Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq35973 87.8 1e-12 >seq35973 Length=2546 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971 ||||| ||| ||||| || || || || || || ||| | | ||| | || || Sbjct 162 CACCAGATGAAGCGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGCCGTCCTC 221 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 || || || || || || |||| || || ||||| |||| | ||||| ||||| Sbjct 222 CAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCAGGAGGGATGCCTTCCTTATCCTG 281 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 ||||||||| ||||| | | | | || | |||||||| || | ||| || || || Sbjct 282 AATTTTTTGCTTGACGTTGTCGATCGAGTCCGAAGGCTCCACGTCCAGCGTGATCGTCTT 341 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 ||||| |||||||||||||| || |||||| Sbjct 342 GCCGGTCAAAGTCTTCACAAAGATCTGCATG 372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354577578606480