Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq46143 86.0 5e-12 >seq46143 Length=82526 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 |||||||| || || ||||| || | || ||||||||||| || |||| |||||| Sbjct 41441 AAAATGCAGATTTTCGTCAAGACCCTTACGGGCAAAACCATCACGCTCGACGTGGAGCCG 41500 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || | | | | | || || ||||| || ||||| |||||| | || || Sbjct 41501 TCGGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCTGAC 41560 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || | || || | || || || ||||| ||||||| | | || || |||| ||| Sbjct 41561 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGTCGGACTAC 41620 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || || || || || ||||| ||||||| | ||||| || || Sbjct 41621 AACATCCAGAAGGAGTCGACCCTGCACCTGGTGTTGCGTCTGCGTGGTGG 41670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412608842486180