Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq46231 208 2e-48 seq46259 161 2e-34 seq46143 145 2e-29 seq35973 143 6e-29 seq39983 141 2e-28 seq11531 138 3e-27 seq44488 131 4e-25 seq39238 129 1e-24 seq46230 123 6e-23 seq3294 120 7e-22 seq43815 118 3e-21 seq46232 114 3e-20 seq46228 114 3e-20 seq46237 105 2e-17 seq46233 102 2e-16 seq19975 102 2e-16 seq42481 98.7 2e-15 seq44758 87.8 4e-12 >seq46231 Length=5327 Score = 208 bits (230), Expect = 2e-48 Identities = 219/288 (76%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499 ||| ||||||||||| ||| ||| ||| ||||| || | ||||| | ||||||| | | Sbjct 3505 AACTTTATATTTAATTTTTAGTGCTTTTGCTGGTGTTGTTGGTACAACATTTTCTCTTTT 3446 Query 7500 TATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTA 7559 || || | |||||||| || ||| |||||| || | || ||| ||| | || Sbjct 3445 AATTAGAATGGAATTAGCACAACCAGGTAATCAAATTTTTATGGGAAATCATCAATTATA 3386 Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTAT 7619 || ||| || |||| || ||||| ||| ||||| |||||||||| |||||||| | | | Sbjct 3385 TAATGTTGTTGTTACCGCACATGCTTTTATTATGGTTTTCTTTTTAGTTATGCCTGCTTT 3326 Query 7620 GATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTT 7679 || || ||||| || ||||| || ||||||||||||| |||||||||||||||||||| Sbjct 3325 AATCGGTGGTTTTGGTAATTGGTTTATTCCTTTAATGATAGGTGCTCCTGATATGGCTTT 3266 Query 7680 TCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATT 7727 ||| | | || ||||| |||||||| ||| |||| ||||| ||||| Sbjct 3265 TCCTCGTATGAATAATATTAGTTTTTGGTTATTACCTCCTTCTTTATT 3218 Score = 118 bits (130), Expect = 3e-21 Identities = 136/182 (75%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAG 371424 || |||||| |||| | | ||||||||| ||||||||||| | || || | |||||| Sbjct 2999 AAAGGTAATCTATGAAAACTTAAACCAGGAGCTCTCATATTATAAATTGTTGAAATAAAA 3058 Query 371425 TTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATCG 371484 || ||||| |||| | |||||| ||||||| | |||||||||||| || |||||||| Sbjct 3059 TTAATAGCACCTAATAAAGAAGAAATACCTGATAAATGTAAACTAAAAATAGCTAAATCT 3118 Query 371485 ACGGAACCGCCGGAGTGAGCT---ACAATAGAACTTAACGGCGGGTAAACTGTTCAGCCG 371541 || ||| || || || ||| ||| |||| ||| || || |||||||| || || Sbjct 3119 ACAGAAGGTCCTGAATGTGCTTGAACACTAGA---TAATGGTGGATAAACTGTCCAACCA 3175 Query 371542 GT 371543 || Sbjct 3176 GT 3177 Score = 98.7 bits (108), Expect = 2e-15 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 || |||||||||||||| || |||| ||||||||| | | ||||| ||||| |||||| Sbjct 2822 TCTGGATGACCAAAAAACCAAAATAGATGTTGATATAATACTGGATCACCTCCACCTGAT 2881 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTA 370769 |||||| |||| ||| || |||||||||||||||| Sbjct 2882 GGATCATAAAATGAAGTGTTTAAATTTCTATCAGTTA 2918 >seq46259 Length=319 Score = 161 bits (178), Expect = 2e-34 Identities = 160/206 (78%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 7522 CCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCAT 7581 || ||| |||||| || | || ||| ||| | || || ||| || |||| || ||| Sbjct 8 CCAGGTAATCAAATTTTATG-GGAAATCATCAATTATATAATGTTGTTGTTACCGCACAT 66 Query 7582 GCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGA 7641 || ||| ||||| |||||||||| |||||||| | | | || || ||||| || ||||| Sbjct 67 GCTTTTATTATGGTTTTCTTTTTAGTTATGCCTGCTTTAATCGGTGGTTTTGGTAATTGG 126 Query 7642 TTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGT 7701 || ||||||||||||| ||||||||||||||||||||||| | | || ||||| ||| Sbjct 127 TTTATTCCTTTAATGATAGGTGCTCCTGATATGGCTTTTCCTCGTATGAATAATATTAGT 186 Query 7702 TTTTGATTACTACCGCCTTCCTTATT 7727 ||||| ||| |||| ||||| ||||| Sbjct 187 TTTTGGTTATTACCTCCTTCTTTATT 212 >seq46143 Length=82526 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || ||||| || || || || || |||| ||||| || | || ||| Sbjct 41665 ACGCAGACGCAACACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGACAGAGT 41606 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || ||||| ||||| || || Sbjct 41605 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGCGGGATGCC 41546 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| ||||| || ||||| ||| || ||| |||| || | |||||||| | Sbjct 41545 TTCCTTGTCCTGGATTTTCTGCTTGACATTGTCAATGCTGTCCGACGGCTCCACGTCGAG 41486 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTATG 225719 |||||| || |||||||| | || || | ||| | |||||||| || Sbjct 41485 CGTGATGGTTTTGCCCGTAAGGGTCTTGACGAAAATCTGCATTTTCTG 41438 >seq35973 Length=2546 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || |||| ||||| ||| || || | || || Sbjct 388 AGCACCAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCC 447 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || || || ||||||||||| Sbjct 448 TCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 507 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || |||||||| || ||||| | ||| || | |||||||| | |||||||||| Sbjct 508 TGAATTTTTTGCTTGACGTTGTCGATCGAGTCCGAAGGCTCCACGTCCAGCGTGATCGTC 567 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | ||| | ||||| Sbjct 568 TTGCCGGTCAAAGTCTTCACGAAAATCTGCAT 599 Score = 140 bits (154), Expect = 8e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || || || || || ||||| || |||| ||||| ||| || || | || || Sbjct 160 AGCACCAGATGAAGCGTTGATTCCTTCTGGATGTTGTAGTCGCTCAGCGTACGGCCGTCC 219 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || |||||||| || || || |||||||| || Sbjct 220 TCCAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGGTCAGGAGGGATGCCTTCCTTATCC 279 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || || |||||||| || ||||| | ||| || | |||||||| | |||||||||| Sbjct 280 TGAATTTTTTGCTTGACGTTGTCGATCGAGTCCGAAGGCTCCACGTCCAGCGTGATCGTC 339 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| |||||||| || Sbjct 340 TTGCCGGTCAAAGTCTT 356 Score = 118 bits (130), Expect = 3e-21 Identities = 101/125 (81%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||||||||| || || |||||||| || || || ||||||||||| || || |||||| Sbjct 4 CCAGCGAAGATCAGACGCTGTTGGTCAGGAGGGATGCCTTCCTTGTCCTGAATTTTTTGC 63 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 || || ||||| | |||||| | |||||||| | ||||||||||||||| |||||| Sbjct 64 TTGACGTTGTCGATCGAGTCTGAAGGCTCCACGTCCAGCGTGATCGTCTTGCCGGTCAAA 123 Query 225694 GTTTT 225698 || || Sbjct 124 GTCTT 128 >seq39983 Length=4479 Score = 141 bits (156), Expect = 2e-28 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||| || |||||||| || || || ||||||| ||||| ||| || ||| Sbjct 256 CGAAGACGCAGAACCAGGTGGAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGTA 197 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| || || ||||| || || || ||||| ||||| || || Sbjct 196 CGACCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCC 137 