Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq45717 318 7e-82 seq44488 158 1e-33 seq39983 158 1e-33 seq46143 154 2e-32 seq3294 154 2e-32 seq43815 141 1e-28 seq35973 134 2e-26 seq46075 127 2e-24 seq45735 127 2e-24 seq46202 120 3e-22 seq39238 111 2e-19 >seq45717 Length=39516 Score = 318 bits (352), Expect = 7e-82 Identities = 1085/1668 (65%), Gaps = 32/1668 (2%) Strand=Plus/Minus Query 80041 CGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTG 80100 |||| ||||||||||| |||||||| |||||||||||| |||| | |||||| || || Sbjct 5197 CGCATGTAGTACATGCCGGTCTTGAGTCCCTTCTTCCAGGCGTAAAAGTGCATGGACGTG 5138 Query 80101 AGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAA 80160 ||||| | || |||| | ||| ||||||||| |||||| ||| ||||| | Sbjct 5137 AGCTTACTGATAGTCGGGTCAGCGATGTGGATGTTCAGCGACTGACTCTGGCAGATATAC 5078 Query 80161 GCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGA 80220 || || || || || | || || | || | ||| ||| || ||||| || || Sbjct 5077 GCGCCTCGGTCCGCTGACAAGTCCAGAACAGCCTTCTGTTTGATCTCCCACACCGTTTTG 5018 Query 80221 TACACCTTACGAAGCTCCTCTGGAATG-TCCAGAT--TTTGCACACTGCCACCGTCCTTT 80277 ||| || || || || |||||| || ||| |||| || |||||| || || Sbjct 5017 TACTTCTCCTTAACGTCTTCCGGAATGGTCTTGATCTTTTGGACTGAGCCACCATCATTC 4958 Query 80278 ACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCTTTCACAAGG 80337 | ||| ||||| | ||| | |||||||| || |||| | || || |||| ||| Sbjct 4957 AGAATCTGATTGCGTACTTCCGGCGTCCAGATTCCGAGCTCGATTAGTTCCTTCATCAGG 4898 Query 80338 TGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTG 80397 |||||||| | ||| ||||| || || || |||||| |||| ||| | ||| Sbjct 4897 TGCTTGTTGACGATGGTGAACTCGCCAGCCAGCACGCGACGGTTGTACATGTTGGACGTG 4838 Query 80398 TAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGG 80457 || ||||| | | ||||||||| || ||||| || |||||| || || ||||| ||| Sbjct 4837 TACGGCTCGATAGACTCGTTGTTGCCCAGGATTTGGGCCGTGGAGGCTGTGGGCATGGGG 4778 Query 80458 CCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGACCAA 80517 | |||| ||| || || || || || || || | | || || || | | |||| Sbjct 4777 GCAACCAGCAGCGAGTTGCGAAGACCATGTTTGATTACGTCATCTTTCAGTGCGGCCCAA 4718 Query 80518 AAATCAACCCCA----ACGCTGTG--ACCCCACATGTCGTGCTGCAAGATGCCCTCCGAC 80571 || |||| | |||| ||||||||| ||| ||| ||||| |||| Sbjct 4717 TTCCAAAGCCCAGATTGAGGTGTGACACCCCACATATCGAACTGGAAGATCCCCTTGCTG 4658 Query 80572 GCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTC---ACACGAC 80628 || || || ||| |||||||||||| || ||| | | ||| | ||| ||| | Sbjct 4657 GCTGGCGAGCCCTGGAACGTCTCGTAAGGTCCCAACTCCACGGCAATCTCCATGGACGTC 4598 Query 80629 TCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGT 80688 ||||| ||| || || ||| ||| |||| | |||||||| | | || || Sbjct 4597 TCCAT---GGCAGCAAAGTAGATGGTCTCGAAGATGTTCTTGTTCAATTCTTGAGCTTGC 4541 Query 80689 GGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATG 80748 ||| ||||||| || ||||| ||||| |||||||||| || |||||||| ||| Sbjct 4540 GGGCTCTCGAACGGGTAGTTCATCAAGATGAAGGCGTCAGCCAGACCTTGAACGCCAATG 4481 Query 80749 GCGATCGGGCGGTGGCGCTTGTTCGA-TCGCTCGGCCTCCGGAATTGGGTAAAAGTTATT 80807 | || || || || ||| |||| || | || ||||| | | || ||| |||| Sbjct 4480 CCAATAGGACGATGCCGCATGTTGGACTTGC-GAGCCTCTGCTACGGGATAATAGTTGAC 4422 Query 80808 ATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAA 80867 || ||||| ||| |||||||| |||| ||| || || | | || | | Sbjct 