Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq760 109 5e-19 >seq760 Length=24494 Score = 109 bits (120), Expect = 5e-19 Identities = 134/181 (74%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 5340 CTCGCAGATGAGCTGCGCCACGCGGTCGCCTCGCCGCACCACGAAGGTCTCTTGGCCGAA 5399 |||| ||||||||||||||||||||| || ||| || |||| ||| ||||| Sbjct 7065 CTCGAGGATGAGCTGCGCCACGCGGTCTCCGCGCTTGACGGGGAAGTCCTC--GGCCGCG 7122 Query 5400 --GTTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCCCGCTCCC 5457 |||||| || | ||| |||| ||| || ||| |||| | ||| | ||||| || ||| Sbjct 7123 TGGTTGAACAGGATCACGCCCACGTTGCCGCGGTAGTCGGCGTCGATCACGCCGGCGCCC 7182 Query 5458 ACATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTAGCAGCCG 5517 || | ||| || || | |||||| ||||| | |||||||||||| ||||||||||| Sbjct 7183 GTGTCGATGAACTTCTTGAGCGCGAGTCCGGAGCGCGGCGCCACGCGCGCGTAGCAGCCG 7242 Query 5518 T 5518 | Sbjct 7243 T 7243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447763373763840