Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq164 87.8 2e-12 >seq164 Length=50448 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/164 (73%), Gaps = 3/164 (2%) Strand=Plus/Minus Query 142570 GCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATGATGTTCCAA 142629 |||||||| || || || || | || ||||| || || |||||||||||| | | ||| Sbjct 4871 GCGTGGAATCCGGCGGATCTCAATGAGATGGCGCTCCCGCCGTGTCACATGTTCTGCCAG 4812 Query 142630 TTCCACGTCGACTCGAAGAAGCGTCTGTCATGCCAGCTGTATCAGCGTTCGGCAGACTGG 142689 ||| |||| | | || | | || |||| |||||| |||| ||||| ||||| ||| | Sbjct 4811 TTCTACGTGGCC--GACGGCGAGT-TGTCCTGCCAGATGTACCAGCGCTCGGCCGACATG 4755 Query 142690 TTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCAC 142733 || ||||| ||||||||||| || |||||| | || || Sbjct 4754 GGACTTGGCGTGCCGTTCAACATCGCCAGCTACGCGTTGCTTAC 4711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500445746685440