Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1232 419 2e-112 seq6666 179 4e-40 seq570 165 8e-36 seq132 152 5e-32 seq884 134 1e-26 seq92 111 2e-19 >seq1232 Length=16645 Score = 419 bits (464), Expect = 2e-112 Identities = 1219/1850 (66%), Gaps = 64/1850 (3%) Strand=Plus/Plus Query 147953 GCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGACGA 148012 ||||| ||||||||||| |||||||| ||| | ||| |||||| ||||| ||||| Sbjct 359 GCGCATGTAGTACATGCCGGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATCGACG- 417 Query 148013 CATGAGCGTGTAC---GTCGGGTGCGGC-ACAAACAGATTAAACGACTGGCTCTGGTCAA 148068 ||||| || ||||||| |||| | | || | |||||| |||||| || Sbjct 418 --TGAGCTTGCTGATGGTCGGGT-CGGCGATGTGGATGTTGAGCGACTGACTCTGGCAAA 474 Query 148069 TGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTAT-CTTCATCTCCCAGGCC 148127 || |||| || ||||| || | || || | | ||| || | ||| |||||||| || Sbjct 475 TGTACGCACCGCGGTCGGCCGACAGGTCCAGCAC-CGCCTTCTGCTTGATCTCCCACACC 533 Query 148128 GTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGCGG 148187 ||||||||| | ||||| || || || || | | || | |||||| ||||||| | Sbjct 534 GTCTTGTACTTCTCCTTGACGTGGTCCGGGATCGCCTTGACGTTCTGCACGGAGCCGCTG 593 Query 148188 TGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCATCG 148247 | || ||||| ||||||| || ||| | | | |||||||||||| || | Sbjct 594 TCGTTCAAGATCTGGTTGCGCACGTCCGGCGTCCAGATGCCGAGCTCGATCAGCTCCTTC 653 Query 148248 ATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTG 148307 ||||| |||| || || | | ||||| || || ||||| || || |||| |||| Sbjct 654 ATCAGGTACTTGTTGACGATCGTGAACTCTCCAGCCAGCACTCGGCGGTTGTACATGTTG 713 Query 148308 CTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGC 148367 ||| |||| || | ||||||||||| || | ||||| || || | ||||| ||| Sbjct 714 GACGTGTACGGCTCGATAGACTCGTTGTTTCCAAGGATCTGGGCCGTGGAAGCCGTCGGC 773 Query 148368 ATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCC 148427 ||| || ||||||||||||||||| | ||| | || | | | ||| || | Sbjct 774 ATGGGGGCCACCAGCAGCGAGTTGCGGAGTCCGTGCTTGATCACGTCCTCCTTGAGCGTA 833 Query 148428 GCCCAGTCCCAGA---GCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCG 148484 ||||||| ||| | || |||||| || ||| |||||||||| |||| | ||||| Sbjct 834 GCCCAGTTCCACATACCCGACGACGGGGTGACGCCCCACATGTCGAACTGGAAGATGCCC 893 Query 148485 CGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAG 148544 ||||||||| ||||| | ||| |||||| ||| | || || | || || Sbjct 894 TTGCTAGCGGGCGAGCCCTGGAACGTCTCGTACGGGCCGAGTTCCTTGGCGATCTC-CAT 952 Query 148545 C-TCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGC 148603 | || ||| | ||| || |||| || |||||| || | | |||||||| | || Sbjct 953 CGACGTCTCCATGGCGGCGAAGTAGATGGTCTCGAAGATGTTCTTGTTGAGCTCCCGGGC 1012 Query 148604 CGACTCGCTTTCGTACGGCATA-CGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGC 148662 | |||||| ||| || || || || | | ||||||||| || |||||||| |||| Sbjct 1013 CTTCTCGCTCTCGAAC-GCGTAGTTCATGAGGATAAACGCGTCCGCGAGGCCCTGGACGC 1071 Query 148663 CCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC---GGATAGT 148719 | | || ||||| ||||| |||||||| |||||| ||||| | || |||| Sbjct 1072 CAATACCGATGGGGCGGTGACGCATGTTGGACTTGCGCGC---CTCGATCACGGGGTAGT 1128 Query 148720 GGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCA 148779 |||| |||||||| ||||| | ||||| |||||||| || | || | | | Sbjct 