Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20fragariae_20[genbank_20GCA_5F002025845.1_202017-03- 14] 8,544 sequences; 76,969,664 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1232 295 8e-75 seq570 138 1e-27 seq132 134 2e-26 seq884 132 5e-26 seq448 127 2e-24 seq6666 118 1e-21 seq92 100 3e-16 seq347 87.8 2e-12 >seq1232 Length=16645 Score = 295 bits (326), Expect = 8e-75 Identities = 950/1453 (65%), Gaps = 46/1453 (3%) Strand=Plus/Plus Query 80036 GCGTCCGCAGAT--AGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCAT 80093 |||||||| || |||||||||| |||||||| |||||||||||| |||| | |||||| Sbjct 353 GCGTCCGCGCATGTAGTACATGCCGGTCTTGAGCCCCTTCTTCCAGGCGTAGAAGTGCAT 412 Query 80094 AGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACA 80153 || ||||||| | || |||| | ||| |||||| || |||||| ||| || Sbjct 413 CGACGTGAGCTTGCTGATGGTCGGGTCGGCGATGTGGATGTTGAGCGACTGACTCTGGCA 472 Query 80154 GATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATAC 80213 ||| | || || || || |||| || || | | | ||| || || ||||| || Sbjct 473 AATGTACGCACCGCGGTCGGCCGACAGGTCCAGCACCGCCTTCTGCTTGATCTCCCACAC 532 Query 80214 -----TGTACGATACACCTTACGAAGCTCCTCTGGAATGTCCA-GA--TTTTGCACACTG 80265 ||||| | | |||| || | | || || || || || || ||||| | Sbjct 533 CGTCTTGTAC--TTCTCCTT--GACG-TGGTCCGGGATCGCCTTGACGTTCTGCACGGAG 587 Query 80266 CCACCGTCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGA 80325 || | ||| || | || || || || || | |||||||| || |||| | ||| Sbjct 588 CCGCTGTCGTTCAAGATCTGGTTGCGCACGTCCGGCGTCCAGATGCCGAGCTCGATCAGC 647 Query 80326 TCTTTCACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATAC 80385 || |||| |||| |||||| | || |||||||| || || || || ||| Sbjct 648 TCCTTCATCAGGTACTTGTTGACGATCGTGAACTCTCCAGCCAGCACTCGGCGGTTGTAC 707 Query 80386 AGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCC 80445 | ||| | ||||| ||||| | | |||||||||||| |||||||| |||||| ||| Sbjct 708 ATGTTGGACGTGTACGGCTCGATAGACTCGTTGTTTCCAAGGATCTGGGCCGTGGAAGCC 767 Query 80446 GTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTC---- 80501 |||||||| ||| | |||| ||| || || || || |||||||| | | ||||| Sbjct 768 GTCGGCATGGGGGCCACCAGCAGCGAGTTGCGGAGTCCGTGCTTGATCACGTCCTCCTTG 827 Query 80502 -GCGCAAATCTGA-CCAAAAATCAACCCCAACGCTGTGAC--CCCACATGTCGTGCTGCA 80557 ||| | | | ||| | | | | | ||| ||||| ||||||||||| ||| | Sbjct 828 AGCGTAGCCCAGTTCCACATACC--CGACGACGGGGTGACGCCCCACATGTCGAACTGGA 885 Query 80558 AGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCA 80617 ||||||||| || || || ||| |||||||||||||||||| |||||| | Sbjct 886 AGATGCCCTTGCTAGCGGGCGAGCCCTGGAACGTCTCGTACGGGCCGAGTTCCTTGGCGA 945 Query 80618 GCTC---ACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCA 80674 ||| ||| |||||| ||| ||| || ||| ||| |||| | |||||| | Sbjct 946 TCTCCATCGACGTCTCCAT---GGCGGCGAAGTAGATGGTCTCGAAGATGTTCTTGTTGA 1002 Query 80675 CACCGCGCGCC-TGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGG 80733 | || ||| | | | || ||||||| || ||| | || ||| |||| || ||| Sbjct 1003 GCTCCCGGGCCTTCTCGCTC-TCGAACGCGTAGTTCATGAGGATAAACGCGTCCGCGAGG 1061 Query 80734 CCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA-TCGCTCGGCCTCCGGAAT 80792 ||||| ||||| || |||| |||||||| ||| |||| || | || | ||||| | Sbjct 1062 CCCTGGACGCCAATACCGATGGGGCGGTGACGCATGTTGGACTTGCGC-GCCTCGATCAC 1120 Query 80793 TGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATC 80852 ||||| |||| |||||||| ||| | |||||| || || ||| || || || Sbjct 1121 GGGGTAGTAGTTGACGTCGATGACCTTGTTTAAGTTGCGGGTGACCACCTTCGTCACTTC 1180 Query 80853 ATGAAGTTTCTGAAAGTCG--AATTGGTTCCCCTTCACAAATGCCGGAAGGCTCAGGGAC 80910 || | ||||| ||| | || | || ||| ||| || || || || ||| Sbjct 1181 ATACAACTTCTGGTAGTTGAAAACTCCTT--CCTCCACGAACTTAGGCAGCGCCACAGAC 1238 Query 80911 GCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAA 80970 |||| |||||||| |||||||| || | || |||| | | || ||| || Sbjct 1239 GCCAAGTTGCACACAGCCACCTCGTCCGGCGACGTGTACTCCATCACCTCACAGCATAAG 1298 Query 80971 TTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTG 81030 || || || || || ||||| |||||||| |||||| |||| ||||||||| Sbjct 1299 TTGCTGGAGCGGATCGTGCCGAGGTTCTTCTGGTTCGACTTGCGGTTGGCCGCGTCCTTG 1358 Query 81031 TAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCG 81090 || |||| | || || ||||| | ||| | | | |||||| ||| | || Sbjct 1359 TACAACATAAAGGGCACTCCCGTCTCAATCTGGGCGTCCAATATGGCGAACCACAGCTGC 1418 Query 81091 CGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCG 81150 | || |||| | ||||||| || || | | | ||||| | || | ||| Sbjct 1419 TGGGCGTTGATCGTCTTGCGGGCGCGTCCCTCCGTCTCGTACTTTTCATAGAGGGCCTCG 1478 Query 81151 AACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAG 81210 || | | | || ||| ||| | ||| |||||||||||| || ||| Sbjct 1479 AATTCGTCGCCCCAGCACTCATAGAGTCCAGGGGCCTCGTTAGGGCAATAGAGACTCCAC 1538 Query 81211 TCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGG 81270 | | | | || || ||||||||| ||||| | ||| |||||| ||||||| Sbjct 1539 TTGCCATTGGCTTCCACCCTCTTCATGAACAGATCAGGCACCCAAAGGGCGTAGAACAGG 1598 Query 81271 TCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGA 81328 ||||| |||||| | ||| | || ||||| || | || | || || | | Sbjct 1599 TCGCG--AGCGCGGTGCAACTCGTTGCCGTGGTTCTTACGGAGGTCCAAGAACTCGAACA 1656 Query 81329 TGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCT 81385 || || ||||| ||||||| ||| | ||||| || ||||| || | || |||| Sbjct 1657 CATCTGCGTGCCAAGGCTCCAAATAGATGGCGAAGGAGCCCTTACGCTTGCCTCCGCCCT 1716 Query 81386 GGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACT 81445 ||| ||||| || || || ||||||| || |||| ||| |||||||| |||| ||| Sbjct 1717 GGTCCACGTACCGCGCGGTGTCGTTAAACACCCGCAGCATGGGGATGATGCCATTGGACG 1776 Query 81446 GACCGTTCGTACC 81458 |||||||| || Sbjct 1777 AGCCGTTCGTGCC 1789 >seq570 Length=29657 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| ||||||||||| || |||||||| || || || || || ||| | Sbjct 29280 AATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACCATCACGCTCGACGTGGAGCCGTC 29339 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || || | || ||||| || ||||||||||||||||| || || || ||||| Sbjct 29340 GGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCA 29399 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 |||||| || || || || || ||||| || ||||| | ||| || || ||| ||||| | Sbjct 29400 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGC-GACTACA 29458 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||| || || || || || || ||||||| || |||||| Sbjct 29459 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGTGGA 29508 Score = 132 bits (146), Expect = 5e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| ||||||||||| || |||||||| || || || || || ||| | Sbjct 28824 AATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACCATCACGCTCGACGTGGAGCCGTC 28883 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || || | || ||||| || ||||||||||||||||| || || || ||||| Sbjct 28884 GGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCA 28943 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 |||||| || || || || || ||||| || ||||| | ||| || || ||| ||||| | Sbjct 28944 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGC-GACTACA 29002 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||| || || || || || || ||||||| || || ||| Sbjct 29003 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGA 29052 Score = 132 bits (146), Expect = 5e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| ||||||||||| || |||||||| || || || || || ||| | Sbjct 29052 AATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACCATCACGCTCGACGTGGAGCCGTC 29111 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || || | || ||||| || ||||||||||||||||| || || || ||||| Sbjct 