Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq44796 82.4 8e-11 >seq44796 Length=21875 Score = 82.4 bits (90), Expect = 8e-11 Identities = 113/157 (72%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 22091 AGCG-AGATCTTCATAGGACCCACATATTACCACAGACTCAAACATATGGTCAAGGACAA 22149 |||| |||||||||| |||||||| | ||||| | || |||||||||||| | ||||| Sbjct 7665 AGCGCAGATCTTCATCGGACCCACGTTCTACCAGCGTCTGAAACATATGGTCGACGACAA 7606 Query 22150 GATGCACGCCCGATCCCACGGCCAGGTGACGACGTTGCACCGGCAGCCGAACTGTGGGCG 22209 ||| ||| | || || | || | ||||| | |||| || ||||| | || || Sbjct 7605 GATCCACTCGCGCTCTCGTGGTCCTGTGACCATGTTGACGCGTCAGCCCATGGAAGGTCG 7546 Query 22210 TGCTCAGGGCGGCGGGCTGCGGTTCGGAGAGATGGAG 22246 |||| | || || ||||| | |||||||||||| Sbjct 7545 CGCTCGCGAAGGTGGTCTGCGTATGGGAGAGATGGAG 7509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521244016256800