Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1232 453 1e-122 seq6666 239 5e-58 seq92 221 1e-52 seq685 93.3 5e-14 >seq1232 Length=16645 Score = 453 bits (502), Expect = 1e-122 Identities = 1117/1674 (67%), Gaps = 44/1674 (3%) Strand=Plus/Minus Query 19166 GAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAAC 19225 ||||| ||||| || ||| || | ||| |||||||| || || ||||| ||||| ||| Sbjct 2017 GAGACGTACGAGCTTATGTCGCAAATGTTTTTCACGCATGCCACCCCGACACTTTTTAAC 1958 Query 19226 GCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGC 19285 ||||| ||| ||| || ||||| || |||||| |||| ||| | || ||| Sbjct 1957 GCCGGCACGCCGCGCCCACAACTGTCGTCTTGCTTCCTATTGGCCATGCAAGACGACTCA 1898 Query 19286 ATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGT 19345 ||||| ||||| ||||| ||| | ||| | || || ||||| || ||| |||| ||| Sbjct 1897 ATTGAAGGCATTTACGACACGTTAAAGCAATGTGCCTGTATCTCTAAATGGGCCGGAGGT 1838 Query 19346 ATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACA-CGA-ATCAATGGGACGAAC 19402 || || ||| ||| | || ||||| | | ||| | | ||| || |||||| Sbjct 1837 ATTGGCATCAGTATGCAC-AACATCCGAGCCACCA--ACAGCTACATCCGAGGCACGAAC 1781 Query 19403 GGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTC 19462 || || | || ||| |||| ||||| || || || ||| |||| || ||||||| Sbjct 1780 GGCTCGTCCAATGGCATCATCCCCATGCTGCGGGTGTTTAACGACACCGCGCGGTACGTG 1721 Query 19463 AACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCG 19522 ||||||| || ||||| || |||||||| ||||||||||| | ||||| |||||||| Sbjct 1720 GACCAGGGCGGAGGCAAGCGTAAGGGCTCCTTCGCCATCTATTTGGAGCCTTGGCACGCA 1661 Query 19523 GACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGC 19582 || || | || ||| | || || || |||||| || ||||| | ||| |||| Sbjct 1660 GATGTGTTCGAGTTCTTGGACCTCCGTAAGAACCACGGCAACGAGTTGCACCGCGCTCGC 1601 Query 19583 GACCTCTTC-ACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAG---AAGGA 19638 ||||| ||| ||| |||| ||| | || || || |||||| ||| ||| || || | Sbjct 1600 GACCTGTTCTACGCCCTT-TGGGTGCCTGATCTGTTCATGAAGAGGGTGGAAGCCAATGG 1542 Query 19639 CGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGA 19698 | ||| ||| || ||||| |||| |||||| || || || ||||| Sbjct 1541 C-AAG--TGGAGTCTCTATTGCCCTAACGAGGCCCCTGGACTCTATGAGTGCTGGGGCGA 1485 Query 19699 GGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCG 19758 | ||| | | | || | |||| | |||| || | ||| | || Sbjct 1484 CGAATTCGAGGCCCTCTATGAAAAGTACGAGACGGAGGGACGCGCCCGCAAGACGATCAA 1425 Query 19759 GGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACAT 19818 |||| | | | ||| | | | | | |||| | ||||| || || | || Sbjct 1424 CGCCCAGCAGCTGTGGTTCGCCATATTGGACGCCCAGATTGAGACGGGAGTGCCCTTTAT 1365 Query 19819 GTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTC 19878 || ||||||||||| || ||| |||||| || ||||||||| ||||| ||||| || Sbjct 1364 GTTGTACAAGGACGCGGCCAACCGCAAGTCGAACCAGAAGAACCTCGGCACGATCCGCTC 1305 Query 19879 GTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAA 19938 |||| | || ||| | |||||| | |||||||||| || ||||| || Sbjct 1304 CAGCAACTTATGCTGTGAGGTGATGGAGTACACGTCGCCGGACGAGGTGGCTGTGTGCAA 1245 Query 19939 TCTGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATT 19998 ||||||| || ||||| | ||||| ||| ||| ||| || || Sbjct 1244 CTTGGCGTCTGTGGCGCTGCCTAAGTTCGTGGAGGAAGGAGTTTTCAACTACCAGAAGTT 1185 Query 19999 GTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA 20058 ||| || ||||| ||| ||||| || || | || |||||||| |||| || Sbjct 1184 GTATGAAGTGACGAAGGTGGTCACCCGCAACTTAAACAAGGTCATCGACGTCAACTACTA 1125 Query 20059 CCC---GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGT 20115 ||| || ||||||| |||||||| || ||||| ||||| || |||| || ||||| Sbjct 1124 CCCCGTGATCGAGGCG---CGCAAGTCCAACATGCGTCACCGCCCCATCGGTATTGGCGT 1068 Query 20116 CCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCC-AAGGCGC 20174 ||||||||| || |||| || || | | | | | ||||| || | ||||| | Sbjct 1067 CCAGGGCCTCGCGGACGCGTTTATCCTCATGAACTACGCGTTCGA-GAGCGAGAAGGCCC 1009 Query 20175 GCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCG 20234 | |||||||||||| |||||||||| || | ||| ||| ||| | | ||| | Sbjct 1008 GGGAGCTCAACAAGAACATCTTCGAGACCATCTACTTCGCCGCCATGGAGACGTCGATGG 949 Query 20235 AACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTA 20294 | ||||||| || ||||||||||||||||||| |||| |||||||| | |||| | Sbjct 948 AGATCGCCAAGGAACTCGGCCCGTACGAGACGTTCCAGGGCTCGCCCGCTAGCAAGGGCA 889 Query 20295 TCCTCCAGCCGGACATGTGGGGCGTCAC--------TGAGAATG-AGTTTTGGAGCGCCC 20345 || ||||| ||||||||||||||||| | | ||| | ||| | | Sbjct 888 TCTTCCAGTTCGACATGTGGGGCGTCACCCCGTCGTCGGGTATGTGGAACTGGGCTACGC 829 Query 20346 TCAAGGTTGA---GATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGC 20402 |||||| || ||||||| ||||| || ||||||||| |||| || || ||||||| Sbjct 828 TCAAGGAGGACGTGATCAAG---CACGGACTCCGCAACTCGCTGCTGGTGGCCCCCATGC 772 Query 20403 CGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCA 20462 |||| || || || ||||||||| | || ||||||||| || |||||||||||||| ||| Sbjct 771 CGACGGCTTCCACGGCCCAGATCCTTGGAAACAACGAGTCTATCGAGCCGTACACGTCCA 712 Query 20463 ACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCC 20522 |||| ||| || || ||||| || |||||| || || |||||| ||||| | Sbjct 711 ACATGTACAACCGCCGAGTGCTGGCTGGAGAGTTCACGATCGTCAACAAGTACCTGATGA 652 Query 20523 GCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAA--TGAAATTGTCCGAGC 20580 || || || ||| || ||| |||| | | || || ||| ||| Sbjct 651 AGGAGCTGATCGAGCTCGGCATCTGGACGCCGGACGTGCGCAACCAGATCTTGAACGA-- 594 Query 20581 CGGCGGGAGCGTCCAG---GCATTGGATATCCCCCAGAACCTCAAGGACATTTACAGGAC 20637 | |||| ||| ||| | || ||||| | || ||||||| | |||| ||| Sbjct 593 CAGCGGCTCCGTGCAGAACGTCAAGGCGATCCCGGACCACGTCAAGGAGAAGTACAAGAC 534 Query 20638 CGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACAT 20697 || ||||| ||| |||||| | | ||| || ||||||| ||||| || ||||| Sbjct 533 GGTGTGGGAGATCAAGCAGAAGGCGGTGCTGGACCTGTCGGCCGACCGCGGTGCGTACAT 474 Query 20698 CGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTC 20757 |||| ||||||||||| || ||| | | |||| | | ||||| | || Sbjct 473 TTGCCAGAGTCAGTCGCTCAACATCCACATCGCCGACCCGACCATCAGCAAGCTCACGTC 414 Query 20758 CATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCG 20811 ||||| | |||| |||| | |||||||||||||| ||||||||||| |||| Sbjct 