Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq44985 257 2e-63 >seq44985 Length=24218 Score = 257 bits (284), Expect = 2e-63 Identities = 464/662 (70%), Gaps = 15/662 (2%) Strand=Plus/Minus Query 146920 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCC 146979 || || ||||| ||||| || || ||||| || || || | | ||| | ||| || || Sbjct 8404 AGCGGTTCCACATGGTTTAGATACACGTGTGCATCACCGATGACGTGGATAAACTCGCCA 8345 Query 146980 GGCTTAAGGCCGGTCACGTGGGCCACCATGTAG-GTGAGCAGCGAGTAGCTGGCTATGTT 147038 ||||| ||||| ||||| || || |||| || | || || |||| ||||||||| ||||| Sbjct 8344 GGCTTTAGGCCTGTCACTTGTGCTACCA-GTCGCGTAAGAAGCGCGTAGCTGGCGATGTT 8286 Query 147039 GAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCC 147098 ||| || || || || |||||||| |||| | ||| |||| ||||| || | ||||| Sbjct 8285 GAAAGGTACACCAAGTCCCATGTCGGCCGAGCGCTGATACATTTGGCAAGACAATTCCCC 8226 Query 147099 GTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTC 147158 | ||||||||| |||||||| | ||||||||||||||||| ||||| || || || Sbjct 8225 ATTGGCCACGTAGAACTGGCAGAACATGTGGCACGGCGGCAGTGCCATCTCGTTGAGATC 8166 Query 147159 CGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTG-CTCTCGGGGTTCCTCTTAATCTCTT 147217 | ||| ||||| ||||||| ||| | ||| | | | || || ||| | | || | Sbjct 8165 TGAGGGATTCCACGCCGAGAGCACAATCCGTCGGTCAGTC-GGATTCGTACGCAGCTTGT 8107 Query 147218 CGATAACC-CACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCAC 147275 || ||| || | |||||||||||||| | ||| ||||| | | ||| |||| Sbjct 8106 GAATCACCTCAGC-AAGCTGGTCCACGCCTTTGCCAGTGTAGTCCG-CATGCATGTCCGT 8049 Query 147276 GTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTT 147335 |||| |||| |||||||| | |||||| |||||||| || || || ||||| || || Sbjct 8048 GTACTTGGCGCCAAAGTGGCGCCACTGAAAGCCGTAAACAGGTCCAAGGTCACCAACCTC 7989 Query 147336 TCTGTGCGAGAAGCCCGC-CCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGC 147394 | ||| |||| || | | | || ||||| | || || | ||||||||||| Sbjct 7988 CCGATGC-TGAAGTCCTCGACTATCCAGGTACTCGCGAGATCCATTACCGTCCCAGATGT 7930 Query 147395 CCA-CTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGC 147453 | || | || | | | | | | |||| ||| | |||||||| | ||| Sbjct 7929 GAATATCTTTCTGCTGCAAAGTGTGTGCACT-CGTGTCGCCACTAATGAACCACAAAAGC 7871 Query 147454 TCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAAC---TGGTCC 147510 ||||| || || | |||||||||||||||||| ||||||| |||||| | || | Sbjct 7870 TCCTCGGCTACACCTCGCCAAAAGACCCTCTTGGTTGTCAGCAATGGGAACACATTGTTC 7811 Query 147511 CTCAGCGAATACCTCGCCTGGTCCCCAAACACAGACAGCGTGCCCGTGCCCGTCCTGTCC 147570 ||||| | | ||| ||| ||||||| || |||| ||||||||| || || | ||| Sbjct 7810 CTCAGGCTAAATCTCATCTGTGCCCCAAAGACTGACAACGTGCCCGTTCCTGTGCGGTCT 7751 Query 147571 TC 147572 || Sbjct 7750 TC 7749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583150598064000