Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq45717 253 2e-62 seq46075 161 9e-35 seq35973 149 6e-31 seq46143 143 2e-29 seq46202 136 4e-27 seq39983 136 4e-27 seq44488 134 1e-26 seq39238 134 1e-26 seq3294 131 1e-25 seq43815 122 8e-23 >seq45717 Length=39516 Score = 253 bits (280), Expect = 2e-62 Identities = 981/1529 (64%), Gaps = 39/1529 (3%) Strand=Plus/Minus Query 22466 AACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCA 22525 |||||||| | || ||||| || | ||| |||||||| ||| |||| |||| ||| || Sbjct 4879 AACTCGCCAGCCAGCACGCGACGGTTGTACATGTTGGACGTGTACGGCTCGATAGACTCG 4820 Query 22526 TTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTT 22585 ||||| ||||| || || || || || || || ||||| || || | ||| |||||||| Sbjct 4819 TTGTTGCCCAGGATTTGGGCCGTGGAGGCTGTGGGCATGGGGGCAACCAGCAGCGAGTTG 4760 Query 22586 CTCAAGCCGTGCTTTGAAATTTTAC----TCTTG-AGCATCGACCAGTCCCACAGATCGG 22640 | | || || ||||| |||| |||| || | ||| | ||| || | | Sbjct 4759 CGAAGACCATG-TTTGA----TTACGTCATCTTTCAGTGCGGCCCAATTCCAAAGCCCAG 4705 Query 22641 AC---GGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGC 22697 | || || ||| ||||||||||| | || || | || || || || || Sbjct 4704 ATTGAGGTGTGACAC---CCCACATATCGAACTGGAAGATCCCCTTGCTGGCTGGCGAGC 4648 Query 22698 CTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGC 22757 | | | |||| ||||| || || | | |||||| || | || ||||| || Sbjct 4647 CCTGGAACGTCTCGTAAGGTCCCAACTCCACGGCAATCTCCATGGACGTCTCCATGGCAG 4588 Query 22758 CGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCG-GCGACGCTTTCGTAC 22816 | | || || ||||||||||| |||||||||||||| || ||| ||| ||| || Sbjct 4587 CAAAGTAGATGGTCTCGAAGATGTTCTTGTTCAATTCTTGAGCTTGCGG-GCTCTCGAAC 4529 Query 22817 GGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGG 22876 || ||||| | ||| ||||| |||| ||| |||||||| || || || || || Sbjct 4528 GGGTAGTTCATCAAGATGAAGGCGTCAGCCAGACCTTGAACGCCAATGCCAATAGGACGA 4469 Query 22877 TTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTG 22936 | || || ||| ||||| | | ||||| | || || || || Sbjct 4468 TGCCGCATGTTGGACTTGCGAGCCTCTGCTACGGGATAATAGTTGACGTCTATGACCTTG 4409 Query 22937 TTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCC 22996 || | ||| | || | | || | ||||| | ||| | Sbjct 4408 TTGAGGTTGCGCGTAATCACCTTGACCACTTCGTACAACTTGCGGTAGTCGAACACGGCG 4349 Query 22997 GATTGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCT 23056 | | || ||||| || |||| || || | ||||| || |||||||| || Sbjct 4348 TCCT---CCACGAACTTAGGGAGCGCGACGGACGCTAAGTTGCACACCGCCACCTCATCA 4292 Query 23057 TTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTG 23116 || || ||||| | | |||| |||| ||||| | || || ||||| || Sbjct 4291 GGCGATGTATACTCCATCACTTCGCAGCATAAGTTGCTGGAGCGAATGGTCCCCAAGTTC 4232 Query 23117 CTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCG 23176 ||||| || || ||| | |||||||| ||||| | || ||| |||||| Sbjct 4231 TGTTGGTTCGACTTGCGGTTGGCTGCGTCCTTGTACAGCATAAAAGGTACGCCAGTCTCG 4172 Query 23177 ACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTG 23236 | ||| | || | ||| || ||||| ||| |||| | ||| ||| | | Sbjct 4171 ATCTGAGCGTCCAAGATGGCGAACCACAGCTGCTGCGCGTTGATG-GTCTTACGCGCACG 4113 Query 23237 -CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAG 