Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq46075 82.4 7e-11 >seq46075 Length=65249 Score = 82.4 bits (90), Expect = 7e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740 ||||| || | |||||| | |||||| || || ||| || ||||| | |||||| || Sbjct 31835 CCCTCGTCGCGACTAATCATTTCGTTCGAGAAGCTTAGGCCAGGCATAAGTCCTCGCTTC 31894 Query 13741 tttAACCAAAATATTGCAGC-GAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799 || | ||| || | | ||| ||| || || || ||||| ||||| || ||||||||||| Sbjct 31895 TTGAGCCAGAACACGG-AGCAGAACGAGCCTGAGAAGAAGATTCCTTCCACTGCAGCAAA 31953 Query 13800 CGCTATTAGTCGTTCTCCAAACGA 13823 ||||| || || ||| | |||| Sbjct 31954 CGCTAGCAGACGCTCTGCGTACGA 31977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478312056026400