Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq44985 132 4e-26 >seq44985 Length=24218 Score = 132 bits (146), Expect = 4e-26 Identities = 204/291 (70%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 20888 CGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTA 20947 ||| ||||| | ||| || | | ||||| | | || || || || ||||| || Sbjct 8441 CGGGAACGGGCACGGTGTACGCGTAAGCTGTTTCTGAAGCGGTTCCACATGGTTTAGATA 8382 Query 20948 AACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGC 21007 ||||| || ||||| | | ||| | ||| || || || | ||||| || || || || Sbjct 8381 CACGTGTGCATCACCGATGACGTGGATAAACTCGCCAGGCTTTAGGCCTGTCACTTGTGC 8322 Query 21008 GATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTC 21067 | ||| ||| || || ||||||||||||||||| || || || || || |||||||| Sbjct 8321 TACCAGTCGCGTAAGAAGCGCGTAGCTGGCGATGTTGAAAGGTACACCAAGTCCCATGTC 8262 Query 21068 GGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAA 21127 ||| || | ||| |||| ||||| |||| ||||| |||||||| ||||| || || Sbjct 8261 GGCCGAGCGCTGATACATTTGGCAAGACAATTCCCCATTGGCCACGTAGAACTGGCAGAA 8202 Query 21128 AACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGC 21178 | ||| || || || || |||||| ||| || | ||| |||||||| Sbjct 8201 CATGTGGCACGGCGGCAGTGCCATCTCGTTGAGATCTGAGGGATTCCACGC 8151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427534822564800