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| |||||||| ||||| | ||| || | |||||||| | Sbjct 136 TCCTTGTCCTGAATCTTCTGCTTCACGTTGTCGATCGAGTCCGACGGCTCCACGTCAAGG 77 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||||||||||| || || | ||| | ||||| Sbjct 76 GTAATGGTCTTGCCCGTCAGCGTCTTCACGAAGATCTGCAT 36 >seq11531 Length=597 Score = 138 bits (152), Expect = 3e-27 Identities = 180/243 (74%), Gaps = 7/243 (3%) Strand=Plus/Minus Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499 ||| ||||||||||| ||| ||| ||| ||||| || | ||||| | ||||||| | | Sbjct 250 AACTTTATATTTAATTTTTAGTGCTTTTGCTGGTGTTGTTGGTACAACATTTTCTCTTTT 191 Query 7500 TATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTA 7559 || || | |||||||| || ||| |||||| || | || ||| ||| | || Sbjct 190 AATTAGAATGGAATTAGCACAACCAGGTAATCAAATTTTTATGGGAAATCATCAATTATA 131 Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTAT 7619 || ||| || |||| || ||||| ||| ||||| ||| |||| |||||||| | | | Sbjct 130 TAATGTTGTTGTTACCGCACATGCTTTTATTATGGTTT--CTTTTAGTTATGCCTGCT-T 74 Query 7620 GATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTT 7679 || || |||| || ||||| || |||| |||||||| |||||||||||||||||||| Sbjct 73 AATCGGTGGTT--GGTAATTGGTT-ATTCC-TTAATGATAGGTGCTCCTGATATGGCTTT 18 Query 7680 TCC 7682 ||| Sbjct 17 TCC 15 >seq44488 Length=18910 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| ||||| || || || |||| ||||| ||| || ||| | || || Sbjct 18882 AGCACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGACCGTCC 18823 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || || ||||| ||||| || || |||||||| Sbjct 18822 TCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 18763 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| ||||| | ||| || | || || || | |||||| ||| Sbjct 18762 TGAATCTTAGACTTCACATTGTCGATCGAGTCCGACGGCTCTACATCGAGCGTGATAGTC 18703 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 |||||||||| || || | ||| | |||||||| Sbjct 18702 TTGCCCGTCAGCGTCTTCACGAAGATCTGCATTTT 18668 >seq39238 Length=3815 Score = 129 bits (142), Expect = 1e-24 Identities = 145/193 (75%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || |||| ||||| ||| || || | || || Sbjct 3577 AGCACCAGGTGAAGCGTTGACTCCTTCTGGATGTTGTAGTCGCTCAGCGTGCGGCCGTCC 3636 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || || || ||||||||||| Sbjct 3637 TCCAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 3696 Query 225622 TG-GATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 || || |||||||| || ||||| | |||||| | |||||||| | ||||||||| Sbjct 3697 TGTAATTTTTTGCTTGACGTTGTCGATCGAGTCTGAAGGCTCCACGTCCAGCGTGATCGT 3756 Query 225681 CTTGCCCGTCAAA 225693 |||||| || ||| Sbjct 3757 CTTGCCAGTTAAA 3769 >seq46230 Length=5243 Score = 123 bits (136), Expect = 6e-23 Identities = 97/116 (84%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 || ||||| || |||||||| || |||||||| || |||||||| ||||||||||| ||| Sbjct 4504 AAAATTTGTCCGTCAGTAATTGAAATAACATTAGTTGGGATATATGCAGAAACATCTCCT 4445 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATTTTTATT 4586 ||||||||||||| || |||||| ||||||| || |||||||| | ||| |||| Sbjct 4444 GCTTGTGTTTCGATAATAGGTAAAGCTGTTAAAGAACCACCACCTATTTTTCTATT 4389 Score = 84.2 bits (92), Expect = 5e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 5022 CAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATGGTAAA 5081 ||||| | || || || || ||||||| | |||| |||||||||||||||||||| ||| Sbjct 4179 CAATATTTAGCACCTTATACTGGTTGTGCTTTAGGTGAATATTTTAGAGATAATGGAAAA 4238 Query 5082 CATGCTTTAATCATCTACGATGATTTAAGTAAACAA 5117 |||||| | || | || ||||||||| |||||| Sbjct 4239 CATGCTGTTATTTTTTATGATGATTTATCAAAACAA 4274 >seq3294 Length=374 Score = 120 bits (132), Expect = 7e-22 Identities = 155/213 (73%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTT-TTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 || || ||||| ||||| || || || ||||| ||||| ||| || ||| | || || Sbjct 357 AGCACCAGGTGAAGAGTCGACTCCTTCTTGGATGTTGTAGTCGCTCAGAGTACGACCGTC 298 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || |||||||| || || ||||| || || || ||||| ||||| || || |||||||| Sbjct 297 CTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTC 238 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 || ||||| |||||| ||||| | ||| || | |||||||| | || || || Sbjct 237 CTGAATCTTAGACTTCACGTTGTCGATCGAGTCCGACGGCTCCACGTCAAGGGTAATGGT 178 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||||||||| || || | ||| | ||||| Sbjct 177 CTTGCCCGTCAGCGTCTTCACGAAGATCTGCAT 145 >seq43815 Length=14243 Score = 118 bits (130), Expect = 3e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| ||||||||||| || || || ||||| ||||| || || ||| Sbjct 5215 CCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGCGGGATTCCCTCC 5156 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| || || || ||||| ||| || ||| |||| || | |||||||| | |||| Sbjct 5155 TTGTCCTGAATTTTCTGCTTGACATTGTCAATGCTGTCGGACGGCTCCACGTCCAGCGTG 5096 Query 225676 ATCGTCTTGCCCGTCAAAGTTTT 225698 || |||||||||||||| || || Sbjct 5095 ATGGTCTTGCCCGTCAAGGTCTT 5073 >seq46232 Length=3510 Score = 114 bits (126), Expect = 3e-20 Identities = 102/125 (82%), Gaps = 6/125 (5%) Strand=Plus/Minus Query 6750 AGCCTTTTCCCTTTAACT----TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGC 6804 ||||| || ||||| || ||| |||||||||||||||||||||||||| | ||||| Sbjct 1301 AGCCTATTATCTTTAGCTGGTTTGAAAGAATGATCAGCCACATTGGGACTGAGACACGGC 1242 Query 6805 CCAAGTCTTCTAAAAGGGCAGCAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGA 6864 |||| || | ||||| ||||||||| |||| || ||||||| |||||||||||||| | Sbjct 1241 CCAAACTTTTTTAAAGG-CAGCAGTGGGGAATTTTGGACAATGAGCGAAAGCTTGATCCA 1183 Query 6865 GTAAT 6869 | ||| Sbjct 1182 GCAAT 1178 Score = 104 bits (114), Expect = 6e-17 Identities = 114/148 (77%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 7731 AGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACA 7790 || ||||||||| |||| |||| |||| ||||||||||||| ||||||||||| | | Sbjct 614 AGAGTTGGTAAGGTTCTGCGCGTATTATCGAATTAAACCACATGCTCCACCGCTTGTGTA 673 Query 7791 ATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAAT-ATT 7849 || |||||| || |||||| ||| || |||||| | || | ||||| ||| | || Sbjct 674 GACTCCCGTCAATTCCTTTGAATTTCAATCTTGCGATTATACTTTTCAGGCGGAGTGCTT 733 Query 7850 TACGCGTTAGCTTAATTA-ATATAAAAA 7876 ||||||||||| |||| || |||||| Sbjct 734 AACGCGTTAGCT--ATTATATCTAAAAA 759 >seq46228 Length=739 Score = 114 bits (126), Expect = 3e-20 Identities = 102/125 (82%), Gaps = 6/125 (5%) Strand=Plus/Minus Query 6750 AGCCTTTTCCCTTTAACT----TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGC 6804 ||||| || ||||| || ||| |||||||||||||||||||||||||| | ||||| Sbjct 