23295 |||||| ||||||||||| ||||| | || || ||| | || | || ||| || Sbjct 4112 TCCTTCTGTCTCGTACTTTTCGTACAGAGTTTCGAACTCGTCGCCCCAGCACTCGTAGAG 4053 Query 23296 GCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCAT 23355 ||| || | || | ||||| | |||||||||| | || || ||||| |||| Sbjct 4052 GCCCGGGGCTTCGTTAGGACAGAAGAGACTCCACTTGCCGTTGGCCTCTACGCGCTTCAT 3993 Query 23356 AAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCC 23415 || ||||| || | ||| || |||||||||| ||||||||||| || ||||| Sbjct 3992 GAAGAGATCAGGCACCCAGAGCGCGTAGAACAAGTCGCGGGCGCGGTGGAGTTCGTTGCC 3933 Query 23416 GGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAAC 23475 | |||||| || ||||| || || |||||||| || ||||| ||||| | ||| | Sbjct 3932 GTGGTTCTTACGCAGATCCAGGAACTCAAACACGTCGGCGTGCCAAGGCTCCAAGTAGAT 3873 Query 23476 GGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTA 23535 ||| || | |||| | ||| |||||||| || || || || || |||| ||| | Sbjct 3872 GGCGAAGGAGCCCTTGCGCTTCCCTCCGCCCTGGTCCACATAGCGCGCTGTGTCGTTAAA 3813 Query 23536 CACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACC 23595 ||| | ||||| || | | || ||||||| |||| | || ||||| | | | Sbjct 3812 CACACGCAGCATGGGGATAATGCCATTGGACGAGCCG--TTCG--TGCCACGGATGTAGC 3757 Query 23596 TTTT----GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651 | || || || | |||||| | || ||| ||||| || || ||||||| || Sbjct 3756 TGTTAGTGGCGCGGATGTTGTGCATACTGATACCGATGCCGCCCGCCCATTTCGAGATAC 3697 Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711 |||||||| || ||||||||||||||||||||||| ||| || | | || | | Sbjct 3696 AGGCGCATTGCTTTAGAGTGTCGTAGATGCCCTCGATCGAGTCATCCTGCATAGCCAAGA 3637 Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGT 23771 |||||| ||||||| || | ||||| | || ||| || || ||| |||||| Sbjct 3636 GGAAACAAGAAGACAGCTGGGGACGTGGCGTGCCCGCATTGAAGAGAGTAGGGGTGGCGT 3577 Query 23772 GCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTC-CTCT 23830 |||| ||| | | |||||| || | |||||| |||| |||| ||||| |||| Sbjct 3576 GCGTGAAGAACTTTTGCGACATGAGTTCGTACGTTTCGAGTGCGGACGTGATGTCGCTCT 3517 Query 23831 CCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT---CGACCGTGACG 23887 ||| || || | ||| || || | ||||| | || || | || ||||| | | Sbjct 3516 -TGTGGATGCCCAGGGCCACACGTAGGATCATTTGCTGCGGACGCTCCACGACCTT---G 3461 Query 23888 CCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTA 23947 || || | ||| || || |||| | ||| || || ||||||||||| || | Sbjct 3460 CCATTCACGCGGAAAAGGTAGCCGCGTTCGAGCGTCTTGAAGCCAAAATAGTCGTACTCG 3401 Query 23948 AAGTCACGATCGTGCACTATGGCCGAATT 23976 ||||| || ||||| | |||||||| || Sbjct 3400 AAGTCGCGGTCGTGGATGATGGCCGAGTT 3372 >seq46075 Length=65249 Score = 161 bits (178), Expect = 9e-35 Identities = 541/830 (65%), Gaps = 28/830 (3%) Strand=Plus/Minus Query 57573 TGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCT 57632 ||| | |||||||| |||||||| || || || ||||| | ||| || | || || Sbjct 32354 TGGCAGATGTACAAGAAGGCAGAGGCCTCCTTCTGGACTGCCGAGGAGCTGGATCTAGTG 32295 Query 57633 AAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTG 57692 | ||||| | ||| |||| |||| ||| |||| | | || || || |||||| Sbjct 32294 CACGATCTCAACGACTGGGCGAAACTCACAGACAATGAGCGTCACTTCATCAAGCACGTG 