGATGCGCTCGAAGATGTCGTTGATGAACGAGTTCA 41880 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||| ||| ||||||| ||||||||||||||| |||||||||| Sbjct 41879 TGATCGACATGCCGCGCTTGCTGATGCCCGTGTCGGGGTGCACCTGACGCAGCACCTTGT 41820 Query 1485710 AAACAAAGGACGAGTACGA 1485728 | | ||| ||||||||| Sbjct 41819 AGATGTAGGTCGAGTACGA 41801 >seq1232 Length=16645 Score = 159 bits (176), Expect = 5e-33 Identities = 342/505 (68%), Gaps = 22/505 (4%) Strand=Plus/Plus Query 2069253 GTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGT 2069312 ||| ||||| |||| |||||||| ||| || || ||||| |||||||||||||| Sbjct 320 GTCCACGGTGAACTTGATGGCGTCGGCTTTCGGGCGTCCGCGCATGTAGTACATGCCGGT 379 Query 2069313 CTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCAT--TCGGG 2069370 |||||| || ||| |||||| |||||||||||||| | | || ||||| Sbjct 380 CTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATCGACGTGA--GCTTGCTGATGGTCGGG 437 Query 2069371 ACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGCC 2069430 |||| || || |||||||||||| |||||| | || | |||||||||||| | Sbjct 438 TCGGCGATGTGGATGTTGAGCGACTGACTCTGGCAAATGTACGCACCGCGGTCGGCCGAC 497 Query 2069431 ATGTCGATGGTCACGC-----GGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGA 2069485 | ||| | | ||| | ||| | ||||||||| |||||| || |||||| Sbjct 498 AGGTCCA--GCACCGCCTTCTGCTTG---ATCTCCCACACCGTCTTGTACTTCTCCTTGA 552 Query 2069486 GATGCGGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCC-CTGCGCTGCGATGAGG 2069544 || ||| | | | | | | | |||||| ||||| ||| | | | || Sbjct 553 CGTGGTCCGGGATCGCCTTGACGTT------CTGCACGGAGCCGCTGTCGTTCAA-GATC 605 Query 2069545 CGGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGG 2069604 ||| ||| | ||| |||||||| | |||| || | |||| || | ||||| | Sbjct 606 TGGTTGCGCACGTCCGGCGTCCAGATGCCGAGCTCGATCAGCTCCTTCATCAGGTACTTG 665 Query 2069605 TTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACC 2069664 ||||| | || || || || | ||||| ||||| |||| |||||| |||| | Sbjct 666 TTGACGATCGTGAACTCTCCAGCCAGCACTCGGCGGTTGTACATGTTGGACGTGTACGGC 725 Query 2069665 TCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACG 2069724 ||| | |||| |||| || |||||||| | ||| | ||||| |||||| | ||||| Sbjct 726 TCGATAGACTCGTTGTTTCCAAGGATCTGGGCCGTGGAAGCCGTCGGCATGGGGGCCACC 785 Query 2069725 AGCAGCGAGTTGCGCAGGCCGTACT 2069749 |||||||||||||| || |||| || Sbjct 786 AGCAGCGAGTTGCGGAGTCCGTGCT 810 Score = 132 bits (146), Expect = 8e-25 Identities = 211/303 (70%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || |||||| || || ||||| ||||||||||| || || |||||||| | | ||| || Sbjct 1712 GCCCTGGTCCACGTACCGCGCGGTGTCGTTAAACACCCGCAGCATGGGGATGATGCCATT 1771 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 |||| |||||| ||||| | |||| | | ||| || | |||||| | Sbjct 1772 GGACGAGCCGTTCGTGCCTCGGATGTAGCTGTTGGTGGCTCGGATGTTGTGCATACTGAT 1831 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 ||| || || |||||| || ||||| || || | || | ||| ||||| ||||| Sbjct 1832 GCCAATACCTCCGGCCCATTTAGAGATACAGGCACATTGCTTTAACGTGTCGTAAATGCC 1891 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 || || |||||| | | |||| |||| || ||||| ||||| ||| ||||||| ||| Sbjct 1892 TTCAATTGAGTCGTCTTGCATGGCCAATAGGAAGCAAGACGACAGTTGTGGGCGCGGCGT 1951 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTA 2073836 |||||| || || || || || || || |||| | || ||| ||||| |||||| Sbjct 1952 GCCGGCGTTAAAAAGTGTCGGGGTGGCATGCGTGAAAAACATTTGCGACATAAGCTCGTA 2011 Query 2073837 GGT 2073839 || Sbjct 2012 CGT 2014 Score = 120 bits (132), Expect = 5e-21 Identities = 266/403 (66%), Gaps = 4/403 (1%) Strand=Plus/Plus Query 2071612 GTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGC 2071671 ||||| ||||||| |||||| | ||||| | |||||||||| || ||| ||||| Sbjct 1314 GTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGTACAACATAAAGGGC 1373 Query 2071672 GCACCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAG 2071731 | |||||||| ||||| || | ||||| |||| | || | ||| | || Sbjct 1374 ACTCCCGTCTCAATCTGGGCGTCCAATATGGCGAACCACAGCTGCTGGGCGTTGATCGTC 1433 Query 2071732 GTCCTCGCGCGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTGG 2071791 | | ||||| |||| ||||||| || || || |||| | Sbjct 1434 TTGCGGGCGCGTCCCTCCGTCTCGTACTTTTCATAGAGGGCCTCGAATTCGTCGCCCCAG 1493 Query 2071792 CACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACC 2071851 ||||| | || || || |||||| |||||| |||| ||| | ||| | || Sbjct 1494 CACTCATAGAGTCCAGGGGCCTCGTTAGGGCAATAGAGACTCCACTTGCCATTGGCTTCC 1553 Query 2071852 ACGCGGCGCATAAACAGGTC--GCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGT 2071909 || | ||| ||||| || |||| ||| ||| |||| || || ||||| || |||| Sbjct 1554 ACCCTCTTCATGAACAGATCAGGCAC--CCAAAGGGCGTAGAACAGGTCGCGAGCGCGGT 1611 Query 2071910 TCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACG 2071969 | ||| |||||||||||||| ||||| | | |||| | || |||||||| | Sbjct 1612 GCAACTCGTTGCCGTGGTTCTTACGGAGGTCCAAGAACTCGAACACATCTGCGTGCCAAG 1671 Query 2071970 GCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 |||||| ||| ||| |||| |||||| |||||||| ||||| Sbjct 1672 GCTCCAAATAGATGGCGAAGGAGCCCTTACGCTTGCCTCCGCC 1714 >seq2501 Length=10718 Score = 105 bits (116), Expect = 1e-16 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 1703804 GCCATGGATGGCGCCGCCGCTTACGACCACCTCGACGTCGTCAAGTGGCTCCACGAGAAT 1703863 || |||||||||||||| ||| | | |||| || |||| ||||||||||| ||||| ||| Sbjct 8623 GCGATGGATGGCGCCGCGGCTAATGGCCACTTCTACGTTGTCAAGTGGCTGCACGAAAAT 8682 Query 1703864 CGCACCGAGGGATGCGCGACTGCCGCCATGGATAGCGC 1703901 ||| |||| || ||| | ||||||||||||||| |||| Sbjct 8683 CGCTCCGAAGGTTGCACCACTGCCGCCATGGATGGCGC 8720 Score = 93.3 bits (102), Expect = 7e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1703804 GCCATGGATGGCGCCGCCGCTTACGACCACCTCGACGTCGTCAAGTGGCTCCACGAGAAT 1703863 ||||||||||||||||| ||| | ||||||||||| || |||| ||||||||| |||||| Sbjct 8539 GCCATGGATGGCGCCGCTGCTAATGACCACCTCGAAGTTGTCAGGTGGCTCCATGAGAAT 8598 Query 1703864 CGCACCGAGGGATGCGCGACTGCCGCCATGGATAGCGCCGC 1703904 || | || || ||| | || || |||||| ||||||| Sbjct 8599 CGTTCTGAAGGCTGCACTACCAAAGCGATGGATGGCGCCGC 8639 Score = 87.8 bits (96), Expect = 3e-11 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 1703804 GCCATGGATGGCGCCGCCGCTTACGACCACCTCGACGTCGTCAAGTGGCTCCACGAGAAT 1703863 || |||||| ||||||| || | | |||| || |||| ||||||||||| ||| | ||| Sbjct 8287 GCGATGGATAGCGCCGCGACTAAGGGCCACTTCTACGTTGTCAAGTGGCTGCACAAAAAT 8346 Query 1703864 CGCACCGAGGGATGCGCGACTGCCGCCATGGATAGCGC 1703901 ||| |||| || ||| | | ||||||||||||| |||| Sbjct 8347 CGCTCCGAAGGCTGCACCATTGCCGCCATGGATGGCGC 8384 >seq1007 Length=39066 Score = 91.5 bits (100), Expect = 2e-12 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1703795 ACAACGGATGCCATGGATGGCGCCGCCGCTTACGACCACCTCGACGTCGTCAAGTGGCTC 1703854 ||| | | ||| |||||||| || || || ||| || |||||||| ||| |||||||| Sbjct 33745 ACAGCTGCTGCTATGGATGGAGCGGCAGCGAACGGGCATCTCGACGTTGTCCAGTGGCTC 33686 Query 1703855 CACGAGAATCGCACCGAGGGATGCGCGACTGCCGCCATGGATAGCGCCGC 