496 AGCCTATTATCTTTAGCTGGTTTGAAAGAATGATCAGCCACATTGGGACTGAGACACGGC 437 Query 6805 CCAAGTCTTCTAAAAGGGCAGCAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGA 6864 |||| || | ||||| ||||||||| |||| || ||||||| |||||||||||||| | Sbjct 436 CCAAACTTTTTTAAAGG-CAGCAGTGGGGAATTTTGGACAATGAGCGAAAGCTTGATCCA 378 Query 6865 GTAAT 6869 | ||| Sbjct 377 GCAAT 373 >seq46237 Length=1078 Score = 105 bits (116), Expect = 2e-17 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAG 371424 || |||||| |||| | | ||||||||| ||||||||||| | || || | |||||| Sbjct 132 AAAGGTAATCTATGAAAACTTAAACCAGGAGCTCTCATATTATAAATTGTTGAAATAAAA 73 Query 371425 TTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATCG 371484 || ||||| |||| | |||||| ||||||| | |||||||||||| || |||||||| Sbjct 72 TTAATAGCACCTAATAAAGAAGAAATACCTGATAAATGTAAACTAAAAATAGCTAAATCT 13 Query 371485 ACGGAA 371490 || ||| Sbjct 12 ACAGAA 7 Score = 98.7 bits (108), Expect = 2e-15 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 || |||||||||||||| || |||| ||||||||| | | ||||| ||||| |||||| Sbjct 309 TCTGGATGACCAAAAAACCAAAATAGATGTTGATATAATACTGGATCACCTCCACCTGAT 250 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTA 370769 |||||| |||| ||| || |||||||||||||||| Sbjct 249 GGATCATAAAATGAAGTGTTTAAATTTCTATCAGTTA 213 >seq46233 Length=1259 Score = 102 bits (112), Expect = 2e-16 Identities = 74/86 (86%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 372622 TAGGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTT 372681 ||||||| ||| ||||| |||| ||||||||||| ||||||| ||||||| ||||| | Sbjct 875 TAGGTGTCACAAAATAGGGGGTTGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATG 816 Query 372682 GTAAAACGATGTATAGGGTCTGACAC 372707 |||| | ||||||||||||||||||| Sbjct 815 GTAACATGATGTATAGGGTCTGACAC 790 >seq19975 Length=892 Score = 102 bits (112), Expect = 2e-16 Identities = 84/99 (85%), Gaps = 5/99 (5%) Strand=Plus/Plus Query 6767 TTGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAGGGCAG 6825 |||| |||||||||||||||||||||||||| | ||||||||| || ||| ||||| Sbjct 13 TTGAAAGAATGATCAGCCACATTGGGACTGAGACACGGCCCAAACTTTTTAA---GGCAG 69 Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTT-GATCG 6863 |||||| |||| || ||||||| |||||||||| ||||| Sbjct 70 CAGTGGGGAATTTTGGACAATGAGCGAAAGCTTGGATCG 108 >seq42481 Length=8915 Score = 98.7 bits (108), Expect = 2e-15 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 4476 TTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCTGCTTG 4535 ||| |||| |||||| | |||||||| || |||||| | ||||||||||| || ||||| Sbjct 7811 TTGTCCATTAGTAATTGCTATAACATTAGTTGGGATACATGCAGAAACATCTCCCGCTTG 7870 Query 4536 TGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574 |||||||| || |||||| | ||||| || |||||||| Sbjct 7871 TGTTTCGATAATAGGTAAAGATGTTAAAGAACCACCACC 7909 >seq44758 Length=21441 Score = 87.8 bits (96), Expect = 4e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 4475 TTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCTGCTT 4534 |||| ||||||||||| || ||| |||| || ||||||| |||||||||| ||||||| Sbjct 3891 TTTGTCCATCAGTAATTGAAATAGCATTAGTTGGGATATTTGCAGAAACATTTCCTGCTT 3950 Query 4535 GTGTTTCGACAACAGGTA 4552 ||||||||| || ||||| Sbjct 3951 GTGTTTCGATAATAGGTA 3968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191824379304440