29112 GGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCA 29171 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 |||||| || || || || || ||||| || ||||| | ||| || || ||| ||||| | Sbjct 29172 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGC-GACTACA 29230 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||| || || || || || || ||||||| || || ||| Sbjct 29231 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGA 29280 Score = 129 bits (142), Expect = 7e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || ||||||||||| || |||||||| || || || || || ||| | Sbjct 28596 AATGCAGATTTTCGTCAAGACGCTGACGGGCAAGACCATCACACTCGACGTGGAGCCGTC 28655 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || || | || ||||| || ||||||||||||||||| || || || ||||| Sbjct 28656 GGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCA 28715 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 |||||| || || || || || ||||| || ||||| | ||| || || ||| ||||| | Sbjct 28716 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGTCGCACGCTGAGC-GACTACA 28774 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | |||| ||||| || || || || || || ||||||| || || ||| Sbjct 28775 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGTGGCGGA 28824 >seq132 Length=78195 Score = 134 bits (148), Expect = 2e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| |||||||| || |||||||| || || || || || ||| | Sbjct 54559 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 54618 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || | ||| || || |||||||||||||| || || || |||||| Sbjct 54619 GACTCGATCGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 54678 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||| ||||| || ||||| | ||| || || ||| ||||| || Sbjct 54679 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGC-GACTACAA 54737 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || || || || ||||||| |||||||| Sbjct 54738 CATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGCGGTGG 54785 Score = 134 bits (148), Expect = 2e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| |||||||| || |||||||| || || || || || ||| | Sbjct 54787 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 54846 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || | ||| || || |||||||||||||| || || || |||||| Sbjct 54847 GACTCGATCGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 54906 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||| ||||| || ||||| | ||| || || ||| ||||| || Sbjct 54907 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGC-GACTACAA 54965 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || || || || ||||||| |||||||| Sbjct 54966 CATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGCGGTGG 55013 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| |||||||| || |||||||| || || || || || ||| | Sbjct 55015 ATGCAGATCTTTGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 55074 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || | ||| || || |||||||||||||| || || || |||||| Sbjct 55075 GACTCGATCGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 55134 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||| ||||| || ||||| | ||| || || ||| ||||| || Sbjct 55135 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGC-GACTACAA 55193 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || ||||| || || || || || || |||| ||||| |||||| Sbjct 55194 CATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGCCTTCGTGGTGGA 55242 Score = 129 bits (142), Expect = 7e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||||| || |||||||| || || || || || ||| | Sbjct 54331 ATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTGGACGTGGAGCCGTCG 54390 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || | ||| || || |||||||||||||| || || || |||||| Sbjct 54391 GACTCGATCGACAACGTCAAGCAGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 54450 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||| ||||| || ||||| | ||| || || ||| ||||| || Sbjct 54451 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGTCGCACGCTGAGC-GACTACAA 54509 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || || || || ||||||| |||||||| Sbjct 54510 CATTCAGAAGGAGTCGACGCTGCACCTGGTGCTGCGTCTGCGCGGTGG 54557 >seq884 Length=21595 Score = 132 bits (146), Expect = 5e-26 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| |||||||| ||||| || || |||||||| || || || || || ||| | Sbjct 4986 ATCATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACGCTGGACGTGGAGCCG 4927 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || ||||||| ||| | ||| ||||| |||||||||||||| || || || ||| Sbjct 4926 TCCGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAGGGCATCCCGCCTGAC 4867 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||||| || || || || ||||| |||||||| | || || || | ||||| Sbjct 4866 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTAC 4807 Query 27583 AATGTCCAAAAGG 27595 || |||| |||| Sbjct 4806 AACATCCAGAAGG 4794 >seq448 Length=32517 Score = 127 bits (140), Expect = 2e-24 Identities = 181/253 (72%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 31999 TCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTG 32058 || |||||||||||| | | |||||| || ||| || || |||| || |||||||| Sbjct 21892 TCGCAGCGCAAGGTGCTTTTCGCCTGTCTGAAGCGCAAGCTAACGAGCGAGGTGAAGGTG 21833 Query 32059 GCGCAGCTGTCGGGCTACGTGGCAGAG--CAAACGGCCTATCACCACGGCGAGGCGTCGC 32116 || ||||| | || ||| |||| | || |||||||| |||||||||||||| ||| Sbjct 21832 GCACAGCTTGCTGGTTACT--GCAGTGAACACACGGCCTACCACCACGGCGAGGCTTCGT 21775 Query 32117 TCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTAC 32176 | || || ||||| ||| | || ||| |||| || || | || ||||| | | Sbjct 21774 TACACTCGACGATTGTGAACATGGCACAGGACTTCGTGGGCTCCAACAACCTTCCGCTGC 21715 Query 32177 TCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCC 32236 | | || || || |||||||| || || || || ||||| ||||| || ||| | | Sbjct 21714 TGTATCCGTCCGGTCAGTTTGGTACTCGACTACAGGGAGGCAAAGATGCCGCTAGCCCTC 21655 Query 32237 GTTACATCTTCAC 32249 ||||||||||||| Sbjct 21654 GTTACATCTTCAC 21642 >seq6666 Length=2405 Score = 118 bits (130), Expect = 1e-21 Identities = 348/533 (65%), Gaps = 5/533 (1%) Strand=Plus/Minus Query 64319 TGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGATCTCG 64378 ||||| || | |||||||| || || |||||||||| ||||||| | || || | Sbjct 2264 TGTGGCAGATGTACAAGAAGGCGGAGGCGTCATTCTGGACGGCCGAGGAGCTGGACCTGG 2205 Query 64379 CCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAG-GAACAGCACTTCATCAAGTTG 64437 | || |||| ||||||| ||||| | | ||| || | | |||||||||| Sbjct 2204 TGCACGACCTCAAGGACTGGGCGAACCTGA-CGGACAACGAGCGGTTCTTCATCAAGCAC 2146 Query 64438 GTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGACCTAAATTTT 64497 || || || |||||||| | || ||||| || ||| ||||| ||| | | || || Sbjct 2145 GTGCTGGCCTTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCCATGAACTTC 2086 Query 64498 ACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATTTAACGAA 64557 | || || || ||| | || ||||| || | ||||| | | ||| | ||| Sbjct 2085 AGCAATGAAGTGCAGGTGCCGGAGGCCCGCTGCTTCTACGGTTTCCAGATCGCCATCGAG 2026 Query 64558 AGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTCGAG 64617 | || || ||| ||||||||| | ||||||| || | |||| | ||| Sbjct 2025 AACATCCACTCAGAGGTGTATTCGCTGCTCATTGACACGTACATCAAGGATGCGACGGAG 1966 Query 64618 AAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGG 64677 ||||| ||| | | || || || || | || ||| | || || || | ||| Sbjct 1965 