32235 Query 57693 TTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA 57752 | || || ||||| || || ||||| || ||||||||| ||| | | || |||| Sbjct 32234 CTCGCCTTCTTCGCTGCCAGTGACGGTATCGTCAACGAGAATCTGGCC--ATGAACTTCA 32177 Query 57753 CAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAA 57810 | |||||||| | | || || | |||||||| || || || | || || || | Sbjct 32176 GTAACGAAGTGCAGATCCCTGAAGCTCGCTGCTTTTATGGCTTCCAGATCGCTATCGAGA 32117 Query 57811 ACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGA 57870 || | || || ||| | || ||||| || || || |||||| | ||||| | |||| Sbjct 32116 ACATCCACTCGGAAGTCTACTCGCTGCTTATTGACACGTACATCAAGGATGCGGTGGAGA 32057 Query 57871 AACGTAGACTG-TTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGG 57929 || || ||| | || ||||| || || |||| | | | ||||| | Sbjct 32056 AAGACCACCTCCTTCGA-GCTATCGAGACCAT-CCCGTGT--GTCCAGAAGAAA------ 32007 Query 57930 TCAATCAAATGGATAAAAAGCGCCACGGCCA----CGTTCGCCGAGAGGCTAATCGCGTT 57985 || |||||||| | ||||| | ||| ||| ||| | || | ||||| Sbjct 32006 -CACTCAAATGGTGTGAC----CCACGTGTATCGTCGTACGCAGAGCGTCTGCTAGCGTT 31952 Query 57986 CGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGA 58044 || || || ||||| || ||||| || ||| || ||| | | || ||| | |||| Sbjct 31951 TGCTGCAGTGGAAGGAATCTTCTTCTCAGGCTCGTTCTGCTCCG-TGTTCTGGCTCAAGA 31893 Query 58045 AACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTC 58104 | || || || ||||| ||||| | || ||||| |||| |||||||||||| Sbjct 31892 AGCGAGGACTTATGCCTGGCCTAAGCTTCTCGAACGAAATGATTAGTCGCGACGAGGGTA 31833 Query 58105 TCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATC 58164 | || || || || |||||||| |||||||| | | ||||| || | | || | || Sbjct 31832 TGCACACGGACTTCGCGTGCCTGATGTACTCGAAGCTGGTCAACAAGCTGCCGGAGAGTC 31773 Query 58165 GCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCC 58224 | || || || || || || || ||||| || | ||||| || ||| | | Sbjct 31772 GTGTCCATGAGATCATTCGTGACGCTGTGGCGATTGAGCACGAGTTCGTGTGCGATTCTC 31713 Query 58225 TACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTG 58284 | ||||||| | |||| |||||| | | |||| |||||||||||||||| | Sbjct 31712 TCCCGGTGGAGCTCATCGGCATGAACTCGGCGCTCATGTGTCAGTACATTGAGTTTGTGG 31653 Query 58285 CCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCAT-TACAACACGAAAAATCCGTTT 58343 | || | ||| || | |||| || | | || |||||| ||| || || || Sbjct 31652 CAGATCGTCTTCTGTACTCACTGGGTGTA-TCCAAGATCTACAACGTGAAGAACCCATTC 31594 Query 58344 GATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaa 58393 || | ||| | ||||||| || |||||||||||||||| ||||| || Sbjct 31593 GACTGGATGGACATGATCTCACTACAGGGCAAGACAAACTTCTTCGAGAA 31544 >seq35973 Length=2546 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||| |||| ||||| |||||||| | ||||| || || || Sbjct 599 ATGCAGATTTTCGTGAAGACTTTGACCGGCAAGACGATCACGCTGGACGTGGAGCCTTCG 540 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| |||| | ||||| || | ||| ||||||||||||| | || || |||||| Sbjct 539 GACTCGATCGACAACGTCAAGCAAAAAATTCAGGACAAGGAAGGCATCCCTCCTGACCAG 480 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || ||| |||| ||| || ||||||| || ||| Sbjct 479 CAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACGCTGAGCGACTACAAC 420 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || || ||||| ||||| ||| | ||| | || || Sbjct 419 ATCCAGAAGGAGTCTACGCTTCACCTGGTGCTTCGCCTGCGTGGTGG 373 Score = 145 bits (160), Expect = 7e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || |||||| |||| ||||| |||||||| | ||||| || || || Sbjct 372 CATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACGATCACGCTGGACGTGGAGCCTTC 313 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | ||||| || | ||| ||| ||||||||| | || || ||||| Sbjct 312 GGACTCGATCGACAACGTCAAGCAAAAAATTCAGGATAAGGAAGGCATCCCTCCTGACCA 253 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||||| || ||||||||||| ||| |||| ||| || ||||||| || || Sbjct 252 ACAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGTACGCTGAGCGACTACAA 193 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || ||||| || ||||||||||| ||| | ||| | || || Sbjct 192 CATCCAGAAGGAATCAACGCTTCATCTGGTGCTTCGCCTGCGTGGTGG 145 Score = 105 bits (116), Expect = 6e-18 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || |||||| |||| ||||| |||||||| | ||||| || || || Sbjct 144 CATGCAGATTTTTGTGAAGACTTTGACCGGCAAGACGATCACGCTGGACGTGGAGCCTTC 85 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | ||||| || | ||| ||||||||||||| | || || ||||| Sbjct 84 AGACTCGATCGACAACGTCAAGCAAAAAATTCAGGACAAGGAAGGCATCCCTCCTGACCA 25 Query 31312 GCAGCGTCTAATATTCGCTGG 31332 |||||||| || |||||||| Sbjct 24 ACAGCGTCTGATCTTCGCTGG 4 >seq46143 Length=82526 Score = 143 bits (158), Expect = 2e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| || || |||||||| ||||| ||||||| || ||| Sbjct 41441 AAAATGCAGATTTTCGTCAAGACCCTTACGGGCAAAACCATCACGCTCGACGTGGAGCCG 41500 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || ||||| | || | ||||| |||| ||| ||||||||||||| | ||||| ||| Sbjct 41501 TCGGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCTGAC 41560 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || ||||| ||||| ||| | || || ||| || || || Sbjct 41561 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGTCGGACTAC 41620 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||| || || || ||||| || || ||||| Sbjct 41621 AACATCCAGAAGGAGTCGACCCTGCACCTGGT 41652 >seq46202 Length=175750 Score = 136 bits (150), Expect = 4e-27 Identities = 478/737 (65%), Gaps = 12/737 (2%) Strand=Plus/Minus Query 57678 TTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTG 57737 || || ||||| ||| | || || ||||| || |||||| ||||| |||||||| || Sbjct 40898 TTCATCAAACATGTGCTTGCCTTCTTCGCTGCCAGCGATGGAATTGTGAACGAGAACCTG 40839 Query 57738 GTCGAAAGATTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTC 57795 | || || ||||| | |||||||| ||| | || || | ||||||||||| || | Sbjct 40838 GC--AATGAATTTCAGTAATGAAGTGCAGGTGCCTGAAGCTCGTTGCTTTTACGGCTTCC 40781 Query 57796 AAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGA 57855 | | ||||| || ||| | || || || | || || || ||||| || |||||| | | Sbjct 40780 AGATCGCCATCGAGAACATTCACTCGGAGGTTTACTCTCTGCTCATTGACACGTACATCA 40721 Query 57856 AGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCA 57915 ||||| | |||||| ||| | || || || || || || || ||| Sbjct 40720 AGGACGCCATCGAGAAGGACCATCTGCTGCGTGCAATTGAGACCATCCCTTGTGTCACCA 40661 