Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20infestans_20[genbank_20GCA_5F001661535.1_202016-06- 10] 46,260 sequences; 152,114,506 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq44985 114 1e-20 >seq44985 Length=24218 Score = 114 bits (126), Expect = 1e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 29648 AGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCC 29707 ||||||||||| |||| || || ||||| ||||| || | | ||||| |||||| || Sbjct 8404 AGCGGTTCCACATGGTTTAGATACACGTGTGCATCACCGATGACGTGGATAAACTCGCCA 8345 Query 29708 GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTA 29767 || | ||| || || || || || | || ||| || || | ||||||||||||||| Sbjct 8344 GGCTTTAGGCCTGTCACTTGTGCTACCAGTCGCGTAAGAAGCGCGTAGCTGGCGATGTTG 8285 Query 29768 AAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCG 29827 || || || || || |||||||| | || | ||| || | ||||| || | || || Sbjct 8284 AAAGGTACACCAAGTCCCATGTCGGCCGAGCGCTGATACATTTGGCAAGACAATTCCCCA 8225 Query 29828 TCGCTCACGTAAAACTGAC---ACATGGCATGGCACGGAGGAAGGGCCAT 29874 | | |||||| ||||| | ||||| |||||||| || || ||||| Sbjct 8224 TTGGCCACGTAGAACTGGCAGAACATG---TGGCACGGCGGCAGTGCCAT 8178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405934207726360