413 GATGCACTTCTACGCCTGGAAGAAGGGGCTCAAGACCGGCATGTACTACATGCG 360 Score = 434 bits (480), Expect = 1e-116 Identities = 1144/1724 (66%), Gaps = 48/1724 (3%) Strand=Plus/Plus Query 78193 CGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGAC 78252 |||| ||||||||||| |||||||| ||||||||||| |||| | |||||| || Sbjct 360 CGCATGTAGTACATGCCGGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCATCGACGTG 419 Query 78253 AGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTAC 78312 |||||| | |||||| | ||| ||||||||||||||| |||| |||||| Sbjct 420 AGCTTGCTGATGGTCGGGTCGGCGATGTGGATGTTGAGCGACTGACTCTGGCAAATGTAC 479 Query 78313 GCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGG 78372 |||||||||||||||| || ||| | |||| ||| ||| |||||||| | ||| | Sbjct 480 GCACCGCGGTCGGCCGACAGGTCCAGCACCGCCTTCTGCTTGATCTCCCACACCGTCTTG 539 Query 78373 TAAATGGCCTTCAGCTCTTCCTGGATGTCCAG--CGCT-TGTACGCTCCCACCGGCTCGC 78429 || | |||| | | ||| |||| || || | || ||| || | | | | Sbjct 540 TACTTCTCCTTGACGTGGTCCGGGATCGCCTTGACGTTCTGCACGGAGCCGCTGTCGTTC 599 Query 78430 ACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCGGACCAGG 78489 | || | || | | || ||||| || || || ||| | |||| Sbjct 600 AAGATCTGGTTGCGCACGTCCGGCGTCCAGATGCCGAGCTCGATCAGCTCCTTCATCAGG 659 Query 78490 TGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTG 78549 | | ||| | || |||||| || ||||| ||||| ||| ||||||| |||| Sbjct 660 TACTTGTTGACGATCGTGAACTCTCCAGCCAGCACTCGGCGGTTGTACATGTTGGACGTG 719 Query 78550 TACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGT 78609 |||||||||| || ||||||||| || | ||||||||| || || || ||||||||||| Sbjct 720 TACGGCTCGATAGACTCGTTGTTTCCAAGGATCTGGGCCGTGGAAGCCGTCGGCATGGGG 779 Query 78610 GCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTT--------TAGGC 78661 || ||||| || || || || || || ||| |||||| || ||| ||| | Sbjct 780 GCCACCAGCAGCGAGTTGCGGAGTCCGTGC---TTGATCACGTCCTCCTTGAGCGTAGCC 836 Query 78662 C-GTCCCAAAATTCATTCGCCGCGATC---CCCCACATGTCCGGTTGAAGGATACCCTCG 78717 | || ||| | | || || | | ||||||||||| || | ||| |||| | Sbjct 837 CAGTTCCACATACCCGACGACGGGGTGACGCCCCACATGTCGAACTGGAAGATGCCCTTG 896 Query 78718 GACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCAT-GA 78776 || ||||| |||| |||||||||||| | || |||||||||| || ||| || Sbjct 897 CTAGCGGGCGAGCCCTGGAACGTCTCGTACGGGCCGAGTTCCTTGGCGATCTC-CATCGA 955 Query 78777 CTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTT 78836 | || ||| ||| ||| | | |||||||||| |||||||||||| || ||||| Sbjct 956 CGTCTCCATGGCGGCGAAGTAGATGGTCTCGAAGATGTTCTTGTTGAGCTCCCGGGCCTT 1015 Query 78837 GGTCTCG---TCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCC 78893 |||| ||||||| | | | || || | || || |||||||||||||| Sbjct 1016 ---CTCGCTCTCGAACGCGTAGTTCATGAGGATAAACGCGTCCGCGAGGCCCTGGACGCC 1072 Query 78894 GATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTC---GGGTAAAA 78950 ||| |||| || ||||| ||||||||| ||| || ||||||| || ||||| | Sbjct 1073 AATACCGATGGGGCGGTGACGCATGTTGGACTTGCG---CGCCTCGATCACGGGGTAGTA 1129 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 ||| |||||||| ||| | ||| || ||||| ||| ||||| || ||||| || Sbjct 