Query 57916 AGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGC-CACGGCCACGTTCGCCGAGAGG 57974 |||| || | ||| | ||||| ||| | | | | | || ||| | | ||| | Sbjct 40660 AGAAAGCTCACTGGGCGATCAAGTGG-TGCGACCCTCGTGTGTCCTCGTACCCGGAGCGT 40602 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATT 58033 || | || || || || || ||||| || ||||| |||||| || ||| | || || Sbjct 40601 CTCCTGGCTTTTGCTGCAGTAGAAGGCATCTTCTTCTCGGGCTCTTTCTGC-TCCATTTT 40543 Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093 |||| ||||||| || || || ||||| || || | || |||||| | || || Sbjct 40542 TTGGTTGAAGAAGCGTGGTCTCATGCCTGGTCTCAGCTTCTCGAACGAGCTCATCAGTCG 40483 Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACC 58153 |||||||| | || || || || |||||||| ||||||| | | |||| ||| | Sbjct 40482 TGACGAGGGCATGCACACGGACTTCGCGTGCCTCTTGTACTCCAAGCTGGTCACTAAGCT 40423 Query 58154 GACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGT 58213 || | || | || ||| | ||| || || |||| ||| | ||||| || Sbjct 40422 CCCGGAGAGCCGAGTGCACGAAATTGTGCGCGATGCTGTGACGATTGAACACGAGTTCGT 40363 Query 58214 CACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACAT 58273 || | || ||||||| || | || |||||| | | |||| ||||||| Sbjct 40362 ACGTGACTCGCTTCCGGTGGAGCTGATTGGCATGAACTCGGGCCTCATGTGCCAGTACAT 40303 Query 58274 TGAGTTTGTTGCCGACAGACT--TTTGCTCGAACTGATTGGAGAGCGTCATTACAACACG 58331 |||||| || || || | || | | |||| | | || | || ||| || | Sbjct 40302 TGAGTTCGTGGCTGATCGTCTGCTGTACTCGCTCGGTGTGTCCAAGATC--TACCACGCT 40245 Query 58332 AAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaa 58391 || || ||||| || | ||| | |||| || || |||| ||||| ||||| ||||| Sbjct 40244 AAGAACCCGTTCGACTGGATGGACATGATTTCTCTTCAGGGAAAGACGAACTTCTTCGAG 40185 Query 58392 aaaaaaGTTAGCGAATA 58408 ||| ||| |||| || Sbjct 40184 AAACGAGTGGGCGAGTA 40168 >seq39983 Length=4479 Score = 136 bits (150), Expect = 4e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| || || ||| | ||||| || ||||| Sbjct 35 CATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACCATTACCCTTGACGTGGAGCCGTC 94 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || |||| || ||||||||| ||| | ||||| ||||| Sbjct 95 GGACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCA 154 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || || || ||||| ||| | || ||| | ||| ||||||| || || Sbjct 155 GCAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGTCGTACTCTGAGCGACTACAA 214 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| ||||| || ||||| || || ||||| || Sbjct 215 CATCCAAAAGGAGTCGACACTCCACCTGGTTCT 247 >seq44488 Length=18910 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| ||||| ||||| ||||| || ||||| |||| || || ||| Sbjct 18668 AAAATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACTATCACGCTCGATGTAGAGCCG 18727 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || ||| |||| | || || | || ||||||||| ||| | ||||| ||| Sbjct 18728 TCGGACTCGATCGACAATGTGAAGTCTAAGATTCAGGACAAGGAGGGCATCCCGCCTGAC 18787 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 |||||||| || || || || ||||| ||| | || ||| | ||| ||||||| || Sbjct 18788 CAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGTCGTACTCTGAGCGACTAC 18847 