1129 AGTTGACGTCGATGACCTTGTTTAAGTTGCGGGTGACCACCTTCGTCA--CTTCATACAA 1186 Query 148780 ATTCAAAATCGTACTTG---------TCATCTACGATGCATCGGTTCACGGCGATAGAGG 148830 ||| | ||| ||| || || |||| | | || || || | ||| | Sbjct 1187 CTTC----TGGTAGTTGAAAACTCCTTCCTCCACGA-ACTTAGG--CAGCGCCACAGACG 1239 Query 148831 CTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGAT 148890 | | |||||||| ||| ||| ||||| | ||||||| | | ||| ||| | | Sbjct 1240 CCAAGTTGCACACAGCCACCTCGTCCGGCGACGTGTACTCCATCACCTCACAGCATAAGT 1299 Query 148891 TGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGT 148950 ||||| | |||| ||| | |||||| || || ||||| |||| ||||||||||| Sbjct 1300 TGCTGGAGCGGATCGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGT 1359 Query 148951 ACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGT 149007 ||| ||| | || | || || || | ||| | |||| ||| ||||| ||| | Sbjct 1360 ACAACATAAAGGGCACTCCCGTCTCAATCTGGGCGTCCAATATGGCGAACC---ACAGCT 1416 Query 149008 CCTGCGCG-CGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCGC 149066 ||| ||| | | | ||| | ||| |||||| |||||| ||| || | Sbjct 1417 GCTGGGCGTTGATCGTCTTGC-GGGCGCGTCCCTCCGTCTCGTACTTTTCATAGAGGGCC 1475 Query 149067 TCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGAC 149126 ||||| | ||||| |||| || | ||| || ||| || || ||||| ||| | Sbjct 1476 TCGAATTCGTCGCCCCAGCACTCATAGAGTCCAGGGGCCTCGTTAGGGCAATAGAGACTC 1535 Query 149127 CACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATG 149186 ||| ||| | || | ||| | |||||| |||||||| |||||||| || ||||| | Sbjct 1536 CACTTGCCATTGGCTTCCACCCTCTTCATGAACAGATCAGGCACCCAAAGGGCGTAGAAC 1595 Query 149187 AGGTCGC--GCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGT-TGAGCACGCTG 149243 ||||||| |||| |||| ||| ||| ||| || |||| || || | | Sbjct 1596 AGGTCGCGAGCGCGGTGCA--ACTCGTTGCCGTGGTTCTTACGGAGGTCCAAGAACTC-G 1652 Query 149244 AATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCG 149300 || | || |||||||| ||||| | || | |||| | |||||| |||||| ||| Sbjct 1653 AACACATCTGCGTGCCAAGGCTCCAAATAGATGGCGAAGGAGCCCTTACGCTTGCCTCCG 1712 Query 149301 CCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTG 149360 |||||||| |||| ||| | ||| ||||||||| || | ||| || |||||| || Sbjct 1713 CCCTGGTCCACGTACCGCGCGGTGTCGTTAAACACCCGCAGCATGGGGATGATGCCATTG 1772 Query 149361 GCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACG 149420 | | |||||| || | ||| ||| | ||||| | ||||||| ||| | Sbjct 1773 GACGAGCCGTTCGTGCCTCGGATGTAGCTGTTGGTGGCTCGGATGTTGTGCATACTGATG 1832 Query 149421 CCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCC 149480 || || || ||| | | || ||||| || || | | ||| ||| ||||| Sbjct 1833 CCAATACCTCCGGCCCATTTAGAGATACAGGCACATTGCTTTAACGTGTCGTAAATGCCT 1892 Query 149481 TCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTG 149540 || || |||| | ||||| || || ||||| || ||| ||| || ||||| Sbjct 1893 TCAATTGAGTCGTCTTGCATGGCCAATAGGAAGCAAGACGACAGTTGTGGGCGCGGCGTG 1952 Query 149541 CCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTAC 149600 ||||| || | || ||| |||| || || ||| | | || ||| | ||||||| Sbjct 1953 CCGGCGTTAAAAAGTGTCGGGGTGGCATGCGTGAAAAACATTTGCGACATAAGCTCGTAC 2012 Query 149601 GACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATA 149660 | ||| || || | |||| |||||||| | || |||||||| | ||| Sbjct 