1130 GTTGACGTCGATGACCTTGTTTAAGTTGCGGGTGACCACCTTCGTCACTTCATACAACTT 1189 Query 79011 GGCGAAATC-AAAATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGC 79069 | | | |||| ||||| | ||| | || || || || |||| ||||| Sbjct 1190 CTGGTAGTTGAAAACTCCTTCCTCC-ACGAACTTAGGCAGCGCCACAGACGCCAAGTTGC 1248 Query 79070 ACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACT 79129 |||| ||| ||||||||| | ||| || | || ||| || || || Sbjct 1249 ACACAGCCACCTCGTCCGGCGACGTGTACTCCATCACCTCACAGCATAAGTTGCTGGAGC 1308 Query 79130 TGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGT 79189 ||| ||||||| |||||||||||| ||| ||| ||||||||||| |||| Sbjct 1309 GGATCGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCCGCGTCCTTGTACAACATAA 1368 Query 79190 ACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA 79249 | ||| || ||||||| ||| | | | | || ||| | | | |||| || Sbjct 1369 AGGGCACTCCCGTCTCAATCTGGGCGTCCAATATGGCGAACCACAGCTGCTGGGCGTTGA 1428 Query 79250 CAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCC 79309 ||| | || |||| | ||||| | || | | | ||| | || | Sbjct 1429 TCGTCTTGCGGGCGCGTCCCTCCGTCTCGTACTTTTCATAGAGGGCCTCGAATTCGTCGC 1488 Query 79310 CATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCT 79369 | || || || || ||| ||||| ||||| || ||| || | | | Sbjct 1489 CCCAGCACTCATAGAGTCCAGGGGCCTCGTTAGGGCAATAGAGACTCCA---CTTGCCAT 1545 Query 79370 TC---TCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGC 79426 | || ||| ||| |||||| || || || | ||| ||||| ||| |||||||| Sbjct 1546 TGGCTTCCACCCTCTTCATGAACAGATCAGGCACCCAAAGGGCGTAGAACAGGTCGCGAG 1605 Query 79427 AACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGT 79486 || | ||||| ||| |||||| ||| || || | || || | | || |||| Sbjct 1606 CGCGGTGCAACTCGTTGCCGTGGTTCTTACGGAGGTCCAAGAACTCGAACACATCTGCGT 1665 Query 79487 GCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGT 79546 |||| ||||||| |||||||||||| || ||||| |||||||| |||||||||| |||| Sbjct 1666 GCCAAGGCTCCAAATAGATGGCGAAGGAGCCCTTACGCTTGCCTCCGCCCTGGTCCACGT 1725 Query 79547 ACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGG-CGACGCCGTTC 79605 |||| || |||| ||| || || || |||||||| | |||||| | || ||| ||||||| Sbjct 1726 ACCGCGCGGTGTCGTTAAACACCCGCAGCATGGGGATGATGCCATTGGACGA-GCCGTTC 1784 Query 79606 GTCCCGTTGAT-TCG-TGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCC 79662 || || ||| | | ||| | | || || ||||| | ||| ||| || || || Sbjct 1785 GTGCCTCGGATGTAGCTGT--TGGTGGCTCGGATGTT-GTGCATACTGATGCCAATACCT 1841 Query 79663 CCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAG 79722 |||| ||| || ||||| || || | ||| | ||| ||||| ||||| || || ||| Sbjct 1842 CCGGCCCATTTAGAGATACAGGCACATTGCTTTAACGTGTCGTAAATGCCTTCAATTGAG 1901 Query 79723 TCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTG 79782 ||||| | ||| || | |||||||| ||||| |||||| ||| |||||||| Sbjct 1902 TCGTCTTGCATGGCCAATAGGAAGCAAGACGACAGTTGTGGGCGCGGCGTGCCGGCGTTA 1961 Query 79783 AAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTG 79842 || || ||||| || || |||||||| ||| |||| ||| || |||||||||||| | Sbjct 1962 