4421 GTCTATGACCTTGTTGAGGTTGCGCGTAATCACCTTGACCACTTCGTACAACTTGCGGTA 4362 Query 80868 GTCGAATTGGTTCCCCTTCACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGC 80927 |||||| | ||| ||| || || || | |||||| | |||||||| || Sbjct 4361 GTCGAACACGGCGTCCTCCACGAACTTAGGGAGCGCGACGGACGCTAAGTTGCACACCGC 4302 Query 80928 CACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGT 80987 |||||| |||| |||| |||| | | ||| ||| || || || ||| || Sbjct 4301 CACCTCATCAGGCGATGTATACTCCATCACTTCGCAGCATAAGTTGCTGGAGCGAATGGT 4242 Query 80988 ACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGT 81047 |||| ||| | ||||| |||||| |||| ||||||||||| ||| | || Sbjct 4241 CCCCAAGTTCTGTTGGTTCGACTTGCGGTTGGCTGCGTCCTTGTACAGCATAAAAGGTAC 4182 Query 81048 ACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTT 81107 || ||||||| ||| | | | ||||||| ||| | || |||| |||| ||| Sbjct 4181 GCCAGTCTCGATCTGAGCGTCCAAGATGGCGAACCACAGCTGCTGCGCGTTGATGGTCTT 4122 Query 81108 GCG-GAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGA 81165 || | | | ||||| | | | ||||| |||| || | ||||||| | | || Sbjct 4121 ACGCGCACGT-CCTTCTGTCTCGTACTTTTCGTACAGAGT-TTCGAACTCGTCGCCCCAG 4064 Query 81166 AGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCT 81225 || |||| | ||| |||||||| || | || ||| | | || | |||| Sbjct 4063 CACTCGTAGAGGCCCGGGGCTTCGTTAGGACAGAAGAGACTCCACTTGCCGTTGGCCTCT 4004 Query 81226 ACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCC 81285 || ||||||||| ||||| | |||||| ||| ||||| ||||||| ||| Sbjct 4003 ACGCGCTTCATGAAGAGATCAGGCACCCAGAGCGCGTAGAACAAGTCGCGGGCGCGGTGG 3944 Query 81286 TCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGC 81345 || | || ||||| |||| || || || || | | ||| || ||||| ||| Sbjct 3943 AGTTCGTTGCCGTGGTTCTTACGCAGATCCAGGAACTCAAACACGTCGGCGTGCCAAGGC 3884 Query 81346 TCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCA 81402 |||| || | ||||| || |||||||| | || ||||||| || || || || Sbjct 3883 TCCAAGTAGATGGCGAAGGAGCCCTTGCGCTTCCCTCCGCCCTGGTCCACATAGCGCGCT 3824 Query 81403 GTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACG 81462 || ||||||| ||||||| ||| ||||| || |||| ||| |||||||| ||||| Sbjct 3823 GTGTCGTTAAACACACGCAGCATGGGGATAATGCCATTGGACGAGCCGTTCGT-GCCACG 3765 Query 81463 ATACGCGACCCCT--TGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACT 81520 | | | | ||||||| | ||| || | ||||||||| || | ||| | Sbjct 3764 -GATGTAGCTGTTAGTGGCGCGGATGTTGTGCATACTGATACCGATGCCGCCCGCCCATT 3706 Query 81521 TTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCA 81580 | || || || || | || | || || || || |||||||| || | | || Sbjct 3705 TCGAGATACAGGCGCATTGCTTTAGAGTGTCGTAGATGCCCTCGATCGAGTCATCCTGCA 3646 Query 81581 T-GTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTT 81639 | | |||| | |||||| |||| ||| || | | | ||| |||||||| || || Sbjct 3645 TAGCCAAG-AGGAAACAAGAAGACAGCTGGGGACGTGGCGTGCCCGCATTGAAGAGAGTA 3587 Query 81640 GGGGTCGCGTGAATGAAATAACGGTT-TGACATCAGGTCATAGGTTTC 81686 ||||| ||||| || || ||| || ||||| || || || ||||| Sbjct 3586 GGGGTGGCGTGCGTG-AAGAACTTTTGCGACATGAGTTCGTACGTTTC 3540 >seq44488 Length=18910 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || |||||||| || ||||||||||| || || || || ||| | Sbjct 18670 AATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACTATCACGCTCGATGTAGAGCCGTC 18729 