Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq6666 84.2 7e-11 >seq6666 Length=2405 Score = 84.2 bits (92), Expect = 7e-11 Identities = 100/135 (74%), Gaps = 3/135 (2%) Strand=Plus/Minus Query 443763 CTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACT 443822 ||||||||||||| | || ||||| || || |||| || |||| ||| ||||| || Sbjct 1810 CTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCTGGCCTGAGCTTCTCGAACGAGCT 1751 Query 443823 GATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAACACAT 443882 |||||| || |||||||| |||| |||||||| || || | ||| |||| | | Sbjct 1750 GATCAGCCGTGACGAGGGCATGCACACGGACTTCGCGTGCCTCATGTACTCCAAGC---T 1694 Query 443883 CGTGCACAAGCTGCC 443897 ||| |||||||||| Sbjct 1693 GGTGAACAAGCTGCC 1679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588162124858080