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || ||||||||||| ||||| ||| | ||| | || |||| Sbjct 18848 AACATCCAGAAGGAGTCGACTCTTCACCTGGTGCTTCGCCTGCGTGGTGGTA 18899 >seq39238 Length=3815 Score = 134 bits (148), Expect = 1e-26 Identities = 172/233 (74%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 31192 CATGCAAAT-TTTCGTAAAGACTCTGA-CAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 |||||| || ||| || |||||| | | | ||||| |||||||| | ||||| || || Sbjct 3792 CATGCAGATCTTTTGTGAAGACTTTTAACTGGCAAGACGATCACGCTGGACGTGGAGCCT 3733 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGC-GGACAAGGAAGGCGTGCCGCCCGA 31308 || ||| |||| | ||||| || | ||| | ||||||||||||| | || || || Sbjct 3732 TCAGACTCGATCGACAACGTCAAGCAAAAAATTACAGGACAAGGAAGGCATCCCTCCTGA 3673 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || |||||||| || ||| |||| ||| || ||||||| || Sbjct 3672 CCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACGCTGAGCGACTA 3613 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || || || ||||| ||||| ||| | ||| | ||||||| Sbjct 3612 CAACATCCAGAAGGAGTCAACGCTTCACCTGGTGCTTCGCCTGCGTGGCGGTA 3560 >seq3294 Length=374 Score = 131 bits (144), Expect = 1e-25 Identities = 167/229 (73%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| || || ||| | ||||| || ||||| Sbjct 144 CATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACCATTACCCTTGACGTGGAGCCGTC 203 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| |||| | || || | || ||||||||| ||| | ||||| ||||| Sbjct 204 GGACTCGATCGACAACGTGAAGTCTAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCA 263 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || || || ||||| ||| | || ||| | ||| ||||||| || || Sbjct 264 GCAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGTCGTACTCTGAGCGACTACAA 323 Query 31372 CATTCAA-AAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| ||| || || ||||||||||| ||||| ||| | ||| | || || Sbjct 324 CATCCAAGAAGGAGTCGACTCTTCACCTGGTGCTTCGCCTGCGTGGTGG 372 Score = 100 bits (110), Expect = 3e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 ||||||||| ||| | ||||| ||||||||||| || || || || ||||| ||| | || Sbjct 9 GGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTTGA 68 Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| | ||| ||||||| || ||||| || || || ||||||||||| ||||| || Sbjct 69 GGACGGTCGTACTCTGAGCGACTACAACATCCAGAAGGAGTCGACTCTTCACCTGGTGCT 128 Query 31405 TAGACTGAGGGGCGG 31419 | | ||| | || || Sbjct 129 TCGCCTGCGTGGTGG 143 >seq43815 Length=14243 Score = 122 bits (134), Expect = 8e-23 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 || |||||| || || || ||||| |||| ||||| || ||||| | ||||| || || Sbjct 5054 AATCATGCAGATCTTTGTGAAGACCTTGACGGGCAAGACCATCACGCTGGACGTGGAGCC 5113 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||||| | || | ||||| |||| ||| ||||||||| || | ||||| || Sbjct 5114 GTCCGACAGCATTGACAATGTCAAGCAGAAAATTCAGGACAAGGAGGGAATCCCGCCTGA 5173 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||||||||| || ||||||||||| ||| | || ||| Sbjct 5174 CCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAGGAC 5213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445508635579200