2013 GTCTCCAGGGCGGCCGCAATGTTGCTCTTGTGGATGCCAAGTGCCACGCGCATAATCATT 2072 Query 149661 TGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAA---GTAGCCGTTTTCTAGT 149717 |||||||| |||||| |||||||| || || | | || ||| ||| || || Sbjct 2073 TGCTGCGGACGCTCCACCACTTTG---CCGTTTACGCGGAAGAGGTACCCGCGCTCGAGA 2129 Query 149718 GTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGC 149767 || || | |||||||| | ||| |||||||| ||| ||||| ||||| Sbjct 2130 GTTTTAAACCCAAAGTAGTCGTAATCAAAGTCCCGGTCGTGGATGATGGC 2179 >seq6666 Length=2405 Score = 179 bits (198), Expect = 4e-40 Identities = 583/886 (66%), Gaps = 32/886 (4%) Strand=Plus/Plus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||||||||| ||||| ||||| |||||||| || ||||||| || ||| || ||| ||| Sbjct 1426 GTACTCGCCCACGCGCTTCTCGAAAAAGTTCGTCTTGCCCTGCAGCGAGATCATGTCCAT 1485 Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAAC-TGTACGAGCAGTC 120472 | ||||||||||| | |||| || |||| | |||| | |||| ||||| | Sbjct 1486 CCAGTCGAACGGGTTCTTTACGTTGTAGATCTTCGACACACCCAGCGAGTAC-AGCAGAC 1544 Query 120473 GGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCA 120532 |||| || || ||||| ||||||| ||||||| | || ||||||||| | || | ||| Sbjct 1545 GGTCGGCCACGAACTCGATGTACTGGCACATGAGCCCCGAGTTCATGCCGATCAGCTCCA 1604 Query 120533 CCGGCAACG-CCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCG 120591 | || | || ||| | ||||| | ||| || |||||| || | || || Sbjct 1605 CAGGGAGCGAGTCACG-CACGAACTCGTGCTCGATCGTCACCGCGTCGCGCACGATCTCG 1663 Query 120592 AGCATAGTGTGGC---CGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTAC---AGGCAC 120645 ||| | ||| | |||| || ||||| | || | | ||||| |||||| Sbjct 1664 TGCA---CGCGGCTCTCCGGCAGCT--TGTTC-ACCAGCTT---GGAGTACATGAGGCAC 1714 Query 120646 GCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCG 120705 || ||||||||||||| ||||||||| || ||||||||||| || ||||||| Sbjct 1715 GCGAAGTCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAGGCCA 1774 Query 120706 GGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACG 120765 ||||||| ||| | |||||| |||| |||| | || |||||| ||||| | | Sbjct 1775 GGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAACGAGCCCGAGAAGAAGATG 1834 Query 120766 CCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGC-TGTCGAT 120824 |||||||| || || || | || ||||| | ||| || | || || |||| Sbjct 1835 CCCTCCACAGCTGCGAACGCCAGCAGACGCTCCGGGTACGACGAC-ACTCGCGGGTCGCA 1893 Query 120825 CCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAG 120884 |||||| | ||||| | || || || ||| ||||| ||| |||| || ||| Sbjct 1894 CCACTTGAGCGCCCAGTGCGCTTTCTTCTTCACACACGGGATCGTATCGATGGCACGCAG 1953 Query 120885 CAGCATGTCGCGCTCGCCCTCCTCCGCAATCAGCTGATGGATGAGCAGATTGTACATTTC 120944 ||| ||| ||| | | ||| || | | |||||||| |||| || Sbjct 1954 CAGGTGGTCCTTCTCCGTCGCATCCTTGATGTACGTGTCAATGAGCAGCGAATACACCTC 2013 Query 120945 CGTGTGCACGCACTCGATCAGCACTTGCTGG---TTGTAAAAGTACTGCGCCTCCAGCTC 121001 | ||| | | |||||| || | |||| ||| ||| | | |||||| || | Sbjct 2014 TGAGTGGATGTTCTCGAT-GGCGAT--CTGGAAACCGTAGAAGCAGCGGGCCTCCGGCAC 2070 Query 121002 GGGCACCGC-CCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGGCGGCGG 121060 |||| | |||| | || | | ||||| |||||||| | |||| ||| | Sbjct 2071 CTGCACTTCATTGCTG-AAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCGCTGGCAG 2129 Query 121061 CGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTTGTGCGCAA 121120 ||||||| ||||||||||||||||| ||| ||||||| |||||| || || ||| Sbjct 2130 CGAAGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAG---GTTCGCCC 2186 Query 121121 AATCGTCATAGTCCTTGGACAGGTCGACCTCCTCCACCTTCCACATGCAATCGAGCGCCT 121180 | || | ||| | |||||| | |||||| || |||| | | | ||||| Sbjct 2187 AGTCCTTGAGGTCGTGCACCAGGTCCAGCTCCTCGGCCGTCCAGAATGACGCCTCCGCCT 2246 Query 121181 GTTTATAAGCCGTCCACAGGTCGTTGTGTTGAATCGGGAACAGTAC 121226 || || | ||||| ||||| | || ||||||||||| || Sbjct 2247 TCTTGTACATCTGCCACACGTCGTGCTCCTGGATCGGGAACAGCAC 2292 >seq570 Length=29657 Score = 165 bits (182), Expect = 8e-36 Identities = 157/198 (79%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || |||| ||| |||||| ||||||||||| Sbjct 28793 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACC-GTCCTCCAGCTGCTTGCC 28735 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| |||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct 28734 GGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTT 28675 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || ||| | ||||||||||||| |||| ||| ||||| ||||| || Sbjct 28674 CACGTTGTCGATCGAGTCCGACGGCTCCACGTCGAGTGTGATGGTCTTGCCCGTCAGCGT 28615 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 28614 CTTGACGAAAATCTGCAT 28597 Score = 161 bits (178), Expect = 1e-34 Identities = 156/198 (79%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || |||| ||| |||||| ||||||||||| Sbjct 29021 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACC-GTCCTCCAGCTGCTTGCC 28963 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| |||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct 28962 GGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTT 28903 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || ||| | ||||||||||||| |||| ||| ||||| ||||| || Sbjct 28902 CACGTTGTCGATCGAGTCCGACGGCTCCACGTCGAGCGTGATGGTCTTGCCCGTCAGCGT 28843 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 28842 CTTGACGAAGATCTGCAT 28825 Score = 161 bits (178), Expect = 1e-34 Identities = 156/198 (79%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || |||| ||| |||||| ||||||||||| Sbjct 29249 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACC-GTCCTCCAGCTGCTTGCC 29191 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| |||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct 29190 GGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTT 29131 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || ||| | ||||||||||||| |||| ||| ||||| ||||| || Sbjct 29130 CACGTTGTCGATCGAGTCCGACGGCTCCACGTCGAGCGTGATGGTCTTGCCCGTCAGCGT 29071 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 29070 CTTGACGAAGATCTGCAT 29053 Score = 161 bits (178), Expect = 1e-34 Identities = 156/198 (79%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || |||| ||| |||||| ||||||||||| Sbjct 29477 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGACC-GTCCTCCAGCTGCTTGCC 29419 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| |||||||||||||| |||||||| |||||||| ||||| ||||| Sbjct 29418 GGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCTGCTT 29359 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || ||| | ||||||||||||| |||| ||| ||||| ||||| || Sbjct 