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || || | ||| ||||| |||| ||||||||||||||||| || || || ||||| Sbjct 18730 GGACTCGATCGACAATGTGAAGTCTAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCA 18789 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 |||||| || || ||||| || ||||| || ||||| | |||||| || ||| ||||| | Sbjct 18790 GCAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGTCGTACTCTGAGC-GACTACA 18848 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| || |||||||| || || | || || || ||||| Sbjct 18849 ACATCCAGAAGGAGTCGACTCTTCACCTGGTGCTTCGCCTGCGTGGTGG 18897 >seq39983 Length=4479 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||||| || |||||||| ||||| ||||| || ||| | Sbjct 36 ATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACCATTACCCTTGACGTGGAGCCGTCG 95 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||| || ||||||||||||||||| || || || |||||| Sbjct 96 GACTCGATCGACAACGTGAAGCAGAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 155 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || ||||| || ||||| || ||||| | |||||| || ||| ||||| || Sbjct 156 CAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGTCGTACTCTGAGC-GACTACAA 214 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||||||||| || || || || || || ||||||||||||| ||| Sbjct 215 CATCCAAAAGGAGTCGACACTCCACCTGGTTCTGCGTCTTCGCGGCGGA 263 >seq46143 Length=82526 Score = 154 bits (170), Expect = 2e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| ||||| ||||| || || || || || || ||| | Sbjct 41443 AATGCAGATTTTCGTCAAGACCCTTACGGGCAAAACCATCACGCTCGACGTGGAGCCGTC 41502 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || ||||||| ||| | ||| ||||| ||||||||||| || || || || ||||| Sbjct 41503 GGACAGCATTGACAATGTCAAGCAGAAAATCCAGGACAAGGAAGGCATCCCGCCTGACCA 41562 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||||||| || || || || ||||| |||||||||| || || || | ||||| || Sbjct 41563 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGTCGGACTACAA 41622 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || || |||||||| || ||||| Sbjct 41623 CATCCAGAAGGAGTCGACCCTGCACCTGGTGTTGCGTCTGCGTGGTGG 41670 >seq3294 Length=374 Score = 154 bits (170), Expect = 2e-32 Identities = 174/229 (76%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||||| || |||||||| ||||| ||||| || ||| | Sbjct 145 ATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACCATTACCCTTGACGTGGAGCCGTCG 204 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||| |||| ||||||||||||||||| || || || |||||| Sbjct 205 GACTCGATCGACAACGTGAAGTCTAAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 264 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || ||||| || ||||| || ||||| | |||||| || ||| ||||| || Sbjct 265 CAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGTCGTACTCTGAGC-GACTACAA 323 Query 27585 TGTCCAA-AAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| ||||| || |||||||| || || | || || || ||||| Sbjct 324 CATCCAAGAAGGAGTCGACTCTTCACCTGGTGCTTCGCCTGCGTGGTGG 372 Score = 113 bits (124), Expect = 5e-20 Identities = 113/144 (78%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||||||||||||||| || || || ||||||||||| || || ||||| || ||| Sbjct 1 AAGATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAGCGCCTCATCTTTGCCGGCAAG 60 Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 || || ||||| | |||||| || ||| ||||| || |||| ||||| || |||||||| Sbjct 61 CAGCTTGAGGACGGTCGTACTCTGAGC-GACTACAACATCCAGAAGGAGTCGACTCTTCA 119 Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632 || || | || || || ||||| Sbjct 120 CCTGGTGCTTCGCCTGCGTGGTGG 143 >seq43815 Length=14243 Score = 141 bits (156), Expect = 1e-28 Identities = 147/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| |||||||| ||||| | || |||||||| || || || || || ||| | Sbjct 5055 ATCATGCAGATCTTTGTGAAGACCTTGACGGGCAAGACCATCACGCTGGACGTGGAGCCG 5114 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || ||||||| ||| | ||| ||||||||||||||||||||||| || || ||| Sbjct 5115 TCCGACAGCATTGACAATGTCAAGCAGAAAATTCAGGACAAGGAGGGAATCCCGCCTGAC 5174 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||||||||| || || ||||| ||||| |||||||| | || || || | ||||| Sbjct 5175 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTAC 5234 Query 27583 AATGTCCAAAAGG 27595 || |||| |||| Sbjct 5235 AACATCCAGAAGG 5247 >seq35973 Length=2546 Score = 134 bits (148), Expect = 2e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| | ||||||||||| || || || || || ||| | Sbjct 371 ATGCAGATCTTTGTGAAGACTTTGACCGGCAAGACGATCACGCTGGACGTGGAGCCTTCG 312 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || | ||| ||||||||||| ||||| || || ||||| ||||| Sbjct 311 GACTCGATCGACAACGTCAAGCAAAAAATTCAGGATAAGGAAGGCATCCCTCCTGACCAA 252 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||| ||||| || ||||| | ||||| || ||| ||||| || Sbjct 251 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGTACGCTGAGC-GACTACAA 193 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| || |||||||| || | || || || ||||| Sbjct 192 CATCCAGAAGGAATCAACGCTTCATCTGGTGCTTCGCCTGCGTGGTGG 145 Score = 125 bits (138), Expect = 8e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| | ||||||||||| || || || || || ||| | Sbjct 599 ATGCAGATTTTCGTGAAGACTTTGACCGGCAAGACGATCACGCTGGACGTGGAGCCTTCG 540 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || | ||| ||||||||||||||||| || || ||||| |||||| Sbjct 539 GACTCGATCGACAACGTCAAGCAAAAAATTCAGGACAAGGAAGGCATCCCTCCTGACCAG 480 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||||||||| || ||||| | || || || ||| ||||| || Sbjct 479 CAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACGCTGAGC-GACTACAA 421 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || ||||| || || | || || || ||||| Sbjct 420 CATCCAGAAGGAGTCTACGCTTCACCTGGTGCTTCGCCTGCGTGGTGG 373 Score = 86.0 bits (94), Expect = 7e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| | ||||||||||| || || || || || ||| | Sbjct 143 ATGCAGATTTTTGTGAAGACTTTGACCGGCAAGACGATCACGCTGGACGTGGAGCCTTCA 84 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || | ||| ||||||||||||||||| || || ||||| ||||| Sbjct 83 GACTCGATCGACAACGTCAAGCAAAAAATTCAGGACAAGGAAGGCATCCCTCCTGACCAA 24 Query 27526 CAGCGTCTAATTTTTGCTGGTA 27547 |||||||| || || ||||||| Sbjct 23 CAGCGTCTGATCTTCGCTGGTA 2 >seq46075 Length=65249 Score = 127 bits (140), Expect = 2e-24 Identities = 357/540 (66%), Gaps = 21/540 (4%) Strand=Plus/Minus Query 64315 GATTTGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGAT 64374 ||| ||||| || | |||||||| || || |||||||| | ||||||| | ||| Sbjct 32360 GATGTGTGGCAGATGTACAAGAAGGCAGAGGCCTCCTTCTGGACTGCCGAGGAGCTGGAT 32301 Query 64375 