1703904 ||||| || ||||| || || ||| ||||| | ||||||||| |||| || Sbjct 33685 CACGATAACCGCACAGAAGGCTGCACGACTACTGCCATGGATCGCGCTGC 33636 >seq552 Length=29147 Score = 91.5 bits (100), Expect = 2e-12 Identities = 96/126 (76%), Gaps = 3/126 (2%) Strand=Plus/Plus Query 1217491 CGACGATGACCCGGTGC---GGCACGCCGGCGTGGACGGCGCCCGAGATCCTGCGCGGCG 1217547 ||||||||||| | || |||||| |||||||| || || ||| | |||||||| | Sbjct 2566 CGACGATGACCGCGGGCATCGGCACGATGGCGTGGATCGCTCCGGAGGTGCTGCGCGGTG 2625 Query 1217548 AGCGCTACTCGGAAAAGGCCGACATCTACTCTTTCGGCATCGTCATGTGGGAGATCATCA 1217607 |||| ||| |||| | ||||||||||||||| |||||| | || ||| |||| | || Sbjct 2626 AGCGGTACACGGAGATGGCCGACATCTACTCGTTCGGCGTGATCCTGTCGGAGCTGGCCA 2685 Query 1217608 CGCGCA 1217613 || ||| Sbjct 2686 CGTGCA 2691 >seq20 Length=90637 Score = 91.5 bits (100), Expect = 2e-12 Identities = 163/232 (70%), Gaps = 16/232 (7%) Strand=Plus/Plus Query 1249580 TATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAG---AGCAGCAACCTG 1249636 || |||||| ||||||||||||| || | |||||||| |||||| | | || |||| Sbjct 64615 TACCTGCACTCGCTCGACCCGCCGGTGCTGCACCGCGACCTCAAGTCCAAGAACATCCTG 64674 Query 1249637 CTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGG--TCTCGCGCGCATCCGCG 1249694 ||| | |||| | | | |||| | | |||||||| |||| || | | |||| Sbjct 64675 CTGACCTCCGACCTG---GAAGCCAAGCTCACGGACTTTGGCATCTCTCGAGAA--CGCG 64729 Query 1249695 AGGACAATGCCACCATGACG--CGGTG-CGGCACGCCGGCGTGGACGGCGCCCGAGGTCA 1249751 ||||| ||||||||| || | ||||||| || |||| ||| |||||||| | Sbjct 64730 TCGACAA---GACCATGACGGCTGGCGTCGGCACGTCGCTTTGGATGGCTCCCGAGGTAA 64786 Query 1249752 TCCGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCATCGT 1249803 | |||||| | |||||||| |||||| ||| |||| ||||| |||| Sbjct 64787 TGATGGGCGAGAGGTACGACGACAAGGCCGACATCTTCTCGTTCGGCGTCGT 64838 >seq370 Length=35931 Score = 89.7 bits (98), Expect = 8e-12 Identities = 167/234 (71%), Gaps = 20/234 (9%) Strand=Plus/Minus Query 1249580 TATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAG---AGCAGCAACCTG 1249636 ||||||||| | |||||||| || | ||||| || |||||| | | || |||| Sbjct 8508 TATCTGCACTCCCTCGACCCCGTTGTACTACACCGAGACCTCAAGTCGATGAACATCCTG 8449 Query 1249637 CTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGG--TCTCGCGCGCATCCGCG 1249694 ||| ||| | ||| | | | || | |||||||||| |||||||| || | Sbjct 8448 CTG-TCGTC--CGACTGGGACGCGAAACTCACCGACTTTGGCGTCTCGCGC-CA-----G 8398 Query 1249695 AGGACAATGC-CACCATGACG--CGGTG-CGGCACGCCGGCG-TGGACGGCGCCCGAGGT 1249749 |||| || ||| |||||| ||| | |||||| | |||| |||| |||||||||||| Sbjct 8397 TGGACCGTGGACACGATGACGGCCGGCGTCGGCAC-CAGGCGGTGGATGGCGCCCGAGGT 8339 Query 1249750 CATCCGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCATCGT 1249803 ||| ||| ||||||||||| | |||||||| ||| |||| ||||| |||| Sbjct 8338 CATGATGGGCAAGCGCTACGACACGAGCGCCGACATCTTCTCGTTCGGCGTCGT 8285 >seq281 Length=41788 Score = 89.7 bits (98), Expect = 8e-12 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 ||||| ||| | ||||| |||||||||||| | ||||||||| | || || || || | Sbjct 34541 CTCTTCGAGCTCATCCTGGCCGCCAACTACATGGACATCAAGTCGCTGCTGGACCTGTCG 34482 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 |||| | ||||| | | |||||||||||| |||||||||| |||||| || ||| Sbjct 34481 TGCACCAAGGTGGCGTGCATGATCAAGGGCAAGACGCCCGAGGAGATCCGCGCCACGTTT 34422 Query 2035749 AACATCA 2035755 ||||| Sbjct 34421 GGCATCA 34415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915337535750816