Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytophthora_20kernoviae_20[genbank_20GCA_5F000448265.2_202016-06- 02] 5,026 sequences; 39,481,229 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq4401 113 4e-20 >seq4401 Length=89758 Score = 113 bits (124), Expect = 4e-20 Identities = 280/423 (66%), Gaps = 4/423 (1%) Strand=Plus/Plus Query 20225 TGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACA 20284 |||| || ||||||||||| || ||| | || |||||||| | || || ||| | Sbjct 88313 TGGGACCAGTGTATGGATTCCAGTGGCGTCACTTTGGAGCCAAGTACACGGATATGCATG 88372 Query 20285 CAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACGA 20344 || | || |||||| || || |||||| | | || || | | | || | Sbjct 88373 CAGACTACACTGGACAGGGGGTGGATCAACTTGCTGAGGTGATCCACAAACTACGCACAA 88432 Query 20345 ACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGG 20404 |||| | |||| | | ||| | || | || ||||| | ||| | | |||| Sbjct 88433 ACCCGACCGACCGTCGGATTGTGTTGTCTGCGTGGAATCCAGCGGATCTCAATGAGATGG 88492 Query 20405 CTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGTGTC 20464 | |||| |||||||| ||| | || || |||||||| || || || || ||||||| Sbjct 88493 CGCTGCCACCATGTCACATGTTTTGTCAGTTTTACGTGGCGGATGGCGAGTTATCGTGTC 88552 Query 20465 AAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATG 20524 | ||||| || || || ||||| ||||| || || || || ||||| || || ||||||| Sbjct 88553 AGATGTACCAGCGTTCGGCTGACATGGGCCTCGGCGTGCCGTTCAACATCGCCAGTTATG 88612 Query 20525 CGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACA 20584 |||| || ||| | | || || || | | ||| ||| | || || || |||||| Sbjct 88613 CGCTACTGACGCGACTTGTGGCCCAAGTGGCTGGTTTGAAACCTGGCGAATTTATCCACA 88672 Query 20585 CCATAGGAGACGCGCATATTTACCTTAATCATATAGAAC--CTTTAAAATTACAGTTAAC 20642 || || || || || | ||||| || || |||| | ||| |||| |||| |||| Sbjct 88673 TTATTGGTGATGCACACGTATACCTGAACCACGTAGAGCCGCTTCAAAA--ACAGCTAAC 88730 Query 20643 ACG 20645 || Sbjct 88731 GCG 88733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399159548233570