AAAAGTGTCGGGGTGGCATGCGTGAAAAACATTTGCGACATAAGCTCGTACGTCTCCAGG 2021 Query 79843 ACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886 || || | || | ||||||||| | || |||||||| Sbjct 2022 GCGGCCGCAATGTTGCTCTTGTGGATGCCAAGTGCCACGCGCAT 2065 >seq6666 Length=2405 Score = 239 bits (264), Expect = 5e-58 Identities = 572/851 (67%), Gaps = 33/851 (4%) Strand=Plus/Minus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| ||||| ||| | ||||||||| | | ||||||| | ||||| | |||| Sbjct 2255 TGTACAAGAAGGCGGAGGCGTCATTCTGGACGGCCGAGGAGCTGGACCTGGTGCACGACC 2196 Query 59653 TGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCT 59712 | ||||| |||| || || | || |||||| | ||||||||| || ||||||| Sbjct 2195 TCAAGGACTGGGCGAACCTGACGGACAACGAGCGGTTCTTCATCAAGCACGTGCTGGCCT 2136 Query 59713 TCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATG 59772 ||||||| || || || || || |||| || || | | ||||||||| ||| || | Sbjct 2135 TCTTCGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCCATGAACTTCAGCAATGAAG 2076 Query 59773 TCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCAC 59831 | ||| | | |||||||| | ||||||| | ||| ||| || |||| |||||| Sbjct 2075 TGCAGGTGCCGGAGGCCCGCTGCTTCTACGGTTTCCAGATCGC-CATCGAGAACATCCAC 2017 Query 59832 TCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGT 59891 || ||| ||| ||||| | || || | || |||||||| || ||||||| Sbjct 2016 TCAGAGGTGTATTCGCTGCTCATTGACACGTACATCAAGGATGCGACGGAGAAGGACCAC 1957 Query 59892 CTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAG 59951 ||| | |||||||| || ||| ||| || || | ||||| | ||||| | || Sbjct 1956 CTGCTGCGTGCCATCGATACGATCCCGTGTGTGAAGAAGAAAGCGCACTGGGCGCTCAAG 1897 Query 59952 TGGATGAGTCCTG-GAGCATCATT-TGCAC--AACGTCTCATAGCTTTTGCATGCGTGGA 60007 ||| || | || | ||| || | | | | | ||||| | || || ||| ||||| Sbjct 1896 TGG-TGCGACCCGCGAGTGTCGTCGTACCCGGAGCGTCTGCTGGCGTTCGCAGCTGTGGA 1838 Query 60008 AGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCAT 60067 || ||||||||||| ||||||||||| | || ||||||||||| ||||| |||||||| Sbjct 1837 GGGCATCTTCTTCTCGGGCTCGTTCTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCAT 1778 Query 60068 GCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTT 60127 ||| |||||||| ||||| ||||||||||| ||| ||||||||| | || ||| || Sbjct 1777 GCCTGGCCTGAGCTTCTCGAACGAGCTGATCAGCCGTGACGAGGGCATGCACACGGACTT 1718 Query 60128 TGCAGTGACGC-TCTATTCACACCTATTGGAAAAATGCCCTTCCAAGGATA------TTC 60180 || ||| | | | || || | || || | || || || ||| | | | Sbjct 1717 CGC-GTGCCTCATGTACTCCAAGCTGGTGAACAA----GCTGCC--GGAGAGCCGCGTGC 1665 Query 60181 ACAAGATTGTTCAGTGGGCTTGTGAAG-TGGAGAGCGAGTTCATCACAGAAGCGCTTCCA 60239 || |||| || | | | |||| | | ||| ||||||| | || |||| || Sbjct 1664 ACGAGATCGTGC-GCGACGCGGTGACGATCGAGCACGAGTTCGTGCGTGACTCGCTCCCT 1606 Query 60240 TGCAAACTCATAGGTATGGACGCTGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGAC 60299 | || || || ||| || | || ||| |||||||| |||| || || ||| Sbjct 1605 GTGGAGCTGATCGGCATGAACTCGGGGCTCATGTGCCAGTACATCGAGTTCGTGGCCGAC 1546 Query 60300 CGCCTCATG-----GCCCAGTTTGGAGAAGGACCAATTTACGGCGTGAATAACCCTTTCG 60354 || || || || || || |||| || ||| ||| || ||||| |||| Sbjct 