CTCGCCAAGGATCTCAGCGACTGGGAAAACCTAAACTCACAG-----GAACAGCACTTCA 64429 || | | ||||||| |||||||| | |||||||||| || | ||||||| Sbjct 32300 CTAGTGCACGATCTCAACGACTGGG-----CGAAACTCACAGACAATGAGCGTCACTTCA 32246 Query 64430 TCAAGTTGGTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGACC 64489 ||||| || || || |||||||| | |||||||| || || |||||| ||| | Sbjct 32245 TCAAGCACGTGCTCGCCTTCTTCGCTGCCAGTGACGGTATCGTCAACGAGAATCTGGCCA 32186 Query 64490 TAAATTTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGAT 64549 | || || | || || || |||||||| || || || | || |||| | ||| Sbjct 32185 TGAACTTCAGTAACGAAGTGCAGATCCCTGAAGCTCGCTGCTTTTATGGCTTCCAGATCG 32126 Query 64550 TTAACGAAAGTATTCA-TGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGAT 64608 || ||| | || || | | || | || ||||| | ||||||| || | |||| Sbjct 32125 CTATCGAGAACATCCACTCGGAAGTC-TACTCGCTGCTTATTGACACGTACATCAAGGAT 32067 Query 64609 CCTGTCGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAG 64668 | || ||||| || || | | ||||| ||||| | |||| ||| | | || Sbjct 32066 GCGGTGGAGAAAGACCACCTCCTTCGAGCTATCGAGACCAT-CCCG-TGTGTCCAGAA-- 32011 Query 64669 GCTGAATGGGCCATCCGGTG-GATGAATCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGC 64727 ||| || |||| || | |||| ||||||| | ||||||| ||| Sbjct 32010 ---GAAACACTCAAATGGTGTGACCCA-CGTGTATCGTCGTACGCAGAGCGTCTGCTAGC 31955 Query 64728 TTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAA 64787 ||||| ||||||||||| ||||| || || || ||||| || | |||||||| || Sbjct 31954 GTTTGCTGCAGTGGAAGGAATCTTCTTCTCAGGCTCGTTCTGCTCCGTGTTCTGGCTCAA 31895 Query 64788 AAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGG 64847 ||||| || || ||||| || || || |||||||| |||| ||| |||||||| Sbjct 31894 GAAGCGAGGACTTATGCCTGGCCTAAGCTTCTCGAACGAAATGATTAGTCGCGACGAGGG 31835 >seq45735 Length=40545 Score = 127 bits (140), Expect = 2e-24 Identities = 307/458 (67%), Gaps = 10/458 (2%) Strand=Plus/Minus Query 31950 TGAAGATATCAAGCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAA 32009 || ||||| | |||| || |||| |||| || || |||||| || ||||| || Sbjct 20505 TGCAGATAACCAGCGATCGCTTCCGTCGGTGGTTGATGGTCTCAAGATCTCGCAGCGAAA 20446 Query 32010 GGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCGCAGCTGTC 32069 || | | ||||||| | || || || | ||||| |||||||||| ||||| | Sbjct 20445 AGTTCTGTTCGCCTGCATGAAACGCAAACTTACAAGTGAAGTGAAGGTGGCACAGCTAGC 20386 Query 32070 GGGCTACGTGGCAG--AGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACC 32127 || || | |||| |||| ||||| ||||||||||| || || ||| | || || Sbjct 20385 AGGTTA--TTGCAGCGAGCACACGGCGTATCACCACGGAGAAGCTTCGTTACACTCGACG 20328 Query 32128 ATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCT 32187 ||||||||| | || ||| |||| || || | ||||||||| |||| || || Sbjct 20327 ATTGTCAACATGGCGCAGGACTTCGTGGGATCCAATAACCTGCCGCTACTGTTTCCGTCA 20268 Query 32188 GGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTC 32247 || |||||||| || || | || || ||||||||||| || | || ||||||||| Sbjct 20267 GGTCAGTTTGGTACGCGATTGCAAGGAGGTAAGGATGCTGCTAGTCCTCGATACATCTTC 20208 Query 32248 ACCCGTCTCGCACCTTC-GACGCGCAAGATTTTCGACCCGTCG--GACGATGCGGTGCTC 32304 || || ||| | || ||| | | || |||| | || || ||| |||| Sbjct 20207 ACGTTGCT-GCAGAAGCACACTCGCTTGGTATT--TCCCGAAGAAGATGACGCGTTGCTT 20151 Query 32305 AAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCG 32364 ||| | |||||| || | ||||||||| ||||||||| || | | ||| Sbjct 