29358 CACGTTGTCGATCGAGTCCGACGGCTCCACGTCGAGCGTGATGGTCTTGCCCGTCAGCGT 29299 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 29298 CTTGACGAAGATCTGCAT 29281 >seq132 Length=78195 Score = 152 bits (168), Expect = 5e-32 Identities = 154/198 (78%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || |||| ||| |||||| ||||||||||| Sbjct 54527 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACC-GTCCTCAAGCTGCTTGCC 54469 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || |||||||| |||||||| |||||| ||||| Sbjct 54468 AGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 54409 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || ||| | ||||||||||| | |||| || ||||| ||||| || Sbjct 54408 GACGTTGTCGATCGAGTCCGACGGCTCCACGTCCAGCGTGATCGTCTTGCCCGTCAGCGT 54349 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 54348 CTTCACGAAGATCTGCAT 54331 Score = 149 bits (164), Expect = 6e-31 Identities = 154/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || |||| ||| |||||| ||||||||||| Sbjct 54755 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACC-GTCCTCAAGCTGCTTGCC 54697 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || |||||||| |||||||| |||||| ||||| Sbjct 54696 AGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 54637 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || ||| | ||||||||||| | |||| || ||||| ||||| || Sbjct 54636 GACGTTGTCGATCGAGTCCGACGGCTCCACGTCCAGCGTGATCGTCTTGCCCGTCAGCGT 54577 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 54576 CTTCACAAAGATCTGCATG 54558 Score = 149 bits (164), Expect = 6e-31 Identities = 154/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || |||| ||| |||||| ||||||||||| Sbjct 54983 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACC-GTCCTCAAGCTGCTTGCC 54925 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || |||||||| |||||||| |||||| ||||| Sbjct 54924 AGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 54865 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || ||| | ||||||||||| | |||| || ||||| ||||| || Sbjct 54864 GACGTTGTCGATCGAGTCCGACGGCTCCACGTCCAGCGTGATCGTCTTGCCCGTCAGCGT 54805 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 54804 CTTCACAAAGATCTGCATG 54786 Score = 149 bits (164), Expect = 6e-31 Identities = 154/199 (77%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || |||| ||| |||||| ||||||||||| Sbjct 55211 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTGCGACC-GTCCTCAAGCTGCTTGCC 55153 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || |||||||| |||||||| |||||| ||||| Sbjct 55152 AGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCTGCTT 55093 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || ||| | ||||||||||| | |||| || ||||| ||||| || Sbjct 55092 GACGTTGTCGATCGAGTCCGACGGCTCCACGTCCAGCGTGATCGTCTTGCCCGTCAGCGT 55033 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 55032 CTTCACAAAGATCTGCATG 55014 >seq884 Length=21595 Score = 134 bits (148), Expect = 1e-26 Identities = 124/157 (79%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||| ||| | || || ||||||||||| || |||||||| ||||| Sbjct 4828 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTT 4887 