Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq44985 190 2e-43 >seq44985 Length=24218 Score = 190 bits (210), Expect = 2e-43 Identities = 402/589 (68%), Gaps = 8/589 (1%) Strand=Plus/Minus Query 145684 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCG 145743 || || ||||| ||||| || || ||||| || || || | ||||||||| || || || Sbjct 8404 AGCGGTTCCACATGGTTTAGATACACGTGTGCATCACCGATGACGTGGATAAACTCGCCA 8345 Query 145744 GGCTCGAGGCCCGTGAGGTGGGCGACCATGTAG-GTCAGCAGGGAGTAGCTGGCTATGTT 145802 |||| ||||| || | || || |||| || | || || || | ||||||||| ||||| Sbjct 8344 GGCTTTAGGCCTGTCACTTGTGCTACCA-GTCGCGTAAGAAGCGCGTAGCTGGCGATGTT 8286 Query 145803 GAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCC 145862 ||| || || || || |||||||| |||||||||| |||| ||||| || | ||||| Sbjct 8285 GAAAGGTACACCAAGTCCCATGTCGGCCGAGCGCTGATACATTTGGCAAGACAATTCCCC 8226 Query 145863 GCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTC 145922 ||||||||||||||||| | | |||||| |||||||| ||||| || || || Sbjct 8225 ATTGGCCACGTAGAACTGGCAGAACATGTGGCACGGCGGCAGTGCCATCTCGTTGAGATC 8166 Query 145923 CGCCGGGTTCCAGGCGGTGAGGACGAGCC-TCCTGCTCTCGGGGTTCCTCTTGATCTCCC 145981 | || ||||| || | ||| || | || || | || || ||| | | || Sbjct 8165 TGAGGGATTCCACGCCGAGAGCACAATCCGTCGGTCAGTC-GGATTCGTACGCAGCTTGT 8107 Query 145982 CTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACG 146040 |||| || |||||||||||||| | || ||| || | | || | |||| | Sbjct 8106 GAATCACCTCAGCAAGCTGGTCCACGCCTTTGCCAGTGTAGTCCG-CATGCATGTCCGTG 8048 Query 146041 TACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCC 146100 ||| ||| || ||||| | |||||| || ||||| || || || ||||| || |||| Sbjct 8047 TACTTGGCGCCAAAGTGGCGCCACTGAAAGCCGTAAACAGGTCCAAGGTCACCAACCTCC 7988 Query 146101 CTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTG 146160 | ||| || || | | ||| | || || || || || |||||||||| | Sbjct 7987 CGATGCTGAAGTCCTCGACTATCCAGGTACTCGCGAGATCCATTACCGTCCCAGATGTGA 7928 Query 146161 ACGCCCCTC-GCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTC 146219 | | || || | | | || | | |||| || || |||||||| | ||||| Sbjct 7927 ATATCTTTCTGCTGCAAAGTGTGTGCACT-CGTGTCGCCACTAATGAACCACAAAAGCTC 7869 Query 146220 TTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAAC 146268 ||| || || | ||| |||||||||||||| ||||||| |||||| Sbjct 7868 CTCGGCTACACCTCGCCAAAAGACCCTCTTGGTTGTCAGCAATGGGAAC 7820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589735588090400