1545 CGTCTGCTGTACTCGCTGGGTGTGTCGAAG-----ATCTACAACGTAAAGAACCCGTTCG 1491 Query 60355 ACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGG 60414 |||||||||| | |||||| || | || ||||| ||||| || |||||||| || || | Sbjct 1490 ACTGGATGGACATGATCTCGCTGCAGGGCAAGACGAACTTTTTCGAGAAGCGCGTGGGCG 1431 Query 60415 ATTATTCAAAG 60425 | || || ||| Sbjct 1430 AGTACTCCAAG 1420 >seq92 Length=63871 Score = 221 bits (244), Expect = 1e-52 Identities = 368/526 (70%), Gaps = 7/526 (1%) Strand=Plus/Plus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| ||||||||| | || |||||| | | ||||||| | ||||| | |||| Sbjct 49011 TGTACAAGAAAGCGGAGGCCTCGTTCTGGACGGCCGAGGAGCTGGACCTGGTGCACGACC 49070 Query 59653 TGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCT 59712 ||||||| |||| || || | || |||||| | ||||||||| || ||||||| Sbjct 49071 TGAAGGACTGGGCGAACCTGACGGACAACGAGCGGTTCTTCATCAAGCACGTGCTGGCCT 49130 Query 59713 TCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATG 59772 ||||||| || || || || || |||| || || | | ||||||||| ||| || | Sbjct 49131 TCTTCGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCCATGAACTTCAGCAATGAAG 49190 Query 59773 TCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCAC 59831 | ||| | | |||||||| | ||||||| | ||| ||| || |||| |||||| Sbjct 49191 TGCAGGTGCCGGAGGCCCGCTGCTTCTACGGTTTCCAGATCG-CCATCGAGAACATCCAC 49249 Query 59832 TCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGT 59891 || ||| ||| ||||| | || || | || |||||||| || ||||||| Sbjct 49250 TCAGAGGTGTATTCGCTGCTCATTGACACGTACATCAAGGATGCGACGGAGAAGGACCAC 49309 Query 59892 CTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAG 59951 ||| | |||||||| || ||| ||| || || | ||||| | ||||| | || Sbjct 49310 CTGCTGCGTGCCATCGATACGATCCCGTGTGTGAAGAAGAAAGCGCACTGGGCGCTCAAG 49369 Query 59952 TGGATGAGTCCTG-GAG---CATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGA 60007 ||| || | || | ||| | || | | | || | | | || ||| |||||| Sbjct 49370 TGG-TGCGACCCGCGAGTGTCGTCGTACCCGGAGCGCGTGCTGACGTTCGCAACCGTGGA 49428 Query 60008 AGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCAT 60067 || ||||||||||| ||||||||||| | || ||||||||||| ||||| ||||||| Sbjct 49429 GGGCATCTTCTTCTCGGGCTCGTTCTGCTCGATCTTCTGGCTCAAGAAGCGCGGCCTCAC 49488 Query 60068 GCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 ||| |||||||| ||||| ||||||||||| ||| ||||||||| Sbjct 49489 GCCTGGCCTGAGCTTCTCGAACGAGCTGATCAGCCGTGACGAGGGC 49534 >seq685 Length=25884 Score = 93.3 bits (102), Expect = 5e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 159479 CGCTTCTGGGGGTCGCTCAGGACCTCATAGGCCTCCTGGACTTTCTTGAACTTCTCGGCG 159538 ||||||| |||||| ||| ||||| |||||| || || ||||||| ||| | | Sbjct 3119 CGCTTCTCCGGGTCGGACAGCACCTCGTAGGCCACCGTGATGGTCTTGAAGAGCTCCGGG 3178 Query 159539 TCACCGCCCTTGTCGGGGTGGTGCTCGCGGGCAAGTTTGCGGTACGCCTTTTTGATGTCG 159598 || ||||||||||| ||||||| || | | || || |||||||| ||||| ||||| ||| Sbjct 3179 TCGCCGCCCTTGTCCGGGTGGTTCTTGAGCGCCAGCTTGCGGTAGGCCTTCTTGATCTCG 3238 Query 159599 G 159599 | Sbjct 3239 G 3239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548466217551360