AAGGACCACCTGCTGCGTGCCATCGATACGATCCCGTGTGTGAAGAAGAAAGCGCACTGG 1906 Query 64678 GCCATCCGGTGGATGAATC---GTGGGTCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCC 64734 || || |||| | | | | |||||||| ||||||| || || || Sbjct 1905 GCGCTCAAGTGGTGCGACCCGCGAGTGTCGTCGTACCCGGAGCGTCTGCTGGCGTTCGCA 1846 Query 64735 TGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGG 64794 |||||| || || ||||| || || || ||||| || || |||||||| || ||||| Sbjct 1845 GCTGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCCATCTTCTGGCTCAAGAAGCGC 1786 Query 64795 GGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGG 64847 ||||| ||||| || ||| || ||||||||||||||| || |||||||| Sbjct 1785 GGCCTCATGCCTGGCCTGAGCTTCTCGAACGAGCTGATCAGCCGTGACGAGGG 1733 >seq92 Length=63871 Score = 100 bits (110), Expect = 3e-16 Identities = 346/534 (65%), Gaps = 7/534 (1%) Strand=Plus/Plus Query 64319 TGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGATCTCG 64378 ||||| || | ||||||||||| || |||||||||| ||||||| | || || | Sbjct 49002 TGTGGCAGATGTACAAGAAAGCGGAGGCCTCGTTCTGGACGGCCGAGGAGCTGGACCTGG 49061 Query 64379 CCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAG-GAACAGCACTTCATCAAGTTG 64437 | || || | ||||||| ||||| | | ||| || | | |||||||||| Sbjct 49062 TGCACGACCTGAAGGACTGGGCGAACCTGA-CGGACAACGAGCGGTTCTTCATCAAGCAC 49120 Query 64438 GTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGACCTAAATTTT 64497 || || || |||||||| | || ||||| || ||| ||||| ||| | | || || Sbjct 49121 GTGCTGGCCTTCTTCGCTGCCAGCGACGGCATCGTGAACGAGAACCTGGCCATGAACTTC 49180 Query 64498 ACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATTTAACGAA 64557 | || || || ||| | || ||||| || | ||||| | | ||| | ||| Sbjct 49181 AGCAATGAAGTGCAGGTGCCGGAGGCCCGCTGCTTCTACGGTTTCCAGATCGCCATCGAG 49240 Query 64558 AGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCCTGTCGAG 64617 | || || ||| ||||||||| | ||||||| || | |||| | ||| Sbjct 49241 AACATCCACTCAGAGGTGTATTCGCTGCTCATTGACACGTACATCAAGGATGCGACGGAG 49300 Query 64618 AAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCTGAATGG 64677 ||||| ||| | | || || || || | || ||| | || || || | ||| Sbjct 49301 AAGGACCACCTGCTGCGTGCCATCGATACGATCCCGTGTGTGAAGAAGAAAGCGCACTGG 49360 Query 64678 GCCATCCGGTGGATGAATC---GTGGGTCGTCGTTTGGTCAGCGTCTCGCAG-CTTTTGC 64733 || || |||| | | | | |||||||| |||| | || | | || || Sbjct 49361 GCGCTCAAGTGGTGCGACCCGCGAGTGTCGTCGTACCCGGAGCGCGT-GCTGACGTTCGC 49419 Query 64734 CTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCG 64793 ||||| || || ||||| || || || ||||| || || |||||||| || ||||| Sbjct 49420 AACCGTGGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCGATCTTCTGGCTCAAGAAGCG 49479 Query 64794 GGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGG 64847 ||||| | ||| || ||| || ||||||||||||||| || |||||||| Sbjct 49480 CGGCCTCACGCCTGGCCTGAGCTTCTCGAACGAGCTGATCAGCCGTGACGAGGG 49533 >seq347 Length=38231 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 32034 GAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGC 32093 |||||||| | || |||||||||| || || | || || ||| ||||||| | || Sbjct 27633 GAACCTGTAGTCGGAGCTGAAGGTGGCACAATTGGCTGGTTATGTGTCAGAGCACTCCGC 27574 Query 32094 CTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGT 32153 || || ||||||||| | | |||||| || |||||| | |||||| ||||||| Sbjct 27573 GTACCATCACGGCGAGCAGAGTTTGCAGGGCTGTATCGTCAACATGGCTCAGGACTTTGT 27514 Query 32154 CGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGG 32213 ||| || ||| | || | || |||| || ||||| || || || | || Sbjct 27513 CGGAAGCAACAACATCCACCTCCTGTCGCCAATCGGTCAGTTCGGTACGCGTTTGATGGG 27454 Query 32214 TGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCAC 32249 ||||||||||| || ||| | ||||| || ||||| Sbjct 27453 CGGCAAGGATGCAGCCAGCGCTCGTTATATTTTCAC 27418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570249490849280