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| ||| || ||||||| | |||| |||||| ||||||||||| | |||| Sbjct 4888 GTCCTGGATTTTCTGCTTGACATTGTCAATGCTGTCGGACGGCTCCACGTCCAGCGTGAT 4947 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||| ||||| ||||| || || || || ||||||||| Sbjct 4948 GGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATG 4984 >seq92 Length=63871 Score = 111 bits (122), Expect = 2e-19 Identities = 426/656 (65%), Gaps = 21/656 (3%) Strand=Plus/Minus Query 120466 AGCAGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGC 120525 ||||| ||||| || || ||||| ||||| | ||||||| | || ||||||||| | | Sbjct 49728 AGCAGACGGTCGGCCACGAACTCGATGTATTGGCACATGAGCGCCGAGTTCATGCCGATC 49669 Query 120526 AACGCCACCGGCAACGCCG-ACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAA 120584 || |||| || | || ||| | ||||| | ||| || |||| | || | Sbjct 49668 GACTCCACAGGGAGCGAGTCACGC-ACGAACTCGTGCTCGATCGTCACCCCGTCGCGCAC 49610 Query 120585 CATGGCGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACA---G 120641 || || ||| | || |||| ||||| | | | | || |||||| | Sbjct 49609 GATCTCGTGCACGCGGCTCCCCGGCAGCTTGTTCACCA-----GCTTGG-AGTACATGAG 49556 Query 120642 GCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAG 120701 || ||| ||||||||||||| ||||||||| || ||||||||||| || |||| Sbjct 49555 GCTCGCGAAGTCCGTGTGCATGCCCTCGTCACGGCTGATCAGCTCGTTCGAGAAGCTCAG 49496 Query 120702 GCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAA 120761 ||| ||| ||| ||| | |||||| |||| || | | || |||||| ||||| Sbjct 49495 GCCAGGCGTGAGGCCGCGCTTCTTGAGCCAGAAGATCGAGCAGAACGAGCCCGAGAAGAA 49436 Query 120762 CACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGC-TGT 120820 | |||||||||| | || || | | || |||||| | ||| || | || || || Sbjct 49435 GATGCCCTCCACGGTTGCGAACGTCAGCACGCGCTCCGGGTACGACGAC-ACTCGCGGGT 49377 Query 120821 CGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGT 120880 || |||||| | ||||| | || || || ||| ||||| ||| |||| || Sbjct 49376 CGCACCACTTGAGCGCCCAGTGCGCTTTCTTCTTCACACACGGGATCGTATCGATGGCAC 49317 Query 120881 TCAGCAGCATGTCGCGCTCGCCCTCCTCCGCAATCAGCTGATGGATGAGCAGATTGTACA 120940 |||||| ||| ||| | | ||| || | | |||||||| |||| Sbjct 49316 GCAGCAGGTGGTCCTTCTCCGTCGCATCCTTGATGTACGTGTCAATGAGCAGCGAATACA 49257 Query 120941 TTTCCGTGTGCACGCACTCGATCAGCACTTGCTGG---TTGTAAAAGTACTGCGCCTCCA 120997 || | ||| | | |||||| || | |||| ||| ||| | | |||||| Sbjct 49256 CCTCTGAGTGGATGTTCTCGAT-GGCGAT--CTGGAAACCGTAGAAGCAGCGGGCCTCCG 49200 Query 120998 GCTCGGGCACCGC-CCGCTGCATGTACTCGATAAGGTTAATATTCACGATACTGTCGGCG 121056 || | |||| | |||| | || | | ||||| |||||||| | |||| | Sbjct 49199 GCACCTGCACTTCATTGCTG-AAGTTCATGGCCAGGTTCTCGTTCACGATGCCGTCGCTG 49141 Query 121057 GCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTT 121112 || |||||||| ||||||||||||||||| ||| ||||||| |||||| || || Sbjct 49140 GCAGCGAAGAAGGCCAGCACGTGCTTGATGAAGAACCGCTCGTTGTCCGTCAGGTT 49085 Score = 82.4 bits (90), Expect = 7e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||||||||| ||||||||||| |||||||| || ||||||| || ||| || ||| ||| Sbjct 54263 GTACTCGCCCACGCGTTTCTCGAAAAAGTTGGTCTTGCCCTGCAGCGAGATCATGTCCAT 54204 Query 120414 AAACTCGAACGGGTTGCTCGCGT 120436 | ||||||||||| |||||| Sbjct 54203 CCAATCGAACGGGTTCTTCGCGT 54181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483369170658560