20150 CGCTACGCTGATGATGATGGATTCCCGGTCGAGCCTGTGTTCTACGTACCTATTATCCCG 20091 Query 32365 ATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402 ||| | | ||||| |||||||| || ||||| || || Sbjct 20090 ATGCTACTCGTGAATGGTGCAGAGGGAATCGGTACAGG 20053 >seq46202 Length=175750 Score = 120 bits (132), Expect = 3e-22 Identities = 329/501 (66%), Gaps = 5/501 (1%) Strand=Plus/Minus Query 64351 TTCTGGACGGTCGAGGAGGTTGATCTCGCCAAGGATCTCAGCGACTGGGAAAACCTAAAC 64410 |||||||| | ||||||| | ||||| | | || |||| |||||| || || | | Sbjct 40973 TTCTGGACTGCCGAGGAGCTCGATCTGGTGCACGACCTCAAGGACTGGAGCAAGCTTA-C 40915 Query 64411 TCACAG-GAACAGCACTTCATCAAGTTGGTCCTAGCATTCTTCGCATCAAGTGACGGAAT 64469 ||| || | ||||||||||| || || || |||||||| | || || ||||| Sbjct 40914 GGACAACGAGCGTCACTTCATCAAACATGTGCTTGCCTTCTTCGCTGCCAGCGATGGAAT 40855 Query 64470 TGTGTTTGAGAATTTGGACCTAAATTTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTC 64529 |||| ||||| ||| | ||||| | || || || ||| | || || || || | Sbjct 40854 TGTGAACGAGAACCTGGCAATGAATTTCAGTAATGAAGTGCAGGTGCCTGAAGCTCGTTG 40795 Query 64530 ATTCTATGCGTATCAGGGATTTAACGAAAGTATTCATGGCGAGACGTATTCGCTCATGAT 64589 || || | | ||| | ||| | ||||| ||| || || || | || Sbjct 40794 CTTTTACGGCTTCCAGATCGCCATCGAGAACATTCACTCGGAGGTTTACTCTCTGCTCAT 40735 Query 64590 TGACAAGTTTGTTCGGGATCCTGTCGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGT 64649 ||||| || | ||| | |||||||||| ||| | | || || ||||| | Sbjct 40734 TGACACGTACATCAAGGACGCCATCGAGAAGGACCATCTGCTGCGTGCAATTGAGACCAT 40675 Query 64650 ACCCGCTGTTACTAAAAAGGCTGAATGGGCCATCCGGTGGATGAA---TCGTGGGTCGTC 64706 || ||| || || || ||| | ||||| ||| |||| | ||||| ||| || Sbjct 40674 CCCTTGTGTCACCAAGAAAGCTCACTGGGCGATCAAGTGGTGCGACCCTCGTGTGTCCTC 40615 Query 64707 GTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATT 64766 || |||||||| |||||||| || ||||| || ||||| || || || || Sbjct 40614 GTACCCGGAGCGTCTCCTGGCTTTTGCTGCAGTAGAAGGCATCTTCTTCTCGGGCTCTTT 40555 Query 64767 CTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGA 64826 ||| || ||||| ||| | || ||||| || || ||||| ||||| || |||||||| Sbjct 40554 CTGCTCCATTTTTTGGTTGAAGAAGCGTGGTCTCATGCCTGGTCTCAGCTTCTCGAACGA 40495 Query 64827 GCTGATCTCTCGGGACGAGGG 64847 ||| ||| ||| |||||||| Sbjct 40494 GCTCATCAGTCGTGACGAGGG 40474 >seq39238 Length=3815 Score = 111 bits (122), Expect = 2e-19 Identities = 167/231 (72%), Gaps = 5/231 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTT-GTCAAGACGCTTACC-GGCAAGACTATTACTCTTGAGGTTGAGTCAG 27463 ||||| |||||| || ||||| ||| | |||||||| || || || || || ||| | Sbjct 3791 ATGCAGATCTTTTGTGAAGACTTTTAACTGGCAAGACGATCACGCTGGACGTGGAGCCTT 3732 Query 27464 GTGATAGCATTGCAAATTTGAAGGCTAAAATT-CAGGACAAGGAGGGAATTCCTCCAGAC 27522 || || | || | ||| |||||| ||||||||||| || || ||||| ||| Sbjct 3731 CAGACTCGATCGACAACGTCAAGCAAAAAATTACAGGACAAGGAAGGCATCCCTCCTGAC 3672 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTA 27581 ||||||||||| || || ||||||||||| || ||||| | || || || ||| ||||| Sbjct 3671 CAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTGGAGGACGGCCGCACGCTGAGC-GACTA 3613 Query 27582 TAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| || || ||||| || || | || || || || || Sbjct 3612 CAACATCCAGAAGGAGTCAACGCTTCACCTGGTGCTTCGCCTGCGTGGCGG 3562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569980618011200